BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016104
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   315   2e-83
ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [M...   277   4e-72
gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]        265   3e-68
gb|EEC72334.1| hypothetical protein OsI_05543 [Oryza sativa Indi...   245   2e-62

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  385 bits (989), Expect = e-104
 Identities = 206/400 (51%), Positives = 254/400 (63%), Gaps = 34/400 (8%)
 Frame = -1

Query: 1098 PDQTHLDNTAEISTPLATDGSEHGSRDGL------GLDEESCKMLRLEESSVNTQTECDH 937
            P Q       +I+  L  D S H  R  L      G  E+    ++ +E  +++QT  DH
Sbjct: 386  PSQEFCSCNTKINQDL-NDSSAHKDRGELEGCMTTGYAEKCESKIKEKEFHLDSQTGDDH 444

Query: 936  NACVVXXXXXXXXXXXXXXXKRNYHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSK 757
            N CVV               KR+YHL CLDPP   +P G+WHC  C+KKK + GVH+VS+
Sbjct: 445  NTCVVCKLGGKLLCCDGKGCKRSYHLACLDPPLGEIPPGIWHCMLCVKKKTELGVHAVSE 504

Query: 756  GVESLWDIREEEVSDCEGIQKQKKYLVKYKGLAHVHNKWILEHQLLLEAPVLVAKF-KKH 580
            GVES+WD RE E+   EG+QKQK+Y VKYKGLAHVHN WI E QLLLEAP LVAKF +K+
Sbjct: 505  GVESIWDTREVELPSAEGVQKQKQYFVKYKGLAHVHNHWIPESQLLLEAPSLVAKFNRKN 564

Query: 579  QV-----LKSEWTTPHRLLQKR----------------------EYEWFVKWSGLGYEHA 481
            QV      K EWT PHRLLQKR                       YEW VKW GLGYEHA
Sbjct: 565  QVKYFALYKLEWTVPHRLLQKRLLMPTKQSDGYYTGRAGDIPDCLYEWLVKWRGLGYEHA 624

Query: 480  TWELEDAPFLRSPEAVTLITDYESRHQKAISASNPSREKLLEQRKFTSFKLSKLPGRSVS 301
            TWELE+A FL SPEA +LI +YE+R +KA SAS+PS     + RK +  KLSKLPG    
Sbjct: 625  TWELENASFLNSPEAQSLIREYENRRRKAKSASDPSITD--KGRKASLVKLSKLPGAGSI 682

Query: 300  GPDSDHLNFVNKLREYWHKNQNAVVVDDQERILKAVLFILSVQSDVCRPFLXXXXXXXXX 121
            G D +HL+ VNKLRE WHK  NA+V+DD +R+++ VLFILS+Q+DVCRPFL         
Sbjct: 683  GIDDNHLSCVNKLRENWHKGLNAIVIDDHDRVMRVVLFILSLQADVCRPFLIISTSSVLP 742

Query: 120  AWEAEFKQSAPSVNVVVYTGNKEVRESVRALEFYEDGGCV 1
             WEAEF + A SVNVVVY+GNK++R S+R +EFYE+GGC+
Sbjct: 743  LWEAEFSRLASSVNVVVYSGNKDIRRSIRTMEFYEEGGCI 782


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score =  315 bits (806), Expect = 2e-83
 Identities = 185/438 (42%), Positives = 243/438 (55%), Gaps = 26/438 (5%)
 Frame = -1

Query: 1236 ENEEMPITCVLNNENKTDADQIEKKSGDDVHLLKNELLPEVERNYVPDQTHLDNTAEIST 1057
            E E++P   V    N+T     E +SG        + +P   +  + D  + D T  +S 
Sbjct: 297  EQEQLPAELVDLTVNRTPRVDTEVESG-------YKEMPFKRKRSIED-LNSDATTMVSN 348

Query: 1056 PLATDGS-EHGSRDGLGLDEESCKMLRLEESSVNTQTECDHNACVVXXXXXXXXXXXXXX 880
             +A     E+G  D +     S K  R           CD   C                
Sbjct: 349  KVADAAPYENGRTDSVAKCATSSKRQRC----------CDGQGC---------------- 382

Query: 879  XKRNYHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGI 700
             KR+YHL CLDPP   VPLGVWHC  C++KKI+FG+HSVSKG+ES+WD  E EV+D  G+
Sbjct: 383  -KRSYHLSCLDPPLGDVPLGVWHCLACVRKKIEFGMHSVSKGIESIWDASEVEVADDNGV 441

Query: 699  QKQKKYLVKYKGLAHVHNKWILEHQLLLEAPVLVAKF-KKHQV--LKSEWTTPHRLLQKR 529
            Q+QK++ VKYKGLAHVHN+W+ E+QL+LEAP L+AKF +K+QV   K EW  PH +LQKR
Sbjct: 442  QRQKQFYVKYKGLAHVHNRWLPENQLILEAPSLLAKFNQKNQVRKWKQEWIVPHHMLQKR 501

Query: 528  ----------------------EYEWFVKWSGLGYEHATWELEDAPFLRSPEAVTLITDY 415
                                  ++EW VKW GL YEHATWELE APF+ SPEA +LI DY
Sbjct: 502  SVMFPNQHVENFSHHASNILACQFEWLVKWRGLDYEHATWELEIAPFMNSPEAQSLIRDY 561

Query: 414  ESRHQKAISASNPSREKLLEQRKFTSFKLSKLPGRSVSGPDSDHLNFVNKLREYWHKNQN 235
            E+R  KA  A   S              + KL        D +HL+FVN L +YW K +N
Sbjct: 562  ENRLVKAKGAEYLS-------------IIDKLSAGGSPEFDYNHLDFVNYLHDYWLKGEN 608

Query: 234  AVVVDDQERILKAVLFILSVQSDVCRPFLXXXXXXXXXAWEAEFKQSAPSVNVVVYTGNK 55
            AV++DDQE+I K + FILS+ S+   PFL         +WE E  + APS+  VVY GNK
Sbjct: 609  AVLIDDQEQITKVISFILSLSSNASWPFLIITTSASLHSWEEELFRLAPSLYAVVYHGNK 668

Query: 54   EVRESVRALEFYEDGGCV 1
            ++R+S+R LEFY +GGC+
Sbjct: 669  DIRKSIRKLEFYSEGGCI 686


>ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355500678|gb|AES81881.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1564

 Score =  277 bits (709), Expect = 4e-72
 Identities = 151/318 (47%), Positives = 198/318 (62%), Gaps = 29/318 (9%)
 Frame = -1

Query: 873  RNYHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGIQK 694
            R YH  CLDP  K +P+G WHC  C++KKI+ GVHSVSKGVES+ D R E VS  + IQ+
Sbjct: 68   RRYHPSCLDPLLKFLPIGFWHCLWCVEKKIKLGVHSVSKGVESILDSR-EVVSKDKVIQR 126

Query: 693  QKKYLVKYKGLAHVHNKWILEHQLLLEAPVLVAKFKKHQVL---KSEWTTPHRLLQKRE- 526
            +  Y VKY+ LAH HN WI E Q+L+EAP L+ K+K  + +   K +W+ PHRLL KRE 
Sbjct: 127  E--YFVKYQDLAHAHNCWIPEKQMLIEAPKLLKKYKNRKQVVRWKKDWSIPHRLLLKREI 184

Query: 525  ---------------------YEWFVKWSGLGYEHATWELEDAPFLRSPEAVTLITDYES 409
                                 YEW VKW+GLGY+H TWEL+DA F+ S +   L+ +YES
Sbjct: 185  ILSKKNAHLFDGNDDNDSVCQYEWLVKWTGLGYDHVTWELDDASFMTSSKGKELVDNYES 244

Query: 408  RHQKAISASNPSREKLLEQRKFTSFKLSKLPGRSVSGPDSDHLNFVNKLREYWHKNQNAV 229
            R +K+   S P      E+ K +  +LS+L      G  + HL++VN+LR +WHK Q+AV
Sbjct: 245  RQKKSDGPSTPFEAN--EESKVSFTELSELSSGDSPGLYNQHLSYVNRLRMHWHKGQSAV 302

Query: 228  VVD---DQERILKAVLFILSVQSDVCRPFLXXXXXXXXXAWEAEFKQSAPSVNVVVYTGN 58
            +VD   DQER+ K +LFILS+  DV +PFL         AWE EF   APS N+VVY G 
Sbjct: 303  IVDDQIDQERVRKMILFILSLSCDVKKPFLIISTSTGLSAWEIEFFHLAPSANLVVYKGK 362

Query: 57   KEVRESVRALEFY-EDGG 7
            ++VR  +RAL+FY EDGG
Sbjct: 363  EDVRRRIRALDFYNEDGG 380


>gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]
          Length = 1990

 Score =  265 bits (676), Expect = 3e-68
 Identities = 150/372 (40%), Positives = 206/372 (55%), Gaps = 35/372 (9%)
 Frame = -1

Query: 1020 DGLGLDEESCKMLRLEESSVNTQTECDHNACVVXXXXXXXXXXXXXXXK---RNYHLDCL 850
            DG  +  +     R  E+    +T  D N CVV               K   R+YHL C+
Sbjct: 39   DGNSIGIQGACTSRNTEAIQCDETWYDDNICVVCRSREISDILKSCGGKGCKRHYHLSCM 98

Query: 849  DPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGIQKQKKYLVKY 670
            DP   V  LG+W C  C+KK+IQFGV+SVS+G+ESLWD++E       G+   K+Y VKY
Sbjct: 99   DPSLDV-SLGIWLCIMCMKKRIQFGVYSVSEGIESLWDVKE-------GVVNSKQYFVKY 150

Query: 669  KGLAHVHNKWILEHQLLLEAPV---LVAKFKK--HQVL----KSEWTTPHRLLQKR---- 529
            K LAHVHN+W+ E  ++   P    L++K  K  H+      K EW  PHRLL++R    
Sbjct: 151  KNLAHVHNQWVSESDIVDSTPQGSDLISKVSKKIHKEKTIRWKQEWAEPHRLLKRRLLMP 210

Query: 528  ------------------EYEWFVKWSGLGYEHATWELEDAPFLRSPEAVTLITDYESRH 403
                                EW VKW  LGYEHATWELE + FL +PEA  L   YE R 
Sbjct: 211  QKEAEVFFNSLGDKFVYCNVEWLVKWKDLGYEHATWELESSSFLCTPEAEELKRSYEDRF 270

Query: 402  QKAISASNPSREKLLEQRKFTSFK-LSKLPGRSVSGPDSDHLNFVNKLREYWHKNQNAVV 226
            + A  AS+PS+   +++ K   F+ L +LP     G D DHL  +N+LRE+WH +  A+ 
Sbjct: 271  KTARKASDPSK---VDKAKGGIFQQLERLPDGCPPGLDDDHLRSLNQLREFWHNSCGAIF 327

Query: 225  VDDQERILKAVLFILSVQSDVCRPFLXXXXXXXXXAWEAEFKQSAPSVNVVVYTGNKEVR 46
            +DDQER++K +LF+ S+   +C+P L          WE +F + A S+NVVVY G K+VR
Sbjct: 328  IDDQERVIKTILFVASILPHICQPLLIVSTTTTLSLWETKFNRLAASINVVVYNGEKDVR 387

Query: 45   ESVRALEFYEDG 10
            +S++ LEFY+DG
Sbjct: 388  KSIQDLEFYQDG 399


>gb|EEC72334.1| hypothetical protein OsI_05543 [Oryza sativa Indica Group]
          Length = 2670

 Score =  245 bits (626), Expect = 2e-62
 Identities = 155/454 (34%), Positives = 232/454 (51%), Gaps = 30/454 (6%)
 Frame = -1

Query: 1272 EVHQHAAFFSNPENEEMPITCVLNNENKTDADQIEKKSGDDVHLLKNELLPEVERNYVPD 1093
            EVHQH +  + P+N+          E++ + +  ++ +G   H  +N +   ++   +P 
Sbjct: 231  EVHQHISIETCPQNKVA--------ESRLEVEGRDRPTG---HSRQNSI-SSLQSAPIP- 277

Query: 1092 QTHLDNTAEISTPLATDGSEHGSRDGLGLDEESCKMLRLEESSVNTQTECDHNACVVXXX 913
                        P+  +  E G  DG  L  +        + + + + E + N CV    
Sbjct: 278  ------------PIHYEEPESGHGDGEPLSIQKEVASSQFKVTASDEMEGNSNICVACGT 325

Query: 912  XXXXXXXXXXXXKRNYHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDI 733
                        KR+YH+ CLD   + +  G+W C+ C +K++ FG+HSV+ G+ESLW++
Sbjct: 326  PGDLKSCDGEGCKRSYHVSCLDHWLEYLSPGMWFCTVCTEKRLLFGIHSVADGIESLWNV 385

Query: 732  REEEVSDCEGIQKQKKYLVKYKGLAHVHNKWILEHQLLLEAPV---LVAKFKKHQVL--- 571
            +E       G+Q  K+YLVKYK LAHVHN+W+ E  ++ + P    L++ F K       
Sbjct: 386  KE-------GMQNGKQYLVKYKNLAHVHNRWVPEG-VINDTPGGCDLLSLFNKRDHKEKT 437

Query: 570  --KSEWTTPHRLLQKR----------------------EYEWFVKWSGLGYEHATWELED 463
              K EWT PH LL+KR                        EW VKW  LGYEHATWELE 
Sbjct: 438  NWKKEWTEPHHLLRKRPLMPPKEADDFFCSSRANIEHCNVEWLVKWRDLGYEHATWELET 497

Query: 462  APFLRSPEAVTLITDYESRHQKAISASNPSREKLLEQRKFTSFKLSKLPGRSVSGPDSDH 283
            A FLR+P+A  L   YE+R + A  +S P   K+  +   T  KL +LP     G D+DH
Sbjct: 498  ACFLRTPQADELKRKYENRRKAAKQSSIPVETKVKHK---TFQKLQRLPDEWPPGFDNDH 554

Query: 282  LNFVNKLREYWHKNQNAVVVDDQERILKAVLFILSVQSDVCRPFLXXXXXXXXXAWEAEF 103
            L  +N+L E+W K+  AV+VDD+E + K +LF L+V  DVC+P L         AWE +F
Sbjct: 555  LFSINQLLEFWCKSHGAVLVDDKEYVTKTILFTLTVLPDVCQPLLIVTTPASLSAWEIQF 614

Query: 102  KQSAPSVNVVVYTGNKEVRESVRALEFYEDGGCV 1
               AP +NVVVY G K+  + ++ LEFY++  C+
Sbjct: 615  NHLAPFINVVVYDGQKDTLKLIQDLEFYDNRRCM 648