BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016097
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46555.1| unknown [Lotus japonicus]                              204   2e-50
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II su...   202   8e-50
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...   201   1e-49
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   200   3e-49
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   198   9e-49

>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  204 bits (518), Expect = 2e-50
 Identities = 103/137 (75%), Positives = 110/137 (80%)
 Frame = -1

Query: 736 MNAPDRYERFVVPDGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQXXXXXXXXXXX 557
           MNAPDRYERFVVP+GTKKVSYERDTKIINAASFT+EREDHTIGNILRMQ           
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQL---------- 50

Query: 556 XXXXXXXXXXXHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQAINDLDKELS 377
                      HRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQ+INDLDKEL 
Sbjct: 51  -----------HRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELD 99

Query: 376 HLKGVFEEEVLKHSRDF 326
           HLK  FE ++L+ SRD+
Sbjct: 100 HLKNAFEADMLRFSRDY 116


>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Glycine
           max]
          Length = 116

 Score =  202 bits (513), Expect = 8e-50
 Identities = 102/137 (74%), Positives = 109/137 (79%)
 Frame = -1

Query: 736 MNAPDRYERFVVPDGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQXXXXXXXXXXX 557
           MNAPDRYERFVVP+GTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQ           
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQL---------- 50

Query: 556 XXXXXXXXXXXHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQAINDLDKELS 377
                      HRDPNVLFAGYKLPHPLQYKIIVRIHT SQSSPMQAYNQ+INDLD+EL 
Sbjct: 51  -----------HRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELD 99

Query: 376 HLKGVFEEEVLKHSRDF 326
           HLK  FE E+LK SRD+
Sbjct: 100 HLKSAFEAEMLKFSRDY 116


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score =  201 bits (512), Expect = 1e-49
 Identities = 101/137 (73%), Positives = 109/137 (79%)
 Frame = -1

Query: 736 MNAPDRYERFVVPDGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQXXXXXXXXXXX 557
           MNAPDRYERFVVP+GTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQ           
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQL---------- 50

Query: 556 XXXXXXXXXXXHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQAINDLDKELS 377
                      HRDPNVLFAGYKLPHPLQYKIIVRIHT SQSSPMQAYNQ++NDLD+EL 
Sbjct: 51  -----------HRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELD 99

Query: 376 HLKGVFEEEVLKHSRDF 326
           HLK  FE E+LK SRD+
Sbjct: 100 HLKSAFEAEMLKFSRDY 116


>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  200 bits (508), Expect = 3e-49
 Identities = 102/137 (74%), Positives = 108/137 (78%)
 Frame = -1

Query: 736 MNAPDRYERFVVPDGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQXXXXXXXXXXX 557
           MNAPDRYERFVVP+GTKKVSYERDTKIINAASFTVEREDHTIGNILRMQ           
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQL---------- 50

Query: 556 XXXXXXXXXXXHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQAINDLDKELS 377
                      HRD NVLFAGYKLPHPLQYKII+RIHT SQSSPMQAYNQAINDLDKEL 
Sbjct: 51  -----------HRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELD 99

Query: 376 HLKGVFEEEVLKHSRDF 326
           +LK  FE E+ KHSR++
Sbjct: 100 YLKNAFEVELAKHSREY 116


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  198 bits (504), Expect = 9e-49
 Identities = 102/137 (74%), Positives = 106/137 (77%)
 Frame = -1

Query: 736 MNAPDRYERFVVPDGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQXXXXXXXXXXX 557
           MNAPDRYERFVVP+GTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQ           
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQL---------- 50

Query: 556 XXXXXXXXXXXHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQAINDLDKELS 377
                      HRD NVLFAGYKLPHPLQYKIIVRIHT SQSSPMQAYNQAINDLDKEL 
Sbjct: 51  -----------HRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELD 99

Query: 376 HLKGVFEEEVLKHSRDF 326
           HLK  FE E  K SRD+
Sbjct: 100 HLKNAFEAEFAKFSRDY 116