BLASTX nr result
ID: Coptis21_contig00016095
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016095 (1057 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36740.1| unknown [Lotus japonicus] 218 2e-54 ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm... 218 2e-54 ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul... 216 1e-53 emb|CBI33909.3| unnamed protein product [Vitis vinifera] 215 2e-53 ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera] 215 2e-53 >gb|AFK36740.1| unknown [Lotus japonicus] Length = 145 Score = 218 bits (556), Expect = 2e-54 Identities = 105/126 (83%), Positives = 109/126 (86%) Frame = +3 Query: 405 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 584 NGAQSQLVCSGCRNLL+YPVGATS GTEMAQLVCGGCHTLLMYIRG Sbjct: 20 NGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIRG 79 Query: 585 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 764 ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVG S STT Sbjct: 80 ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGTSASTT 139 Query: 765 EQKFNT 782 EQKF+T Sbjct: 140 EQKFST 145 >ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis] gi|223532335|gb|EEF34134.1| conserved hypothetical protein [Ricinus communis] Length = 147 Score = 218 bits (556), Expect = 2e-54 Identities = 104/126 (82%), Positives = 109/126 (86%) Frame = +3 Query: 405 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 584 NGAQSQLVCSGCRNLLLYP GATS GTEMAQLVCGGCHTLLMYIRG Sbjct: 22 NGAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 81 Query: 585 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 764 ATSVQCSCCHT+NLAMEANQVAHVNCGNCRMLLMYQYGARSVKC+VC+FVT+VGAS STT Sbjct: 82 ATSVQCSCCHTINLAMEANQVAHVNCGNCRMLLMYQYGARSVKCSVCNFVTAVGASTSTT 141 Query: 765 EQKFNT 782 EQKFN+ Sbjct: 142 EQKFNS 147 >ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula] gi|217075072|gb|ACJ85896.1| unknown [Medicago truncatula] gi|217075520|gb|ACJ86120.1| unknown [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc finger protein LSD1 [Medicago truncatula] gi|388499772|gb|AFK37952.1| unknown [Medicago truncatula] gi|388500106|gb|AFK38119.1| unknown [Medicago truncatula] Length = 154 Score = 216 bits (549), Expect = 1e-53 Identities = 106/127 (83%), Positives = 110/127 (86%), Gaps = 1/127 (0%) Frame = +3 Query: 405 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 584 NGAQSQLVCSGCRNLL+YPVGATS GTEMAQLVCGGCHTLLMYIRG Sbjct: 28 NGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 87 Query: 585 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 764 ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS STT Sbjct: 88 ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASASTT 147 Query: 765 E-QKFNT 782 E QKF+T Sbjct: 148 EPQKFST 154 >emb|CBI33909.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 215 bits (547), Expect = 2e-53 Identities = 103/125 (82%), Positives = 107/125 (85%) Frame = +3 Query: 405 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 584 NGAQSQLVCSGCRNLLLYPVGA S GTEMAQLVCGGCHTLLMYIRG Sbjct: 105 NGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRG 164 Query: 585 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 764 ATSVQCSCCHT+NLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS S+T Sbjct: 165 ATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSST 224 Query: 765 EQKFN 779 E KFN Sbjct: 225 EHKFN 229 >ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera] Length = 145 Score = 215 bits (547), Expect = 2e-53 Identities = 103/125 (82%), Positives = 107/125 (85%) Frame = +3 Query: 405 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 584 NGAQSQLVCSGCRNLLLYPVGA S GTEMAQLVCGGCHTLLMYIRG Sbjct: 20 NGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRG 79 Query: 585 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 764 ATSVQCSCCHT+NLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS S+T Sbjct: 80 ATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSST 139 Query: 765 EQKFN 779 E KFN Sbjct: 140 EHKFN 144