BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016145
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   656   0.0  
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   656   0.0  
ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis tha...   625   e-176
ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis tha...   625   e-176
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni...   624   e-176

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
            gi|297739835|emb|CBI30017.3| unnamed protein product
            [Vitis vinifera]
          Length = 439

 Score =  656 bits (1692), Expect = 0.0
 Identities = 311/388 (80%), Positives = 353/388 (90%)
 Frame = +1

Query: 55   IYSFVANTWKPHLPICTVLGLEKGKECIVVGTLYKHMKLKPCILDDYSKERSVLPIVKPH 234
            IYS + N WKPHLP+CTVLGLE+GKECI+VGTLYKHMKLKPCILD+YSKERSV P+VKPH
Sbjct: 50   IYSLIPN-WKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPH 108

Query: 235  NFMHADDQLILEDESGRVKLGGTMLSPSFFVTGVVVALHGSETSAGEFVVQDILEAGLPP 414
            NFMH+DD L+LEDESGRVKLGGTML PS +VTG VV LHG ETSAGEF+VQDIL+A LPP
Sbjct: 109  NFMHSDDSLVLEDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPP 168

Query: 415  QIELPLDLGEDKYVVFVSGLSVGNDMSNPLEFQLLVDHITGHLGDDKEQLIASQIVRVVI 594
            QIELPL   EDKYVVFVSGLSVG+  SNPL+FQLLVDHITGHLGD+KEQ IA+QIV VVI
Sbjct: 169  QIELPLKSREDKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVI 228

Query: 595  AGNSVEVQHGLLNGKPMAAKEQSRLSEPVKELDILLTQLAVAVPLDIMPGLNDPANFALP 774
            AGNSV V  GLLNG+ +A+K+QSRLSEP+KELDILLTQ+A  +PLDIMPG +DPANF+LP
Sbjct: 229  AGNSVAVPRGLLNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLP 288

Query: 775  QQPLHRCLFRGASVYNTFQSCTNPHLFEVDNIRFLGTSGQNIDDLDKYAEAKDRLDFMER 954
            QQPLHRCLF G+S YN+F+SCTNPH FE++NIRFLGTSGQN+DDL+KY+EAKD+L+FMER
Sbjct: 289  QQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMER 348

Query: 955  TLTWRHIAPTTPNTLGCYPFTDRDPFLIESCPNVYFVGNQNKYETRLAKGSEGQLVRLIC 1134
            TL WRH+APT PNTLGCYPFTDRDPFLIESCP+VYFVGNQ+KYETRL KGSEGQ+VRLIC
Sbjct: 349  TLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLIC 408

Query: 1135 IPKFSESGVAVMLNLRNFECHTLSFATQ 1218
            IPKF E+GVAV+LN+RN ECH LSF T+
Sbjct: 409  IPKFCETGVAVVLNMRNLECHALSFGTE 436


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  656 bits (1692), Expect = 0.0
 Identities = 311/388 (80%), Positives = 353/388 (90%)
 Frame = +1

Query: 55   IYSFVANTWKPHLPICTVLGLEKGKECIVVGTLYKHMKLKPCILDDYSKERSVLPIVKPH 234
            IYS + N WKPHLP+CTVLGLE+GKECI+VGTLYKHMKLKPCILD+YSKERSV P+VKPH
Sbjct: 50   IYSLIPN-WKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPH 108

Query: 235  NFMHADDQLILEDESGRVKLGGTMLSPSFFVTGVVVALHGSETSAGEFVVQDILEAGLPP 414
            NFMH+DD L+LEDESGRVKLGGTML PS +VTG VV LHG ETSAGEF+VQDIL+A LPP
Sbjct: 109  NFMHSDDSLVLEDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPP 168

Query: 415  QIELPLDLGEDKYVVFVSGLSVGNDMSNPLEFQLLVDHITGHLGDDKEQLIASQIVRVVI 594
            QIELPL   EDKYVVFVSGLSVG+  SNPL+FQLLVDHITGHLGD+KEQ IA+QIV VVI
Sbjct: 169  QIELPLKSREDKYVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVI 228

Query: 595  AGNSVEVQHGLLNGKPMAAKEQSRLSEPVKELDILLTQLAVAVPLDIMPGLNDPANFALP 774
            AGNSV V  GLLNG+ +A+K+QSRLSEP+KELDILLTQ+A  +PLDIMPG +DPANF+LP
Sbjct: 229  AGNSVAVPRGLLNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLP 288

Query: 775  QQPLHRCLFRGASVYNTFQSCTNPHLFEVDNIRFLGTSGQNIDDLDKYAEAKDRLDFMER 954
            QQPLHRCLF G+S YN+F+SCTNPH FE++NIRFLGTSGQN+DDL+KY+EAKD+L+FMER
Sbjct: 289  QQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMER 348

Query: 955  TLTWRHIAPTTPNTLGCYPFTDRDPFLIESCPNVYFVGNQNKYETRLAKGSEGQLVRLIC 1134
            TL WRH+APT PNTLGCYPFTDRDPFLIESCP+VYFVGNQ+KYETRL KGSEGQ+VRLIC
Sbjct: 349  TLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLIC 408

Query: 1135 IPKFSESGVAVMLNLRNFECHTLSFATQ 1218
            IPKF E+GVAV+LN+RN ECH LSF T+
Sbjct: 409  IPKFCETGVAVVLNMRNLECHALSFGTE 436


>ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
            gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit
            2 [Arabidopsis thaliana]
          Length = 441

 Score =  625 bits (1611), Expect = e-176
 Identities = 293/390 (75%), Positives = 344/390 (88%)
 Frame = +1

Query: 52   TIYSFVANTWKPHLPICTVLGLEKGKECIVVGTLYKHMKLKPCILDDYSKERSVLPIVKP 231
            T+   +A TWK HLP+C VLGLEKGKECI+VGTL+KHMKLKPC+LD+YSKERSV P+VKP
Sbjct: 49   TLLYSLAPTWKSHLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKP 108

Query: 232  HNFMHADDQLILEDESGRVKLGGTMLSPSFFVTGVVVALHGSETSAGEFVVQDILEAGLP 411
            HNFMH DD LILEDESGRVKL G+ LSP+ +VTGVVVALHG ET+AGEF V+D+LEAGLP
Sbjct: 109  HNFMHPDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLP 168

Query: 412  PQIELPLDLGEDKYVVFVSGLSVGNDMSNPLEFQLLVDHITGHLGDDKEQLIASQIVRVV 591
            PQIE P+DL EDKYVV +SGL +G+  +NPL+FQLLVDHITGHLGD++EQ +A+QIV VV
Sbjct: 169  PQIERPIDLQEDKYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVV 228

Query: 592  IAGNSVEVQHGLLNGKPMAAKEQSRLSEPVKELDILLTQLAVAVPLDIMPGLNDPANFAL 771
            IAGNS E    L+NG+ +A+K+QS L EP+KELDI+L+Q+A  V +DIMPG NDPANFAL
Sbjct: 229  IAGNSFEFPRKLINGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFAL 288

Query: 772  PQQPLHRCLFRGASVYNTFQSCTNPHLFEVDNIRFLGTSGQNIDDLDKYAEAKDRLDFME 951
            PQQPL+RCLF G+S YNTF+SCTNPH F+VDNIRFLGTSGQNIDDL KY+EAK +LDF+E
Sbjct: 289  PQQPLNRCLFPGSSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVE 348

Query: 952  RTLTWRHIAPTTPNTLGCYPFTDRDPFLIESCPNVYFVGNQNKYETRLAKGSEGQLVRLI 1131
            RTL WRH+APT PNTLGCYPFTDRDPFLIE+CP+VYFVGNQ+KY+ RL KGSEGQLVRLI
Sbjct: 349  RTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLI 408

Query: 1132 CIPKFSESGVAVMLNLRNFECHTLSFATQM 1221
            CIPKF E+G+AV +NLRN ECHTLSF+TQ+
Sbjct: 409  CIPKFCETGIAVAVNLRNLECHTLSFSTQI 438


>ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
            gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA
            polymerase delta small subunit gi|22531160|gb|AAM97084.1|
            putative DNA polymerase delta small subunit [Arabidopsis
            thaliana] gi|31376377|gb|AAP49515.1| At2g42120
            [Arabidopsis thaliana] gi|62320658|dbj|BAD95325.1| DNA
            polymerase delta small subunit like protein [Arabidopsis
            thaliana] gi|330254978|gb|AEC10072.1| DNA polymerase
            delta subunit 2 [Arabidopsis thaliana]
          Length = 440

 Score =  625 bits (1611), Expect = e-176
 Identities = 293/390 (75%), Positives = 344/390 (88%)
 Frame = +1

Query: 52   TIYSFVANTWKPHLPICTVLGLEKGKECIVVGTLYKHMKLKPCILDDYSKERSVLPIVKP 231
            T+   +A TWK HLP+C VLGLEKGKECI+VGTL+KHMKLKPC+LD+YSKERSV P+VKP
Sbjct: 48   TLLYSLAPTWKSHLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKP 107

Query: 232  HNFMHADDQLILEDESGRVKLGGTMLSPSFFVTGVVVALHGSETSAGEFVVQDILEAGLP 411
            HNFMH DD LILEDESGRVKL G+ LSP+ +VTGVVVALHG ET+AGEF V+D+LEAGLP
Sbjct: 108  HNFMHPDDNLILEDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLP 167

Query: 412  PQIELPLDLGEDKYVVFVSGLSVGNDMSNPLEFQLLVDHITGHLGDDKEQLIASQIVRVV 591
            PQIE P+DL EDKYVV +SGL +G+  +NPL+FQLLVDHITGHLGD++EQ +A+QIV VV
Sbjct: 168  PQIERPIDLQEDKYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVV 227

Query: 592  IAGNSVEVQHGLLNGKPMAAKEQSRLSEPVKELDILLTQLAVAVPLDIMPGLNDPANFAL 771
            IAGNS E    L+NG+ +A+K+QS L EP+KELDI+L+Q+A  V +DIMPG NDPANFAL
Sbjct: 228  IAGNSFEFPRKLINGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFAL 287

Query: 772  PQQPLHRCLFRGASVYNTFQSCTNPHLFEVDNIRFLGTSGQNIDDLDKYAEAKDRLDFME 951
            PQQPL+RCLF G+S YNTF+SCTNPH F+VDNIRFLGTSGQNIDDL KY+EAK +LDF+E
Sbjct: 288  PQQPLNRCLFPGSSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVE 347

Query: 952  RTLTWRHIAPTTPNTLGCYPFTDRDPFLIESCPNVYFVGNQNKYETRLAKGSEGQLVRLI 1131
            RTL WRH+APT PNTLGCYPFTDRDPFLIE+CP+VYFVGNQ+KY+ RL KGSEGQLVRLI
Sbjct: 348  RTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLI 407

Query: 1132 CIPKFSESGVAVMLNLRNFECHTLSFATQM 1221
            CIPKF E+G+AV +NLRN ECHTLSF+TQ+
Sbjct: 408  CIPKFCETGIAVAVNLRNLECHTLSFSTQI 437


>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  624 bits (1610), Expect = e-176
 Identities = 290/388 (74%), Positives = 347/388 (89%)
 Frame = +1

Query: 55   IYSFVANTWKPHLPICTVLGLEKGKECIVVGTLYKHMKLKPCILDDYSKERSVLPIVKPH 234
            +YS V + WKP+ P+CTVLGLE+GKEC++VGTLYKHMKLKPCILD+YSKERSV+P+VKPH
Sbjct: 44   LYSLVPH-WKPNFPVCTVLGLEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPH 102

Query: 235  NFMHADDQLILEDESGRVKLGGTMLSPSFFVTGVVVALHGSETSAGEFVVQDILEAGLPP 414
            NF+H DD L+LEDESGRVKL G+++ PS +VTG+VVAL G ET AG+F+VQD+L+AGLPP
Sbjct: 103  NFIHPDDHLVLEDESGRVKLSGSIILPSEYVTGIVVALLGKETGAGDFLVQDVLDAGLPP 162

Query: 415  QIELPLDLGEDKYVVFVSGLSVGNDMSNPLEFQLLVDHITGHLGDDKEQLIASQIVRVVI 594
            QIE PL   EDKYVV VSGLSVG+  SNPL+FQLL+DHITGHLGD+KEQ IASQIVRVV 
Sbjct: 163  QIEFPLKPREDKYVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIVRVVF 222

Query: 595  AGNSVEVQHGLLNGKPMAAKEQSRLSEPVKELDILLTQLAVAVPLDIMPGLNDPANFALP 774
            AGN VE+   LLNG+ +A+K+ SR++EP+KELDILL+Q+A  +PLDIMPG +DPANF+LP
Sbjct: 223  AGNLVEIPRRLLNGQNLASKDLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSLP 282

Query: 775  QQPLHRCLFRGASVYNTFQSCTNPHLFEVDNIRFLGTSGQNIDDLDKYAEAKDRLDFMER 954
            QQ LHRCLF G+S YNTF+SCTNPH FEVDN+RFLGTSGQN+DDL+KY+EAKD+L+FMER
Sbjct: 283  QQSLHRCLFPGSSAYNTFRSCTNPHCFEVDNVRFLGTSGQNVDDLEKYSEAKDKLEFMER 342

Query: 955  TLTWRHIAPTTPNTLGCYPFTDRDPFLIESCPNVYFVGNQNKYETRLAKGSEGQLVRLIC 1134
            TL WRH+APT PNTLGCYP+TD+DPF IESCP+VYFVGNQ+K+ETR+ KGSEGQLVRLIC
Sbjct: 343  TLRWRHLAPTAPNTLGCYPYTDKDPFFIESCPHVYFVGNQDKFETRVIKGSEGQLVRLIC 402

Query: 1135 IPKFSESGVAVMLNLRNFECHTLSFATQ 1218
            +PKFSE+GVAVMLNLR+ +CH LSF TQ
Sbjct: 403  VPKFSETGVAVMLNLRDLDCHALSFGTQ 430