BLASTX nr result

ID: Coptis21_contig00016164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016164
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...    90   5e-16
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13
ref|XP_002531334.1| conserved hypothetical protein [Ricinus comm...    80   5e-13
gb|EEC78398.1| hypothetical protein OsI_18185 [Oryza sativa Indi...    79   1e-12
gb|AAS75247.1| unknown protein [Oryza sativa Japonica Group] gi|...    76   7e-12

>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
 Frame = +2

Query: 185 SLPTFTKPVSAMKGSRERVGIPLKKLSVTWAPDVYDPLCNSISHMVKS--HNSQRSRNKK 358
           SLPT  K VSAMKGSR++ GIPLKKL+VTWAPDVYDP    +SH V++     Q   N+K
Sbjct: 148 SLPTPLKLVSAMKGSRDKEGIPLKKLNVTWAPDVYDPPPTIVSHTVRNCKKQQQSKNNRK 207

Query: 359 DSKHRHKGKSSQGSNSYKK 415
           + KH+ KGK+++GSN   K
Sbjct: 208 NGKHKQKGKAARGSNGKDK 226


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
 Frame = +2

Query: 86  EKDEEKASNLVSLDEKD-DISLHMKSHRESECPVSLPTFTKPVSAMKGSRERVGIPLKKL 262
           +K  + +S++   DE+D +    ++     E P    T    VSAMKGSRE+ G   +KL
Sbjct: 57  KKRHDNSSSMAPSDEEDNEPETGLQLLFPEEFPHLNSTRLPIVSAMKGSREKQGGSPRKL 116

Query: 263 SVTWAPDVYDPLCNSISHMVKSHNSQRSR---------NKKDSKHRHKGKSSQG-----S 400
           +V+WAPDVYDP+ NS+SH VKS   + SR         NKK+ K   KG SS+G      
Sbjct: 117 TVSWAPDVYDPIPNSLSHSVKSKQKKSSRKDRDKDNNHNKKNGKKGQKGSSSKGLGGKDK 176

Query: 401 NSYKKHAGKTD--YRLKSSPTSARLSYPSSARLFYGDYNQTKFGSSFLRTS 547
             ++K  G++D  Y+   +P        S       DY     GSSFL+ S
Sbjct: 177 KQFRKSGGRSDKCYKTMDAPEDTDFGVGSP------DY----CGSSFLKNS 217


>ref|XP_002531334.1| conserved hypothetical protein [Ricinus communis]
           gi|223529056|gb|EEF31041.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
 Frame = +2

Query: 122 LDEKDDISLHMKSHRESECPVSLPTFTKPVSAMKGSRERVGIPLKKLSVTWAPDVYDPLC 301
           L E+DD          SE P+        VSAMKGSRE++G  L+KL+V+WAPDVYDP+ 
Sbjct: 73  LVEEDDEPETAMQQLSSEGPIQPAVLL--VSAMKGSREKLGASLRKLTVSWAPDVYDPIP 130

Query: 302 NSISHMVKSHNSQ----RSRNKKDSKHRHKGKSSQGSNS----------YKKHAGKTDYR 439
           NS+SH VKS   +    R R+K+ + ++  GK  Q  NS           +K  G++D  
Sbjct: 131 NSLSHTVKSKQKKSKKDRDRDKESNNYKKNGKRGQKGNSRGGGGKDKKQLRKAGGRSDRG 190

Query: 440 LKSSPTSARLSYPSSARLFYGDYNQTKFGSSFLRTS 547
            K+   S          +   DY     GSSFL+ S
Sbjct: 191 YKTLSISESPDNLDEFNVGSPDY----CGSSFLKKS 222


>gb|EEC78398.1| hypothetical protein OsI_18185 [Oryza sativa Indica Group]
          Length = 264

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 57/146 (39%), Positives = 75/146 (51%), Gaps = 21/146 (14%)
 Frame = +2

Query: 173 ECPVSLPTFTKPVSAMKGSRERVGI--PLKKLSVTWAPDVYDPLCNSISHMVKSHNSQRS 346
           E  VSLP   K +SAMKGSR++ G+  P +   V WAPDVYDP   S+ H V +   +RS
Sbjct: 108 ERSVSLPPTLKIISAMKGSRQKNGMASPTESRHVKWAPDVYDPPVTSVCHSVNNSYQRRS 167

Query: 347 RNKKDSKHRHKGKSSQGSNSYKKH------------AGKTDYRLKSSPTSARLSYPSSAR 490
           +++K  K++ K K  Q   S K H             G+ D RLK + T++  S P    
Sbjct: 168 KSRKKDKNKQKQKQKQKGRSKKNHQNAIQSSAVLQAPGEFD-RLKDAETTSSNSAPDDLN 226

Query: 491 ------LFYGDYNQ-TKFGSSFLRTS 547
                 L YG  +Q  K GSSFLR S
Sbjct: 227 KHETDILDYGISSQDAKCGSSFLRES 252


>gb|AAS75247.1| unknown protein [Oryza sativa Japonica Group]
           gi|215701500|dbj|BAG92924.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629960|gb|EEE62092.1| hypothetical protein
           OsJ_16876 [Oryza sativa Japonica Group]
          Length = 264

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 57/146 (39%), Positives = 74/146 (50%), Gaps = 21/146 (14%)
 Frame = +2

Query: 173 ECPVSLPTFTKPVSAMKGSRERVGIPLKKLS--VTWAPDVYDPLCNSISHMVKSHNSQRS 346
           E  VSLP   K +SAMKGSR++ G+     S  V WAPDVYDP   S+ H V +   +RS
Sbjct: 108 ERSVSLPPTLKIISAMKGSRQKNGMASSTESRHVKWAPDVYDPPVTSVCHSVNNSYQRRS 167

Query: 347 RNKKDSKHRHKGKSSQGSNSYKKH------------AGKTDYRLKSSPTSARLSYPSSAR 490
           +++K  K++ K K  Q   S K H             G+ D RLK + T++  S P    
Sbjct: 168 KSRKKDKNKQKQKQKQKGRSKKNHQNAIQSSAVLQAPGEFD-RLKDAETTSSNSAPDDLN 226

Query: 491 ------LFYGDYNQ-TKFGSSFLRTS 547
                 L YG  +Q  K GSSFLR S
Sbjct: 227 KHETDILDYGISSQDAKCGSSFLRES 252


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