BLASTX nr result

ID: Coptis21_contig00016158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016158
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_003525913.1| PREDICTED: uncharacterized protein LOC100801...   197   6e-49
ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [...   194   6e-48
ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [...   192   2e-47

>ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  202 bits (515), Expect = 2e-50
 Identities = 95/132 (71%), Positives = 105/132 (79%)
 Frame = +3

Query: 3   YLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLKLAVTLFFLARCGGSITVWKMA 182
           Y++GE EAIWLL L+LPY N          SGDPATT+K+AV LF  ARCG SIT+WKMA
Sbjct: 346 YVLGEGEAIWLLKLVLPYLNECLLKIRALFSGDPATTMKMAVLLFVFARCGSSITIWKMA 405

Query: 183 KLGFFAVFTVPKVCSSYSTQLTAYGNFWIRRFCDAWNSCKHKKAVAAAIFTLVWNLSSVS 362
           +LGFF VFTVPKVCSSYSTQLTAYG FWIRRF DAW SC HKKAVA  IFTLVWNLSS+ 
Sbjct: 406 RLGFFGVFTVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALCIFTLVWNLSSMV 465

Query: 363 ARVWAAFMLVVA 398
           AR+WA FM+ VA
Sbjct: 466 ARIWAVFMMFVA 477


>ref|XP_003525913.1| PREDICTED: uncharacterized protein LOC100801188 [Glycine max]
          Length = 643

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/132 (71%), Positives = 102/132 (77%)
 Frame = +3

Query: 3   YLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLKLAVTLFFLARCGGSITVWKMA 182
           Y+VGEE+AIW+L LILPY N          SGDP TT+KLAV LF LARCG  ITVWKMA
Sbjct: 461 YVVGEEDAIWMLKLILPYLNEFLSKLKALFSGDPGTTIKLAVLLFVLARCGSYITVWKMA 520

Query: 183 KLGFFAVFTVPKVCSSYSTQLTAYGNFWIRRFCDAWNSCKHKKAVAAAIFTLVWNLSSVS 362
           K GFF VFTVPK+CSSYS QLT YGNFWIRRF DAW+SC HKKAVA  IF LVWNLSSV 
Sbjct: 521 KFGFFGVFTVPKICSSYSAQLTEYGNFWIRRFRDAWDSCTHKKAVALGIFGLVWNLSSVV 580

Query: 363 ARVWAAFMLVVA 398
           AR+WA F+L  A
Sbjct: 581 ARIWAVFVLFAA 592


>ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|222855317|gb|EEE92864.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/136 (69%), Positives = 105/136 (77%), Gaps = 4/136 (2%)
 Frame = +3

Query: 3   YLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLK----LAVTLFFLARCGGSITV 170
           Y+VGE EAIWLL L+LPY N          SGDP+TT+K    +AV LF LARCG SIT+
Sbjct: 537 YVVGEGEAIWLLKLVLPYLNECLLKIRALFSGDPSTTMKASSLMAVLLFVLARCGSSITI 596

Query: 171 WKMAKLGFFAVFTVPKVCSSYSTQLTAYGNFWIRRFCDAWNSCKHKKAVAAAIFTLVWNL 350
           WKMAKLGFF VF VPKVCSSYSTQLTAYG FWIRRF DAW SC HKKAVA  IF+LVWNL
Sbjct: 597 WKMAKLGFFGVFIVPKVCSSYSTQLTAYGKFWIRRFRDAWESCSHKKAVALGIFSLVWNL 656

Query: 351 SSVSARVWAAFMLVVA 398
           SS+ AR+WA FM+ VA
Sbjct: 657 SSMVARIWAVFMMFVA 672


>ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 608

 Score =  194 bits (493), Expect = 6e-48
 Identities = 92/132 (69%), Positives = 102/132 (77%)
 Frame = +3

Query: 3   YLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLKLAVTLFFLARCGGSITVWKMA 182
           Y++GEEEAIW+L LILPY N          SGDP TT+KLAV LF LARCG SIT+WKMA
Sbjct: 423 YVLGEEEAIWVLRLILPYLNEFLSKLRAMFSGDPGTTIKLAVLLFVLARCGSSITIWKMA 482

Query: 183 KLGFFAVFTVPKVCSSYSTQLTAYGNFWIRRFCDAWNSCKHKKAVAAAIFTLVWNLSSVS 362
           K GFF VFT PK+CSSYS QLTA+ NFWIRRF DAW SC HKKAVA  IF LVWNLSSV 
Sbjct: 483 KFGFFGVFTGPKICSSYSAQLTAFANFWIRRFRDAWVSCSHKKAVALGIFGLVWNLSSVV 542

Query: 363 ARVWAAFMLVVA 398
           AR+W+ F+L VA
Sbjct: 543 ARIWSVFVLFVA 554


>ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 589

 Score =  192 bits (489), Expect = 2e-47
 Identities = 91/132 (68%), Positives = 102/132 (77%)
 Frame = +3

Query: 3   YLVGEEEAIWLLHLILPYFNXXXXXXXXXXSGDPATTLKLAVTLFFLARCGGSITVWKMA 182
           Y++ EEEAIW+L LILPY N          SGDP TT+KLAV LF LARCG  IT+WKMA
Sbjct: 404 YVLREEEAIWVLKLILPYLNEFLSKLRAMFSGDPGTTIKLAVLLFVLARCGSYITIWKMA 463

Query: 183 KLGFFAVFTVPKVCSSYSTQLTAYGNFWIRRFCDAWNSCKHKKAVAAAIFTLVWNLSSVS 362
           K GFF VFTVPK+CSSYS QLTA+ NFWIRRF DAW+SC HKKAVA  IF LVWNLSSV 
Sbjct: 464 KFGFFGVFTVPKICSSYSAQLTAFANFWIRRFRDAWDSCSHKKAVALGIFGLVWNLSSVV 523

Query: 363 ARVWAAFMLVVA 398
           AR+W+ F+L VA
Sbjct: 524 ARIWSVFVLFVA 535