BLASTX nr result

ID: Coptis21_contig00016105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016105
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281079.2| PREDICTED: GTP-binding protein 5-like [Vitis...   147   1e-33
emb|CBI16141.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002532858.1| Mitochondrial GTPase, putative [Ricinus comm...   140   1e-31
gb|AFW57585.1| hypothetical protein ZEAMMB73_793279 [Zea mays]        135   3e-30
ref|NP_001068543.1| Os11g0704300 [Oryza sativa Japonica Group] g...   135   4e-30

>ref|XP_002281079.2| PREDICTED: GTP-binding protein 5-like [Vitis vinifera]
          Length = 487

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/111 (63%), Positives = 82/111 (73%)
 Frame = -2

Query: 333 RLKVKGGDGGSGCASFHRSRHXXXXXXXXXXXXXXXDVILECSPALWDFRGLQHHVNAKR 154
           RL  KGG+GGSGC+SFHRSRH               DVILECS  +WDF  LQHHVNAKR
Sbjct: 54  RLYAKGGEGGSGCSSFHRSRHDRHGRPDGGDGGRGGDVILECSATVWDFSNLQHHVNAKR 113

Query: 153 GGNGVSKNKIGSRGTDKVVLVPVGTMIHLVEGELPSIVDSCPIKALDPWEL 1
           GG+G SKNKIG+RG DKVV VPVGT++HLVEGE+PS V++    ALDPWE+
Sbjct: 114 GGHGSSKNKIGTRGADKVVRVPVGTVVHLVEGEIPSQVENRSSAALDPWEI 164


>emb|CBI16141.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/111 (63%), Positives = 82/111 (73%)
 Frame = -2

Query: 333 RLKVKGGDGGSGCASFHRSRHXXXXXXXXXXXXXXXDVILECSPALWDFRGLQHHVNAKR 154
           RL  KGG+GGSGC+SFHRSRH               DVILECS  +WDF  LQHHVNAKR
Sbjct: 54  RLYAKGGEGGSGCSSFHRSRHDRHGRPDGGDGGRGGDVILECSATVWDFSNLQHHVNAKR 113

Query: 153 GGNGVSKNKIGSRGTDKVVLVPVGTMIHLVEGELPSIVDSCPIKALDPWEL 1
           GG+G SKNKIG+RG DKVV VPVGT++HLVEGE+PS V++    ALDPWE+
Sbjct: 114 GGHGSSKNKIGTRGADKVVRVPVGTVVHLVEGEIPSQVENRSSAALDPWEI 164


>ref|XP_002532858.1| Mitochondrial GTPase, putative [Ricinus communis]
           gi|223527395|gb|EEF29536.1| Mitochondrial GTPase,
           putative [Ricinus communis]
          Length = 417

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/110 (60%), Positives = 77/110 (70%)
 Frame = -2

Query: 330 LKVKGGDGGSGCASFHRSRHXXXXXXXXXXXXXXXDVILECSPALWDFRGLQHHVNAKRG 151
           L  KGG GG+GC+SF RSRH               DVILECSPA+WDF GL HHVNA +G
Sbjct: 64  LNAKGGHGGNGCSSFRRSRHDRCGRPDGGNGGRGGDVILECSPAIWDFSGLHHHVNAAKG 123

Query: 150 GNGVSKNKIGSRGTDKVVLVPVGTMIHLVEGELPSIVDSCPIKALDPWEL 1
           G+G SKN IG+RG DKVV VP+GT+IHL++GELPS V  C    LDPWEL
Sbjct: 124 GHGGSKNMIGTRGEDKVVQVPIGTVIHLLKGELPSTVQKCSTTDLDPWEL 173


>gb|AFW57585.1| hypothetical protein ZEAMMB73_793279 [Zea mays]
          Length = 492

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/111 (56%), Positives = 79/111 (71%)
 Frame = -2

Query: 333 RLKVKGGDGGSGCASFHRSRHXXXXXXXXXXXXXXXDVILECSPALWDFRGLQHHVNAKR 154
           R++ KGGDGG+GC S  RSR                DVILECS ++WDF GLQHH+   R
Sbjct: 14  RMRAKGGDGGNGCVSLRRSRSNRHGMPDGGNGGKGGDVILECSRSIWDFSGLQHHMRGGR 73

Query: 153 GGNGVSKNKIGSRGTDKVVLVPVGTMIHLVEGELPSIVDSCPIKALDPWEL 1
           GGNGVSKN+IG+RG+DK+  VPVGT+IHLVEGE PS+  + P +ALDPW++
Sbjct: 74  GGNGVSKNQIGTRGSDKIAQVPVGTVIHLVEGEQPSLTVNKPTRALDPWDI 124


>ref|NP_001068543.1| Os11g0704300 [Oryza sativa Japonica Group]
           gi|77552708|gb|ABA95505.1| GTP1/OBG family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113645765|dbj|BAF28906.1| Os11g0704300 [Oryza sativa
           Japonica Group] gi|215740588|dbj|BAG97244.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 528

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/111 (57%), Positives = 79/111 (71%)
 Frame = -2

Query: 333 RLKVKGGDGGSGCASFHRSRHXXXXXXXXXXXXXXXDVILECSPALWDFRGLQHHVNAKR 154
           RL+ KGGDGG+GC S  RSR                DVILECS ++WDF GLQHH+ A R
Sbjct: 51  RLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECSRSVWDFSGLQHHMKASR 110

Query: 153 GGNGVSKNKIGSRGTDKVVLVPVGTMIHLVEGELPSIVDSCPIKALDPWEL 1
           G NGVSKN+IG+RG+DK+  VPVGT+IHLVEGE PS+  + P +ALDPW++
Sbjct: 111 GANGVSKNQIGTRGSDKIAQVPVGTVIHLVEGEQPSLSVNKPTRALDPWDI 161


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