BLASTX nr result

ID: Coptis21_contig00016133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016133
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    78   2e-12
ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...    76   6e-12
ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779...    74   3e-11
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...    73   7e-11
gb|ABK21519.1| unknown [Picea sitchensis]                              67   3e-09

>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 6/92 (6%)
 Frame = +3

Query: 312 VIIFFGLVAFSACIASEFKRSKAKDMKLDGMSCHLSISPAFVLGVFASISLLSAQIIGNT 491
           +I F GL+AF  C+A+EFKRSK KD+KL+G  C+L+ S AF LGV A I L  A I+GN 
Sbjct: 14  IIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVAALICLFIAHILGN- 72

Query: 492 LIFCSR---GKKIIAWKQRIPF---SLMILSW 569
           ++ C R   G+K  + K + P+   +L+++SW
Sbjct: 73  MVICRRICSGEKSSSGKAKTPWITSTLLVVSW 104


>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 42/98 (42%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
 Frame = +3

Query: 300 LMYFVIIF--FGLVAFSACIASEFKRSKAKDMKLDGMSCHLSISPAFVLGVFASISLLSA 473
           L++F+++    GLV+F+ CIASE KR+K  D++ +G  CHL  SPAF LG+ + + L+ +
Sbjct: 14  LIFFIVVSHSLGLVSFTLCIASETKRNKKGDLRWNGKLCHLPSSPAFGLGIASLVCLVLS 73

Query: 474 QIIGNTLIF---CSRGKKIIAWKQRIPF---SLMILSW 569
           QI+GN+++F   CS GK+    K  IPF    L+++SW
Sbjct: 74  QIVGNSILFKTYCSGGKRNA--KCEIPFVARILLLISW 109


>ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779666 [Glycine max]
          Length = 191

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
 Frame = +3

Query: 300 LMYFVIIF--FGLVAFSACIASEFKRSKAKDMKLDGMSCHLSISPAFVLGVFASISLLSA 473
           L++ ++I    GLV+F+ CIASE KR+K  D++ +G  CHL  SPAF LGV + + L+ +
Sbjct: 14  LIFCIVISHSLGLVSFTLCIASETKRNKKGDLRWNGKLCHLPSSPAFGLGVASLVCLVLS 73

Query: 474 QIIGNTLIF---CSRGKKIIAWKQRIPF---SLMILSW 569
           QI+GN+++F   CS GK+    K  IPF    L+++SW
Sbjct: 74  QIVGNSILFRTYCSGGKRNA--KFEIPFVARILLLISW 109


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
 Frame = +3

Query: 300 LMYFVIIFFGLVAFSACIASEFKRSKAKDMKLDGMSCHLSISPAFVLGVFASISLLSAQI 479
           L   + IF GLV+F+ CIASE  ++K  D++ +G  C+L  S A+ LG+ A + L  AQI
Sbjct: 13  LSIIISIFLGLVSFTLCIASEITKNKMDDLRWNGKLCYLPSSQAYGLGIAALVCLFLAQI 72

Query: 480 IGNTLIF---CSRGKKIIAWKQRIPF---SLMILSW 569
           IGN+++F   CSR KK   +K  +PF    L+++SW
Sbjct: 73  IGNSMLFKNSCSRRKKNAQYK--LPFFARLLILISW 106


>gb|ABK21519.1| unknown [Picea sitchensis]
          Length = 217

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = +3

Query: 309 FVIIFFGLVAFSACIASEFKRSKAKDMKLDGMSCHLSISPAFVLGVFASISLLSAQIIGN 488
           ++I F GL+A +A IA+EF R+KAKD++ +   C L  SPA  LG  A++SLL AQ+  N
Sbjct: 11  YLIGFLGLLAVTAGIAAEFTRNKAKDVRYEEGGCSLPSSPASALGTTAALSLLLAQLTAN 70

Query: 489 TL---IFCSRGKKIIAWKQRIPFSLMILSW*VFRPIQFLF 599
            +   + C+R  + I    R+   ++I SW  F    +LF
Sbjct: 71  VIGGCLCCARDLRNIPTCNRLAAMILIFSWMTFAIAIYLF 110


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