BLASTX nr result

ID: Coptis21_contig00016156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016156
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [...   114   2e-23
ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [...   114   2e-23
ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [...   110   5e-22
ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [...   110   5e-22
ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21

>ref|XP_004161870.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  114 bits (285), Expect = 2e-23
 Identities = 77/223 (34%), Positives = 110/223 (49%)
 Frame = +3

Query: 114 ETPSTRSDSYNCNDLGVCIEKLNSNSLRTEEQIEIERXXXXXXXXXXXXXXXXXXXXXXX 293
           E P   +++Y C + GVC+    +  ++  +++ I                         
Sbjct: 179 EKPQVENETY-CKEFGVCLISTMAGPIKPTQEVSIN--DNENEANEEEETEEEEEDGDDN 235

Query: 294 XXXXQSFDVKEVDIQQVEHKKVVNEENNKVDLIHVEKPPLISSNLIRPSPQVSYNARINP 473
               +SFD+KE+++   E KK+VNE   K   I+ EKP                     P
Sbjct: 236 EIEKESFDIKEINLP--EPKKIVNEVK-KFHQIY-EKPV--------------------P 271

Query: 474 ESTKAPPVWDEFERLQETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFS 653
            S+K      E+   QE  +KLQ++VDL+MWK+V +SAFV             T D+N S
Sbjct: 272 HSSKPTYTSKEYHNFQEKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISCSYTNDINIS 331

Query: 654 LISAVSYVGLFYLAATFFYKSILCRGSIDVDEDSNQRYLVGEE 782
            IS VSYVGLFYLAATF Y+SI+CRG+ID++   N R +VGEE
Sbjct: 332 FISVVSYVGLFYLAATFLYRSIICRGAIDME---NVRNVVGEE 371


>ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 608

 Score =  114 bits (285), Expect = 2e-23
 Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
 Frame = +3

Query: 30  RKTKSALDKRXXXXXXXXXXXXXXKNQSETPSTRSDSYNCNDLGVCIEKLNSNSLRTEEQ 209
           RK K  LD                +N  +     SD  NC D GVC+EK+ S++      
Sbjct: 159 RKDKPELDHVLNESRNDGLAGGSGRNVIDNGKNDSDG-NCKDFGVCLEKVISSNSDNVGM 217

Query: 210 IEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXQSFDVKEVDI------QQVEHKKVVNEE 371
           I+                               SFDVKE+ +       + E K+VVN  
Sbjct: 218 IKCSPVHVDGDFDDVVVDDEEEDEEIDVEMEKGSFDVKEISVPESKVVNEPERKEVVNVP 277

Query: 372 NNKVDLIHVEKPPLISSN---------------LIRPSPQVSYNARINPESTKAP--PVW 500
             +  +   E   ++++N                ++PSP +   + I+   +KA   P  
Sbjct: 278 AKQKIVNEPEPKKVVTTNRQFHQKNERPVSIPIAVKPSPPIRKLSTIHQNFSKADSIPKA 337

Query: 501 DEFERLQETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFSLISAVSYVG 680
           +E+    ++Q+KLQ++VDL+MW++V +SAF+              KD+N SLIS +SY+G
Sbjct: 338 EEYYCFPQSQNKLQSLVDLIMWREVSRSAFIFGIGTFTIVSSSYAKDINLSLISVMSYIG 397

Query: 681 LFYLAATFFYKSILCRGSIDVDEDSNQRYLVGEE 782
           L YLA  F Y+S++CRG IDVD+ +   Y++GEE
Sbjct: 398 LVYLAVIFLYRSLICRGVIDVDDTN---YVLGEE 428


>ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  110 bits (274), Expect = 5e-22
 Identities = 76/223 (34%), Positives = 109/223 (48%)
 Frame = +3

Query: 114 ETPSTRSDSYNCNDLGVCIEKLNSNSLRTEEQIEIERXXXXXXXXXXXXXXXXXXXXXXX 293
           E P   +++Y C + GVC+    +  ++  +++ I                         
Sbjct: 179 EKPQVENETY-CKEFGVCLISTMAGPIKPTQEVSIN--DNENEANEEEETEEEEEDGDDN 235

Query: 294 XXXXQSFDVKEVDIQQVEHKKVVNEENNKVDLIHVEKPPLISSNLIRPSPQVSYNARINP 473
               +SFD+KE+++   E KK+VNE   K   I+ EKP                     P
Sbjct: 236 EIEKESFDIKEINLP--EPKKIVNEVK-KFHQIY-EKPV--------------------P 271

Query: 474 ESTKAPPVWDEFERLQETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFS 653
            S+K      E+   QE  +KLQ++VDL+MWK+V +SAFV             T D+N S
Sbjct: 272 HSSKPTYTSKEYHNFQEKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYTNDINIS 331

Query: 654 LISAVSYVGLFYLAATFFYKSILCRGSIDVDEDSNQRYLVGEE 782
            IS VSYVGLFYLAATF Y+SI+ RG+ID++   N R +VGEE
Sbjct: 332 FISVVSYVGLFYLAATFLYRSIIYRGAIDME---NVRNVVGEE 371


>ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 589

 Score =  110 bits (274), Expect = 5e-22
 Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 8/221 (3%)
 Frame = +3

Query: 144 NCNDLGVCIEKLNSNSLRTEEQIEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXQSFDVK 323
           NC D GVC+EK+ S++      I+                               SFDVK
Sbjct: 197 NCKDFGVCLEKVISSNSGNVGMIKCSPVHVDDDDEDDVVEEEVDDEEIDIEMEKGSFDVK 256

Query: 324 EVDIQQVEHKKVVNEENNKVDLIHVEKPPLISSNLIRPSPQVSYNARINPESTK------ 485
           E+ + +    KVVNE   K  +    K  ++  N   P   VS N + + ++ +      
Sbjct: 257 EISVPE---SKVVNETERKEVVNVAAKQKIV--NEPEPKKVVSTNRQFHQKNERPVLIGL 311

Query: 486 --APPVWDEFERLQETQSKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXXXTKDLNFSLI 659
             + P  +E+    ++Q+KLQ++VDL+MW+D+ +SAF+              KD+N SLI
Sbjct: 312 YYSVPKAEEYCSFPQSQNKLQSLVDLIMWRDISRSAFIFGIGTFAIVLSSYAKDINLSLI 371

Query: 660 SAVSYVGLFYLAATFFYKSILCRGSIDVDEDSNQRYLVGEE 782
           S +SY+GL YLA  F Y+S++CRG IDV ED+N  Y++ EE
Sbjct: 372 SVMSYIGLVYLAVIFLYRSLICRGVIDV-EDTN--YVLREE 409


>ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  108 bits (269), Expect = 2e-21
 Identities = 65/170 (38%), Positives = 98/170 (57%), Gaps = 12/170 (7%)
 Frame = +3

Query: 306 QSFDVKEVDIQQVEHKKVV-NEENNKV----DLIHVEKPPLIS-----SNLIRPSPQVSY 455
           +S D+KE++I + + KKV  N+ NN+      +++ + PP+I       NL + +P  S 
Sbjct: 195 KSLDIKEINIAEEKPKKVEKNQFNNRTAPASSIVNKQPPPVIKRATLYQNLAKAAPNPSI 254

Query: 456 NARINPESTKAPPVWDEFERLQETQ--SKLQNIVDLVMWKDVPKSAFVXXXXXXXXXXXX 629
                       PV +E++  +ET+  SKLQN+VDLVMW+DV +S               
Sbjct: 255 ------------PVANEYQNFKETRRHSKLQNLVDLVMWRDVSRSTLAFGMGTFIIISSS 302

Query: 630 XTKDLNFSLISAVSYVGLFYLAATFFYKSILCRGSIDVDEDSNQRYLVGE 779
            TKDLN S IS +SY+GL YLA  F Y+S++CRG ID+D+D +  Y++GE
Sbjct: 303 YTKDLNVSFISVMSYLGLVYLATIFLYRSLICRGVIDIDDDGS--YVLGE 350


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