BLASTX nr result

ID: Coptis21_contig00016135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016135
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38794.1| Putative hAT family dimerisation domain containin...   117   2e-24
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...   109   8e-22
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...   107   4e-21
ref|XP_002440939.1| hypothetical protein SORBIDRAFT_09g017260 [S...   100   5e-19
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-19

>gb|AAT38794.1| Putative hAT family dimerisation domain containing protein,
           identical [Solanum demissum]
          Length = 805

 Score =  117 bits (294), Expect = 2e-24
 Identities = 71/173 (41%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
 Frame = -3

Query: 495 EQLTSKRVQHENREELDLSSLSGDPRLRNNISNYHPNDHGSVRRAYLFKGPCQPNCI--- 325
           E      V  ++ +E DLSSL  DP  R +I NYHPN    +RRAYL  GPCQP      
Sbjct: 32  ENTNHSEVSLDSSQEFDLSSLKFDPGERTSILNYHPNHRDVIRRAYLLNGPCQPRLAVQK 91

Query: 324 FPPRTIGKRNRRFQKEWYGEF--SWLEYSIHKDAVFCHYCYLFKPTHEAQGGEDVFSQVY 151
           +P   I    RRF  EW+ +    WLEYS+ KDAV+C YCYLFK  +  QGG + FS + 
Sbjct: 92  YPQTNIFGSMRRFNHEWFDDIYHDWLEYSVSKDAVYCLYCYLFKDHNTNQGGGETFSTI- 150

Query: 150 *LGKEIQIKKNMLEDQIVLIILFTGQ-----HGLLNQEQHIETFLERQSDQVQ 7
             G +   KK+ L+  I L      Q       LL Q + I+   ERQS+Q++
Sbjct: 151 --GFKSWNKKSGLDKHIGLPNSIHNQSKKKCQDLLQQRRSIQFAFERQSNQLK 201


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score =  109 bits (272), Expect = 8e-22
 Identities = 66/151 (43%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
 Frame = -3

Query: 447 DLSSLSGDPRLRNNISNYHPNDHGSVRRAYLFKGPCQPN-CIFPPRTIGKRNRRFQKEWY 271
           +L  L  DP  R  +S YHPND   +RRAYL KGPCQPN   FP R IG   RRF   W+
Sbjct: 137 NLEELPSDPGKRPKMSTYHPNDQEIIRRAYLQKGPCQPNQHNFPQRKIGNSMRRFCPSWF 196

Query: 270 GEF-SWLEYSIHKDAVFCHYCYLFKPTHEAQGGEDVFSQVY*LGKEIQIKKNMLEDQI-- 100
            EF +WLEYSI KDA FC  CYLF+P    Q G D F      G     KK  L   +  
Sbjct: 197 NEFGNWLEYSIEKDAAFCLCCYLFRPDFGKQAGGDTFITE---GFTSWNKKTTLSSHVGA 253

Query: 99  ----VLIILFTGQHGLLNQEQHIETFLERQS 19
                  I +     L+ Q+QHIE  + + S
Sbjct: 254 GPNSAHNIAWKKCGDLMKQDQHIEGLMSKHS 284


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score =  107 bits (266), Expect = 4e-21
 Identities = 66/159 (41%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
 Frame = -3

Query: 453 ELDLSSLSGDPRLRNNISNYHPNDHGSVRRAYLFKGPCQP-NCIFPPRTIGKRNRRFQKE 277
           E+DL +L  +P  R  +S YHPND   +RRAYL KGPCQP    FP R  G   R+F  +
Sbjct: 38  EVDLENLPANPGERKQLSCYHPNDRDEIRRAYLAKGPCQPKEHNFPQRPFGTFLRKFNPD 97

Query: 276 WYGEF-SWLEYSIHKDAVFCHYCYLFK-PTHEAQGGEDVFSQVY*LGKEIQIKKNMLEDQ 103
           W+ EF SWLEYS+ KD VFC  CYL +    E +G +  F++ +   K    KK+ L   
Sbjct: 98  WFLEFGSWLEYSVSKDVVFCLCCYLMRFEIGENKGWDAFFTERFSNWK----KKDRLNVH 153

Query: 102 IVLIILFTGQ-----HGLLNQEQHIETFLERQSDQVQRD 1
           +        Q     + L+NQ+QHIE  + +QSD V+R+
Sbjct: 154 VGGPNSAHNQAWRKCNALMNQKQHIEVVVNKQSDLVKRE 192


>ref|XP_002440939.1| hypothetical protein SORBIDRAFT_09g017260 [Sorghum bicolor]
           gi|241946224|gb|EES19369.1| hypothetical protein
           SORBIDRAFT_09g017260 [Sorghum bicolor]
          Length = 630

 Score =  100 bits (248), Expect = 5e-19
 Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = -3

Query: 447 DLSSLSGDPRLRNNISNYHPNDHGSVRRAYLFKGPCQP-NCIFPPRTIGKRNRRFQKEWY 271
           D+  L  DP  R  I +Y+ N+  SV R Y+ KGPCQP +  FP R IG + RRF+ +W+
Sbjct: 38  DVDLLPHDPGKRLPIKSYNVNERNSVIRGYIAKGPCQPWSHDFPTRQIGGKPRRFKPDWF 97

Query: 270 GEFSWLEYSIHKDAVFCHYCYLFKPTHEAQGGE 172
           GEF+WLEYS+ KDA FC  CYLFK    + GG+
Sbjct: 98  GEFTWLEYSVEKDAAFCFVCYLFKHKTYSSGGD 130


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 15/181 (8%)
 Frame = -3

Query: 498 VEQLTSKRVQHENREELDLSSLSGDPRLRNNISNYHPNDHGSVRRAYLFKGPCQP-NCIF 322
           V Q +SK+    +  E++  +L  DP LR  I  YH ND  ++RRAYL KGPCQP +C F
Sbjct: 24  VTQSSSKK----SHIEINPDTLLADPGLRRPIYEYHINDRDAIRRAYLQKGPCQPSHCDF 79

Query: 321 PPRTIGKRN--RRFQKEWYGEF-SWLEYSIHKDAVFCHYCYLFKPTHEAQGGEDVFSQVY 151
           P +  G  +  RRF   W+G + +WLEYSI KDA FC YCYLFK    ++GG D F    
Sbjct: 80  PQKQFGNISTLRRFNPAWFGAYPTWLEYSIAKDAAFCLYCYLFK----SKGGVDSF---- 131

Query: 150 *LGK-----------EIQIKKNMLEDQIVLIILFTGQHGLLNQEQHIETFLERQSDQVQR 4
            +G+           ++ I K+     +  I        L+N++Q I T L  Q+ + Q 
Sbjct: 132 -VGEGFSNWKKKERFDLHIGKSNSCHNVARIKC----ENLMNEKQSIMTLLSEQTVKSQS 186

Query: 3   D 1
           D
Sbjct: 187 D 187


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