BLASTX nr result

ID: Coptis21_contig00016131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016131
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic...   150   1e-34
ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thalia...   148   6e-34
ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]...   148   6e-34
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   148   6e-34
gb|AAL57365.1|AF404866_1 neuronal nitric oxide synthase protein ...   148   6e-34

>ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449515341|ref|XP_004164708.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 120

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = -1

Query: 535 DMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETH 356
           DM  DMQKEAID AI+AFEKHSVEK+IAEQIKK+FDK HGPTWHCIVGRNFGSYVTHET+
Sbjct: 43  DMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETN 102

Query: 355 HFVYFYLDQKAILLFKSG 302
           HFVYFYLDQKAILLFKSG
Sbjct: 103 HFVYFYLDQKAILLFKSG 120


>ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thaliana]
           gi|28466885|gb|AAO44051.1| At4g15930 [Arabidopsis
           thaliana] gi|332658267|gb|AEE83667.1| dynein light chain
           LC8-type [Arabidopsis thaliana]
          Length = 123

 Score =  148 bits (374), Expect = 6e-34
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = -1

Query: 535 DMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETH 356
           DM +DMQKEAI+IAISAFEK+SVEK+IAE IKK+FDKKHG TWHCIVGRNFGSYVTHET+
Sbjct: 46  DMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETN 105

Query: 355 HFVYFYLDQKAILLFKSG 302
           HFVYFYLDQKA+LLFKSG
Sbjct: 106 HFVYFYLDQKAVLLFKSG 123


>ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]
           gi|297316035|gb|EFH46458.1| At4g15930 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 123

 Score =  148 bits (374), Expect = 6e-34
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = -1

Query: 535 DMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETH 356
           DM +DMQKEAIDIAISAFEK+SVEK+IAE IKK+FDKKHG TWHCIVGRNFGSYVTHET+
Sbjct: 46  DMKDDMQKEAIDIAISAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETN 105

Query: 355 HFVYFYLDQKAILLFKSG 302
           HFVYFYL+QKA+LLFKSG
Sbjct: 106 HFVYFYLEQKAVLLFKSG 123


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  148 bits (374), Expect = 6e-34
 Identities = 65/78 (83%), Positives = 76/78 (97%)
 Frame = -1

Query: 535 DMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETH 356
           DM +DMQKEA+DIAI+AFE+++VEK++AE IKK+FDKKHGPTWHCIVGRNFGSYVTHET+
Sbjct: 43  DMKDDMQKEAVDIAIAAFERNNVEKDVAEHIKKEFDKKHGPTWHCIVGRNFGSYVTHETN 102

Query: 355 HFVYFYLDQKAILLFKSG 302
           HFVYFYLDQKA+LLFKSG
Sbjct: 103 HFVYFYLDQKAVLLFKSG 120


>gb|AAL57365.1|AF404866_1 neuronal nitric oxide synthase protein inhibitor [Arabidopsis
           thaliana]
          Length = 103

 Score =  148 bits (374), Expect = 6e-34
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = -1

Query: 535 DMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETH 356
           DM +DMQKEAI+IAISAFEK+SVEK+IAE IKK+FDKKHG TWHCIVGRNFGSYVTHET+
Sbjct: 26  DMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETN 85

Query: 355 HFVYFYLDQKAILLFKSG 302
           HFVYFYLDQKA+LLFKSG
Sbjct: 86  HFVYFYLDQKAVLLFKSG 103


Top