BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016091
         (1394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-17
ref|NP_190721.3| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    69   3e-09
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    68   5e-09
ref|NP_175901.1| putative FBD-associated F-box protein [Arabidop...    66   2e-08
ref|XP_002877808.1| F-box family protein [Arabidopsis lyrata sub...    64   1e-07

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 95/325 (29%), Positives = 150/325 (46%), Gaps = 9/325 (2%)
 Frame = +2

Query: 8    CESLETLQITGKVHTAGDYFIRLPTLIRLSSLKVLHLKAVSFSCDQSSQEVSFSCANLEQ 187
            CE+L  L+I         Y ++LP+ I LS LK+L+L  V F+ D S+Q++ FS  NL +
Sbjct: 148  CETLTELEINMP------YILKLPSSISLSCLKILNLYEVIFTDDHSTQQL-FSLPNLVE 200

Query: 188  LVLKHCYWGEIKNVHISAPALKSL-LFVDLENSEVQ--NREIKIYTESLTSIKLKCNLAF 358
            L +  C W  +  V ISAP L+SL +    ++S        ++I+   L    +   L+ 
Sbjct: 201  LEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADFTIIGTLSN 260

Query: 359  KLSLCKXXXXXXXXXXXXXX---KEIGDPVSKILKAVCNVRDLTLSSSSVAVISD-PDCI 526
               L +                 ++     SK+L+ + + + L L+++ V V+ D P+ +
Sbjct: 261  DYCLYESSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDVLDDAPELL 320

Query: 527  GHLVKFSSLVCLKVMGFNNALNDPIRSNIRQLIDLLCHLPNMKFLLLEYDSIGWNFEEGE 706
               ++F +L  L      + L+         +I    HL  ++F  +    +  N  E  
Sbjct: 321  AFPLEFRNLTSLLFESEESNLHS---DGFWHIIYNSPHLIALQFYGVSMPKVPSNCRED- 376

Query: 707  DGGDLETIPPRNLLCLKSVEFKVFHGNRYELYLVKYLLKNAIALEKMTIISSSTLSADP- 883
                L+  PP  L CLK ++   F G+  EL  V +LLKNA ALE M II S +   D  
Sbjct: 377  --WTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQG 434

Query: 884  -MKQLKITKQLLVHPRGSTCGQIKF 955
              K  +I +QLL  PR S  G I F
Sbjct: 435  VDKTNEIHQQLLALPRWSEIGNINF 459


>ref|NP_190721.3| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75276325|sp|Q501E9.1|FDL20_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At3g51530
           gi|63003802|gb|AAY25430.1| At3g51530 [Arabidopsis
           thaliana] gi|110739329|dbj|BAF01577.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|115646881|gb|ABJ17151.1| At3g51530 [Arabidopsis
           thaliana] gi|332645282|gb|AEE78803.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 455

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 6/305 (1%)
 Frame = +2

Query: 11  ESLETLQITGKVHTAGDY-FIRLPTLIRLSSLKVLHLKAVSFSCDQSSQEVSFSCANLEQ 187
           ++LETL++        DY +I +P  + + SL+ LHL +V +  D+S   +  SC NLE 
Sbjct: 152 DTLETLKL--------DYVYIYVPCPVSMKSLRTLHLLSVVYKGDESGHNLFASCPNLEH 203

Query: 188 LVLKH-CYWGEIKNVHISAPALKSLLFVDLENSEVQNREIKIYTESLTSIKLKCNLAFKL 364
           LVL+   ++  + N  I AP+LK+LL  D  ++   +R   I   SL  + ++    F+ 
Sbjct: 204 LVLRRGFFFDAVVNFIIDAPSLKTLLLSDPFSARESSRGYVIKAPSLKYLGIESVEGFEY 263

Query: 365 SLCKXXXXXXXXXXXXXXKEIGDPVSKILKAVCNVRDLTLSSSSVAVISDPDCIGHLVKF 544
            L +              K + +    IL ++ + + L+L  S + +    + + H + +
Sbjct: 264 FLIENVTELVEANIRNVSKIVNE---NILGSLKSAKRLSLDLSPLKITYPTEVMYHQLVY 320

Query: 545 SSLVCLKVMGFN---NALNDPIRSNIRQLIDLLCHLPNMKFLLLEYDSIGWNFEEGEDGG 715
             +   KV  +N   + L+   +  + +LID      N++F     D   WN        
Sbjct: 321 LEMHTHKVEWWNLLTHMLDSSPKLQVLKLIDRETRHENLEFDKKYKDQGKWN-------- 372

Query: 716 DLETIPPRNLLCLKSVEFKVFH-GNRYELYLVKYLLKNAIALEKMTIISSSTLSADPMKQ 892
             + +P     CL++  ++  + G   E  +  Y+L+NA  L+K      +T S DP++ 
Sbjct: 373 QPKYVPE----CLETFMWRNCNWGREEEKEVATYILRNARQLKK------ATFSTDPIEA 422

Query: 893 LKITK 907
            ++ K
Sbjct: 423 KRLCK 427


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 17/304 (5%)
 Frame = +2

Query: 74   LPTLIRLSSLKVLHLKAVSFSCDQSSQEVSFSCANLEQLVLKHCYWGEIKNVHISAPALK 253
            +P  I   SLK+L    V+F+ ++S+Q +   C  L+ L  + CYW  I N+ ++ P LK
Sbjct: 164  VPDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNI-NISVAIPTLK 222

Query: 254  SL-LFVDLENSEVQNREIKIYTESLTSIKLK------CNLAFKLSLCKXXXXXXXXXXXX 412
             L +F    + +  +   KI   +L S+  K      C L    S+              
Sbjct: 223  KLDIFFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQN 282

Query: 413  XXKEIGDPVSKILKAVCNVRDLTLSSSSVAVISDPDCIGHLV-KFSSLVCLKVMGFNNAL 589
                +     ++   + +V  L LS  ++  ++      HL+  F +L  L+V       
Sbjct: 283  NELHVAVFAIELFSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVH-----F 337

Query: 590  NDPIRSNIRQLIDLLCHLPNMKFLLL---------EYDSIGWNFEEGEDGGDLETIPPRN 742
            +DP   +   L D+L   P ++FL +          + S  +   + ED    +++P   
Sbjct: 338  DDP---SCEVLADILRKSPKLEFLHIYGVHLVSCSRFSSGSYLSLDSEDWTS-DSLPCCF 393

Query: 743  LLCLKSVEFKVFHGNRYELYLVKYLLKNAIALEKMTIISSSTLSADPMKQLKITKQLLVH 922
               LKS +   F G+  E+ LVK+LL+N   L +M I  +  LS    K   +  QL   
Sbjct: 394  KSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIYCTGYLSKKSKKLADVRNQLQAL 453

Query: 923  PRGS 934
              GS
Sbjct: 454  GMGS 457


>ref|NP_175901.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75268248|sp|Q9C7M1.1|FBD2_ARATH RecName:
           Full=Putative FBD-associated F-box protein At1g55030
           gi|12322151|gb|AAG51107.1|AC069144_4 hypothetical
           protein [Arabidopsis thaliana]
           gi|332195055|gb|AEE33176.1| putative FBD-associated
           F-box protein [Arabidopsis thaliana]
          Length = 422

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
 Frame = +2

Query: 8   CESLETLQITGKVHTAGDYFIRLPTLIRLSSLKVLHLKAVSFSCDQSSQEVSFSCANLEQ 187
           CE+LETL++   V       + +P  + L SLK L+L AV F  D+S   +   C NL+ 
Sbjct: 130 CETLETLELILNV------VMDVPPSVYLKSLKTLYLLAVDFKDDESVINLLSGCPNLQD 183

Query: 188 LVLKHCYWGEIKNVHISAPALKSLLFVDLENSEVQNREIKIYTESLTSIKLKCNLAFKLS 367
           LV++      +K   I+ P+L+ L  +   +   Q+    I T SL  +KL+ + AF+  
Sbjct: 184 LVMRRNSSSNVKTFTIAVPSLQRLA-IHNGSGTPQHCGYTINTPSLKYLKLEGSKAFESF 242

Query: 368 LCKXXXXXXXXXXXXXXKEIGDPVSKILKAVCNVRDLTLSSSSVAVISDPDCIGHLVKFS 547
           + +              + I + +   L +V  +  L LS S   V + P  I     F+
Sbjct: 243 MVENVSELIEVNITDVSEIIDEKLRVFLTSVTRL-SLALSPS---VFTFPTGI----IFN 294

Query: 548 SLVCLKVMGFNNALNDPIRSNIRQLIDLLCH-LPNMKFLLLEYDSIGWNFEEGEDGGDLE 724
            LV L++           +++  +L+ L+ H  P ++ L L  D+ G N+ E       E
Sbjct: 295 QLVYLEIC--------TNKTSWWKLLPLMLHSSPKLQVLKLIDDTDGMNYVEASG----E 342

Query: 725 TIPPRNL-LCLKSVEFKVFHG---NRYELYLVKYLLKNAIALEKMTIISSSTLSAD 880
              P+N+  CL  +E  ++ G    R E+ + KY+LKN   L K  I S   +S++
Sbjct: 343 WNQPKNVPECLHHLEKFIWEGYKWKREEIEVAKYILKNTNRL-KRAIFSLKGISSE 397


>ref|XP_002877808.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323646|gb|EFH54067.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 446

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 70/304 (23%), Positives = 138/304 (45%), Gaps = 5/304 (1%)
 Frame = +2

Query: 11  ESLETLQITGKVHTAGDYFIRLPTLIRLSSLKVLHLKAVSFSCDQSSQEVSFSCANLEQL 190
           ++LETL++   V      ++  P+L+ + SL+ LHL ++ +  D+S   +  SC NLE L
Sbjct: 139 DTLETLKLMNYV------YLDFPSLVSMKSLRTLHLLSLVYKGDESVHNLFSSCPNLEHL 192

Query: 191 VLKHCYWGE-IKNVHISAPALKSLLFVDLENSEVQNREIKIYTESLTSIKLKCNLAFKLS 367
           VL+  +  + +KN  I AP+LK+L   D   +   +  + I   SL  + ++    ++  
Sbjct: 193 VLRRGFSHDYVKNFTIEAPSLKTLSLSDSFRARESSGYV-IKAPSLKYLGIESVEGYEFF 251

Query: 368 LCKXXXXXXXXXXXXXXKEIGDPVSKILKAVCNVRDLTLSSSSVAVISDPDCIGHLVKFS 547
           L +              K + +   KIL ++ + + L+L  S + +    + + H + + 
Sbjct: 252 LIENASELVEASIRNVSKIVNE---KILGSLESAKRLSLDLSPLKITYPTEVMYHQLVYL 308

Query: 548 SLVCLKVMGFNN---ALNDPIRSNIRQLIDLLCHLPNMKFLLLEYDSIGWNFEEGEDGGD 718
            +   KV  +N     L+   +  + +LID      N++F     D   WN         
Sbjct: 309 EMHTHKVEWWNMLTVMLDSSPKLQVLKLIDHETRQENLEFNKQYTDQGEWN--------Q 360

Query: 719 LETIPPRNLLCLKSVEFKVFH-GNRYELYLVKYLLKNAIALEKMTIISSSTLSADPMKQL 895
            + +P   +  L++  ++  + G   E  +  Y+L+NA  L+K      +T S DP++  
Sbjct: 361 PKYVPECLMSHLETFMWRNCNWGREEEKEVATYILRNAGQLKK------ATFSTDPIESK 414

Query: 896 KITK 907
           ++ K
Sbjct: 415 RLCK 418