BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016098
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   288   2e-75
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   285   2e-74
gb|AFK41712.1| unknown [Medicago truncatula]                          281   3e-73
gb|ACJ83279.1| unknown [Medicago truncatula]                          278   2e-72
emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera]   277   3e-72

>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  288 bits (737), Expect = 2e-75
 Identities = 148/228 (64%), Positives = 165/228 (72%), Gaps = 4/228 (1%)
 Frame = -3

Query: 891 MSLTIPTTFSKALSNPKLNNQFTPKSRTQIVCCTSNEQTQSPSKTTXXXXXXXXXXXXXX 712
           MSLTIPT  SK +S  K  +QFT K RT  + C+SN+   S S                 
Sbjct: 1   MSLTIPTNLSKPISTSKFGSQFTTKPRTSAIVCSSNQTPVSNSTEESSSSLKAFSAALAL 60

Query: 711 XXXXXXXAV----ADIAGLTPCKESKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIQATM 544
                   V    ADI+GLTPCK+SKQFAKR             LY+PDSAPALAI AT+
Sbjct: 61  SSILLSAPVLPASADISGLTPCKDSKQFAKREKQQIKKLESSLKLYSPDSAPALAINATI 120

Query: 543 EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLI 364
           EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLI
Sbjct: 121 EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLI 180

Query: 363 AIRDEKKPTEKEIIIDVPLASRLLFRGFIWPVAAYRALVTGELIDPSV 220
           A+RD+KKPT KEIIIDVPLA+RL++RGFIWPVAAYR  + G+LIDP+V
Sbjct: 181 AVRDDKKPTMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228


>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  285 bits (728), Expect = 2e-74
 Identities = 147/223 (65%), Positives = 162/223 (72%)
 Frame = -3

Query: 891 MSLTIPTTFSKALSNPKLNNQFTPKSRTQIVCCTSNEQTQSPSKTTXXXXXXXXXXXXXX 712
           MSLTIPT  SK +S   LN+QFT K R   + C+S+      S                 
Sbjct: 1   MSLTIPTNLSKPIST--LNSQFTKKPRFATIVCSSSSSCDEQSSCNLKAFSAALALSSVL 58

Query: 711 XXXXXXXAVADIAGLTPCKESKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIQATMEKTK 532
                  A ADI+GLTPCKESKQFAKR             LYAPDSAPALAIQAT+EKTK
Sbjct: 59  LSVPVLPASADISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPALAIQATVEKTK 118

Query: 531 RRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD 352
           RRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA+RD
Sbjct: 119 RRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAVRD 178

Query: 351 EKKPTEKEIIIDVPLASRLLFRGFIWPVAAYRALVTGELIDPS 223
           +KKPT KEIIIDVPLA++L++RGF WPVAAYR  + GELIDP+
Sbjct: 179 DKKPTMKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDPN 221


>gb|AFK41712.1| unknown [Medicago truncatula]
          Length = 224

 Score =  281 bits (718), Expect = 3e-73
 Identities = 148/226 (65%), Positives = 165/226 (73%), Gaps = 2/226 (0%)
 Frame = -3

Query: 891 MSLTIPTTFSKALSN--PKLNNQFTPKSRTQIVCCTSNEQTQSPSKTTXXXXXXXXXXXX 718
           MSLTIPT  SK  S   PKL  +  PK  T I+ C++N++  +    +            
Sbjct: 1   MSLTIPTNLSKPTSTLRPKLPQK--PKLSTNIIHCSTNQEKPTNDVNSNLKAFSAALALS 58

Query: 717 XXXXXXXXXAVADIAGLTPCKESKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIQATMEK 538
                    AVADI+GLTPC+ESKQFAKR             LYAPDSAPALAI+AT+EK
Sbjct: 59  SILISSPLPAVADISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKATVEK 118

Query: 537 TKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAI 358
           TKRRFDNYGKQGLLCG+DGLPHLIV+GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAI
Sbjct: 119 TKRRFDNYGKQGLLCGADGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAI 178

Query: 357 RDEKKPTEKEIIIDVPLASRLLFRGFIWPVAAYRALVTGELIDPSV 220
           RDEKKPT+KEIIIDVPLASRL+FRGF WP+AAYR LV GELI   V
Sbjct: 179 RDEKKPTQKEIIIDVPLASRLVFRGFSWPIAAYRELVNGELIAKDV 224


>gb|ACJ83279.1| unknown [Medicago truncatula]
          Length = 224

 Score =  278 bits (710), Expect = 2e-72
 Identities = 147/226 (65%), Positives = 164/226 (72%), Gaps = 2/226 (0%)
 Frame = -3

Query: 891 MSLTIPTTFSKALSN--PKLNNQFTPKSRTQIVCCTSNEQTQSPSKTTXXXXXXXXXXXX 718
           MSLTIPT  SK  S   PKL  +  PK  T I+ C++N++  +    +            
Sbjct: 1   MSLTIPTNLSKPTSTLRPKLPQK--PKLSTNIIHCSTNQEKPTNDVNSNLKAFSAALALS 58

Query: 717 XXXXXXXXXAVADIAGLTPCKESKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIQATMEK 538
                    AVADI+GLTPC+ESKQFAKR             LYAPDSAPALAI+AT+EK
Sbjct: 59  SILISSPLPAVADISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKATVEK 118

Query: 537 TKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAI 358
           TKRRFDNYGKQGLLCG+DGLPHLIV+GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAI
Sbjct: 119 TKRRFDNYGKQGLLCGADGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAI 178

Query: 357 RDEKKPTEKEIIIDVPLASRLLFRGFIWPVAAYRALVTGELIDPSV 220
           RDEKKPT+KEIIIDV LASRL+FRGF WP+AAYR LV GELI   V
Sbjct: 179 RDEKKPTQKEIIIDVTLASRLVFRGFSWPIAAYRELVNGELIAKDV 224


>emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera]
          Length = 221

 Score =  277 bits (709), Expect = 3e-72
 Identities = 149/224 (66%), Positives = 159/224 (70%)
 Frame = -3

Query: 891 MSLTIPTTFSKALSNPKLNNQFTPKSRTQIVCCTSNEQTQSPSKTTXXXXXXXXXXXXXX 712
           MSLTIPT  SK L  P+L++    K+R  IVC  S E    P+  +              
Sbjct: 1   MSLTIPTNLSKPLK-PRLSSPSFQKARPMIVCSASTEP--QPTNKSPLQAFSAALALSSI 57

Query: 711 XXXXXXXAVADIAGLTPCKESKQFAKRXXXXXXXXXXXXXLYAPDSAPALAIQATMEKTK 532
                  A ADIAGLTPCKESKQFAKR             LYAPDSAPALAI AT+EKTK
Sbjct: 58  ILAAPVPAYADIAGLTPCKESKQFAKREKQALKKLESSLKLYAPDSAPALAINATIEKTK 117

Query: 531 RRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD 352
           RRF NY  QGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD
Sbjct: 118 RRFTNYANQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD 177

Query: 351 EKKPTEKEIIIDVPLASRLLFRGFIWPVAAYRALVTGELIDPSV 220
           EKKPT+KEIIIDVPLASRL+FRGFIWPVAAYR  V G+LI   V
Sbjct: 178 EKKPTQKEIIIDVPLASRLVFRGFIWPVAAYREFVNGDLIAKDV 221