BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016099
         (2213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   659   0.0  
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   613   e-173
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   602   e-169
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   595   e-167
ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195...   431   e-118

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 590

 Score =  659 bits (1699), Expect = 0.0
 Identities = 346/558 (62%), Positives = 408/558 (73%), Gaps = 2/558 (0%)
 Frame = +3

Query: 96   TRKENSLMSNDPRCTHAQLIKTANNDLSLINNLITSYSKSNLLSDALRLFHQ-IPSPNVV 272
            T    S  + +PR  HAQ IK+A  D S  N+LIT YSKSNLLS A+R+FH  IPSPNVV
Sbjct: 21   TATTTSTPNCNPRLIHAQAIKSAITDRSFYNSLITLYSKSNLLSKAVRIFHHHIPSPNVV 80

Query: 273  TWTALISSYTNTVFSFHHFISMLRYPKLPNEHTLASLFKTCASLSSLPFGLQLHSFSLKL 452
            +WTALIS+Y +T F+  HFISMLR+P LPN+ TLASL KTCASL SL FGLQLHS SLKL
Sbjct: 81   SWTALISAYASTSFALLHFISMLRHPTLPNQRTLASLLKTCASLPSLSFGLQLHSLSLKL 140

Query: 453  CLSHLPFTGSALVHFYSKCRLSNDAVKAFHEIPERDEVCYSAIIVGLAQNSQPTHALSLF 632
             LS  PF  SALV+FYSKCRL  +A + F EI ERDEVC++A+IVGLAQN++P  AL +F
Sbjct: 141  SLSAQPFVSSALVNFYSKCRLPLEACRVFDEITERDEVCFAAMIVGLAQNARPVDALLVF 200

Query: 633  ADMVSSNVGSTMYSVSGXXXXXXXXXXXEQCRIIHAHAVVAGH-TEVVVGTALVDGYGKS 809
             +M + NVGSTMYSVSG           EQCRIIH HAV  G  + ++VGTALVDGYGK+
Sbjct: 201  GEMKACNVGSTMYSVSGALRAASELAALEQCRIIHGHAVSTGFDSNLIVGTALVDGYGKA 260

Query: 810  GIVSYARRVFDEMLNNMNIVGWNAIMAAYAQQGDINSVIELFDGMKQRGFVADELSFLAI 989
            G+V  ARR+FDE+L ++N V WNA+MA YAQQGD  SV+ELF+ M+ RG V DE SFLAI
Sbjct: 261  GLVLDARRIFDELLPSLNEVAWNAMMAGYAQQGDQRSVVELFNSMEARGLVPDEYSFLAI 320

Query: 990  FTACRNAGLVVEAEKWLNCMISDYEVEPELEHYTCVVGXXXXXXXXXXXXXXTKTMPFTP 1169
             T+  NAGLV EAE WL  M  DY +EP LEHYTC+VG                TMPF P
Sbjct: 321  LTSLYNAGLVGEAEGWLTRMKVDYGLEPGLEHYTCLVGTMGRAGQLEDAERIAMTMPFEP 380

Query: 1170 DAAVCRLLLSACAIHGETKMASEMSQKLLEKNAQDDSAYAILANVHAASKSWDKVADVRK 1349
            DAAV R LLS+CA+HG   MA  M ++L+E + QDDSAY I+ANV A +  WD+VA+VRK
Sbjct: 381  DAAVWRALLSSCAMHGAADMAWAMGRRLMELDPQDDSAYVIVANVLATNGRWDEVAEVRK 440

Query: 1350 MMKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGYKEVSDA 1529
            MMK   V+KE GRSWIEVRG+VH F +GD RHER+ E+Y KL ELME I +LGYKE    
Sbjct: 441  MMKDRMVKKEGGRSWIEVRGKVHVFLAGDRRHERSHEIYAKLVELMEKIEELGYKE---- 496

Query: 1530 MLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLRICKDCHEALKYMSIV 1709
                       + LWYHSEKLAVAFGVVS AAPPGKALR+VKNLRICKDCHEA KY+S V
Sbjct: 497  -------GVKKETLWYHSEKLAVAFGVVSDAAPPGKALRIVKNLRICKDCHEAFKYISCV 549

Query: 1710 IEREILVRDVNRYHRFMH 1763
            +EREI+VRDVNRYHRF++
Sbjct: 550  VEREIIVRDVNRYHRFLN 567


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus] gi|449487598|ref|XP_004157706.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  613 bits (1581), Expect = e-173
 Identities = 308/557 (55%), Positives = 393/557 (70%), Gaps = 1/557 (0%)
 Frame = +3

Query: 123  NDPRCTHAQLIKTANNDLSLINNLITSYSKSNLLSDALRLFHQIPSPNVVTWTALISSYT 302
            +DPR  HAQ IK+   +  + NNLIT YSK+NLL  + RLF+QIP P++V+WTALIS+++
Sbjct: 27   SDPRIDHAQAIKSPATECVVYNNLITRYSKANLLHYSARLFNQIPFPDIVSWTALISAHS 86

Query: 303  NTVFSFHHFISMLRYPKLPNEHTLASLFKTCASLSSLPFGLQLHSFSLKLCLSHLPFTGS 482
            +T  S  HF+SMLRYP  PNE TLA LFKTCASL  + FG  LHS + KL L + P++GS
Sbjct: 87   STFLSLRHFVSMLRYPTFPNERTLAPLFKTCASLPCVSFGFALHSLAYKLSLCNGPYSGS 146

Query: 483  ALVHFYSKCRLSNDAVKAFHEIPERDEVCYSAIIVGLAQNSQPTHALSLFADMVSSNVGS 662
            ALV+FYSKCRL NDA K F EI  RDE CYSA++VGLAQN+Q   ALS+F  M +S V S
Sbjct: 147  ALVNFYSKCRLFNDACKVFDEISYRDEFCYSALVVGLAQNAQSIRALSMFRQMKASEVAS 206

Query: 663  TMYSVSGXXXXXXXXXXXEQCRIIHAHAVVAG-HTEVVVGTALVDGYGKSGIVSYARRVF 839
            T+YSVSG           E+CR+IH+HAVV G  T V+V TAL+DGYGKSG++  AR+VF
Sbjct: 207  TIYSVSGALRAAADLAALERCRVIHSHAVVTGLDTNVIVQTALIDGYGKSGLIIDARQVF 266

Query: 840  DEMLNNMNIVGWNAIMAAYAQQGDINSVIELFDGMKQRGFVADELSFLAIFTACRNAGLV 1019
            DE L  MNIVGWNA++++YAQQGD NS +E+F+ MK  G   DE SFLAI ++  N+GLV
Sbjct: 267  DENLGCMNIVGWNAMLSSYAQQGDQNSTLEVFNSMKPFGMSPDEYSFLAILSSFCNSGLV 326

Query: 1020 VEAEKWLNCMISDYEVEPELEHYTCVVGXXXXXXXXXXXXXXTKTMPFTPDAAVCRLLLS 1199
             E + WL  MI +Y V+P LEH+TC++                 TMPF PD AV R LLS
Sbjct: 327  SEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRTGKLEEAERVAMTMPFVPDEAVWRALLS 386

Query: 1200 ACAIHGETKMASEMSQKLLEKNAQDDSAYAILANVHAASKSWDKVADVRKMMKVGRVRKE 1379
            + A HG   MA  M+++LLE N  DDSAY I++N  + +  W++VA VRK+MK   V+K 
Sbjct: 387  SSASHGAGDMAWTMAKRLLELNQHDDSAYVIVSNALSVAARWEEVALVRKLMKERHVKKI 446

Query: 1380 IGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGYKEVSDAMLHNMDVAEN 1559
             G+SWIEVRGE H F +GD  HER +E+  KL+EL+  I KLGY  V    LH +   E 
Sbjct: 447  SGKSWIEVRGEAHVFLAGDRNHERAEEMNAKLKELVGEIEKLGYVPVCSETLHKVGEKER 506

Query: 1560 SKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLRICKDCHEALKYMSIVIEREILVRDV 1739
             +AL YHSEKLA+A+G+++G APPGKALR++KNLRIC+DCH   KY S V+++EI+VRD+
Sbjct: 507  KEALLYHSEKLALAYGILTGVAPPGKALRIIKNLRICRDCHLFFKYASRVLKKEIIVRDI 566

Query: 1740 NRYHRFMHGSCTCGDHW 1790
            NRYHRF +GSCTC D W
Sbjct: 567  NRYHRFSYGSCTCADIW 583


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 561

 Score =  602 bits (1551), Expect = e-169
 Identities = 306/560 (54%), Positives = 395/560 (70%), Gaps = 2/560 (0%)
 Frame = +3

Query: 117  MSNDPRCTHAQLIKTANNDLSLINNLITSYSKSNLLSDALRLFHQIP-SPNVVTWTALIS 293
            MS DPR  HA+ I +   D ++ NNLIT YSKSNL S A+ LFH++P  PNVV+WTALIS
Sbjct: 15   MSMDPRVRHARAITSHAKDRAVWNNLITHYSKSNLSSYAVSLFHRLPFPPNVVSWTALIS 74

Query: 294  SYTNTVFSFHHFISMLRYPKLPNEHTLASLFKTCASLSSLPFGLQLHSFSLKLCLSHLPF 473
            +++NT+ S  HF++MLR+  LPN  TLASLF TCA+L+++ F L LHS +LKL L+H PF
Sbjct: 75   AHSNTLLSLRHFLAMLRHNTLPNHRTLASLFATCAALTAVSFALSLHSLALKLALAHHPF 134

Query: 474  TGSALVHFYSKCRLSNDAVKAFHEIPERDEVCYSAIIVGLAQNSQPTHALSLFADMVSSN 653
              S+L+  Y+K R+ ++A K F EIP+ D VC+SA++V LAQNS+   ALS+F+DM    
Sbjct: 135  PASSLLSVYAKLRMPHNARKVFDEIPQPDNVCFSALVVALAQNSRSVDALSVFSDMRCRG 194

Query: 654  VGSTMYSVSGXXXXXXXXXXXEQCRIIHAHAVVAG-HTEVVVGTALVDGYGKSGIVSYAR 830
              ST++ VSG           EQCR++HAHA++AG  + VVVG+A+VDGYGK+G+V  AR
Sbjct: 195  FASTVHGVSGGLRAAAQLAALEQCRMMHAHAIIAGLDSNVVVGSAVVDGYGKAGVVDDAR 254

Query: 831  RVFDEMLNNMNIVGWNAIMAAYAQQGDINSVIELFDGMKQRGFVADELSFLAIFTACRNA 1010
            RVF++ L++MNI GWNA+MA YAQ GD  S  ELF+ ++  G V DE +FLAI TA  NA
Sbjct: 255  RVFEDSLDDMNIAGWNAMMAGYAQHGDYQSAFELFESLEGFGLVPDEYTFLAILTALCNA 314

Query: 1011 GLVVEAEKWLNCMISDYEVEPELEHYTCVVGXXXXXXXXXXXXXXTKTMPFTPDAAVCRL 1190
            G+ +E  +W   M  DY +EP LEHYTC+VG                TMPF PDAAV R 
Sbjct: 315  GMFLEIYRWFTRMRVDYGLEPSLEHYTCLVGAMARAGELERAERVVLTMPFEPDAAVWRA 374

Query: 1191 LLSACAIHGETKMASEMSQKLLEKNAQDDSAYAILANVHAASKSWDKVADVRKMMKVGRV 1370
            LLS CA  GE   A  M++++LE    DD AY  +ANV +++  WD VA++RKMMK  RV
Sbjct: 375  LLSVCAYRGEADKAWCMAKRVLELEPHDDYAYVSVANVLSSAGRWDDVAELRKMMKDRRV 434

Query: 1371 RKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGYKEVSDAMLHNMDV 1550
            +K+ GRSWIEV+GEVH F +GD +HER+KE+Y KL ELM  I KLGY+            
Sbjct: 435  KKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGYE------------ 482

Query: 1551 AENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLRICKDCHEALKYMSIVIEREILV 1730
             +  ++LWYHSEKLAVAFGV+ G+APPGK LR+VKNLRICKDCHEA KYM+ V+EREI+V
Sbjct: 483  -KRKESLWYHSEKLAVAFGVLCGSAPPGKPLRIVKNLRICKDCHEAFKYMTRVLEREIIV 541

Query: 1731 RDVNRYHRFMHGSCTCGDHW 1790
            RDVNRYHRF++G+CTC D W
Sbjct: 542  RDVNRYHRFVNGNCTCRDIW 561


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 561

 Score =  595 bits (1535), Expect = e-167
 Identities = 308/560 (55%), Positives = 391/560 (69%), Gaps = 2/560 (0%)
 Frame = +3

Query: 117  MSNDPRCTHAQLIKTANNDLSLINNLITSYSKSNLLSDALRLFHQIP-SPNVVTWTALIS 293
            MS DPR  HAQ I +   D ++ NNLIT YSKS+L S A+ LF ++P  PNVV+WTALIS
Sbjct: 15   MSMDPRARHAQAITSHIKDRAVWNNLITHYSKSDLSSYAVSLFQRLPFPPNVVSWTALIS 74

Query: 294  SYTNTVFSFHHFISMLRYPKLPNEHTLASLFKTCASLSSLPFGLQLHSFSLKLCLSHLPF 473
            +++NT+ S  HF++MLR+  LPN  T+ASLF TCA+L+++ F L LHS +LKL LS  PF
Sbjct: 75   AHSNTLLSLRHFLAMLRHNTLPNHRTVASLFTTCAALTAVSFALSLHSLALKLSLSQHPF 134

Query: 474  TGSALVHFYSKCRLSNDAVKAFHEIPERDEVCYSAIIVGLAQNSQPTHALSLFADMVSSN 653
              S+L+  Y+K R+  +A K F EIP+ D VC+SA+IV LAQNS+   A S+F++M    
Sbjct: 135  PASSLLSLYAKLRMPLNARKVFDEIPQPDNVCFSALIVALAQNSRSVDASSVFSEMRGRG 194

Query: 654  VGSTMYSVSGXXXXXXXXXXXEQCRIIHAHAVVAG-HTEVVVGTALVDGYGKSGIVSYAR 830
              ST++SVSG           EQCR++HAHAVV G  + VVVG+ALVDGYGK+G+V+ AR
Sbjct: 195  FASTVHSVSGVLRAAAQLAALEQCRMMHAHAVVLGLDSNVVVGSALVDGYGKAGVVNDAR 254

Query: 831  RVFDEMLNNMNIVGWNAIMAAYAQQGDINSVIELFDGMKQRGFVADELSFLAIFTACRNA 1010
            RVF++ L++MN+VGWNA+MA YAQQGD  S  ELF+ ++  G V DE +FLAI TA  NA
Sbjct: 255  RVFEDNLDDMNVVGWNAMMAGYAQQGDYQSAFELFESLEGCGLVPDEYTFLAILTALCNA 314

Query: 1011 GLVVEAEKWLNCMISDYEVEPELEHYTCVVGXXXXXXXXXXXXXXTKTMPFTPDAAVCRL 1190
            G+ +E   W   M  DY +EP LEHYTC+VG                TMP  PDAAV R 
Sbjct: 315  GMFLEIAPWFTRMRVDYGLEPSLEHYTCLVGAMARAGELERAERVVLTMPIEPDAAVWRA 374

Query: 1191 LLSACAIHGETKMASEMSQKLLEKNAQDDSAYAILANVHAASKSWDKVADVRKMMKVGRV 1370
            LLS CA  GE   A  M++++LE    DD AY  +ANV +++  WD VA++RKMMK  RV
Sbjct: 375  LLSVCAYRGEADKAWSMAKRVLELEPNDDYAYVSVANVLSSAGRWDDVAELRKMMKDRRV 434

Query: 1371 RKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGYKEVSDAMLHNMDV 1550
            +K+ GRSWIEV+GEVH F +GD +HER+KE+Y KL ELM  I KLGY+            
Sbjct: 435  KKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGYE------------ 482

Query: 1551 AENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLRICKDCHEALKYMSIVIEREILV 1730
             +  +ALWYHSEKLAVAFGV+ G APPGK LR+VKNLRICKDCHEA KYM+ VIEREI+V
Sbjct: 483  -KRKEALWYHSEKLAVAFGVLCGPAPPGKPLRIVKNLRICKDCHEAFKYMTRVIEREIIV 541

Query: 1731 RDVNRYHRFMHGSCTCGDHW 1790
            RDVNRYHRF++G+CTC D W
Sbjct: 542  RDVNRYHRFVNGNCTCSDIW 561


>ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195614038|gb|ACG28849.1|
            vegetative storage protein [Zea mays]
          Length = 563

 Score =  431 bits (1107), Expect = e-118
 Identities = 253/566 (44%), Positives = 334/566 (59%), Gaps = 11/566 (1%)
 Frame = +3

Query: 126  DPRCTHAQLIKTANNDLSLINNLITSYSKSNLLSDALRLFHQIPSPNVVTWTALISSYTN 305
            DP   HA LIKTA++  +  N L + Y  S     +L L   +P     T ++L SS ++
Sbjct: 21   DPAVLHAVLIKTASSSRAAYNLLFSRYHPSL----SLHLLSHLPFCFRPTASSLTSSLSS 76

Query: 306  -TVFSFHHFISMLRY-----PKLPNEHTLASLFKTCASLSSLPFGL--QLHSFSLKLCLS 461
             +  S    + +LR      P L  +  L+SL      L S+P  +   +H+ + KL LS
Sbjct: 77   LSASSPASALPLLRRVLGMSPALLCDGPLSSL------LRSMPPSIAPHVHALAFKLALS 130

Query: 462  HLPFTGSALVHFYSKCRLSNDAVKAFHEIP--ERDEVCYSAIIVGLAQNSQPTHALSLFA 635
              P++ S L+  YS+ R    A   F EIP   RD VCYS+ IVGLAQN     +LS+FA
Sbjct: 131  SSPYSASCLITLYSRARSPACARHLFDEIPVANRDPVCYSSTIVGLAQNGWYEESLSVFA 190

Query: 636  DMVSSNVGSTMYSVSGXXXXXXXXXXXEQCRIIHAHAVVAG-HTEVVVGTALVDGYGKSG 812
             M ++ V STM+++SG           EQ   IHAHAVV G    V VGTALVD YGK+G
Sbjct: 191  GMRANGVDSTMHALSGSLRAAAGLAVLEQTCGIHAHAVVVGLDGNVAVGTALVDAYGKAG 250

Query: 813  IVSYARRVFDEMLNNMNIVGWNAIMAAYAQQGDINSVIELFDGMKQRGFVADELSFLAIF 992
             V  A +VF+ +  + N++ WNA+++A+AQQGD+  V  LF+ M + GF  D L+FLA+ 
Sbjct: 251  DVDDAAKVFEGLGGDRNLITWNAVLSAHAQQGDVQEVTGLFNQMMELGFAPDGLTFLAVL 310

Query: 993  TACRNAGLVVEAEKWLNCMISDYEVEPELEHYTCVVGXXXXXXXXXXXXXXTKTMPFTPD 1172
            T+C NAG   EA+ WL  M S Y V+P+LEHYTCVVG                TMP  PD
Sbjct: 311  TSCSNAGAATEAKFWLEAMQSKYGVKPDLEHYTCVVGAMARVGHLEDAESFACTMPCKPD 370

Query: 1173 AAVCRLLLSACAIHGETKMASEMSQKLLEKNAQDDSAYAILANVHAASKSWDKVADVRKM 1352
            AAV R LL  C +H    MA  M Q+LLE N +DDSAY +LANV++ +   D+ A+    
Sbjct: 371  AAVWRTLLMGCVVHRRVDMAESMGQRLLEINPKDDSAYVMLANVYSTAGKTDEEAEAWTA 430

Query: 1353 MKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGYKEVSDAM 1532
            M+   VRKE GRSWIEVRG VH F + + RHE+  E+YDKL EL++ + KLGYKE  +  
Sbjct: 431  MRDHGVRKEGGRSWIEVRGLVHVFVANERRHEQLLEIYDKLHELIQEVEKLGYKEADE-- 488

Query: 1533 LHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLRICKDCHEALKYMSIVI 1712
                        LW+HSE+LA+A+G++SGAAP GK LR+VKNLRIC  CHE  KY S+VI
Sbjct: 489  -----------RLWHHSERLALAYGLISGAAPSGKVLRIVKNLRICAHCHEFFKYASMVI 537

Query: 1713 EREILVRDVNRYHRFMHGSCTCGDHW 1790
            +R I+VRDVNRYH    G C+C   W
Sbjct: 538  DRVIVVRDVNRYHTIKKGDCSCRGCW 563