BLASTX nr result

ID: Coptis21_contig00016088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016088
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vini...   309   5e-82
emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]   309   5e-82
ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis...   307   1e-81
emb|CBI17064.3| unnamed protein product [Vitis vinifera]              307   1e-81
ref|XP_004160104.1| PREDICTED: histone deacetylase 9-like [Cucum...   304   2e-80

>ref|XP_002266492.1| PREDICTED: histone deacetylase 9 [Vitis vinifera]
           gi|297734674|emb|CBI16725.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  309 bits (791), Expect = 5e-82
 Identities = 145/160 (90%), Positives = 155/160 (96%)
 Frame = -3

Query: 785 VIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVE 606
           VIVLQCGADSLAGDRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVE
Sbjct: 253 VIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312

Query: 605 TGVLLDTDLPNEIPDNDYIKYFGPDYSLKIPNGNFENLNSKSYISTIKAQVLESLRYIQH 426
           TGVLLDT+LPNEIP+N+YIKYF P+YSLKIPNG+ ENLNSKSYI TIK QVLE+LR IQH
Sbjct: 313 TGVLLDTELPNEIPENEYIKYFAPEYSLKIPNGHIENLNSKSYIGTIKMQVLENLRCIQH 372

Query: 425 APSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQDKQIQR 306
           APSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+D+QIQR
Sbjct: 373 APSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTRDRQIQR 412


>emb|CAN77816.1| hypothetical protein VITISV_020659 [Vitis vinifera]
          Length = 430

 Score =  309 bits (791), Expect = 5e-82
 Identities = 145/160 (90%), Positives = 155/160 (96%)
 Frame = -3

Query: 785 VIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVE 606
           VIVLQCGADSLAGDRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVE
Sbjct: 253 VIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 312

Query: 605 TGVLLDTDLPNEIPDNDYIKYFGPDYSLKIPNGNFENLNSKSYISTIKAQVLESLRYIQH 426
           TGVLLDT+LPNEIP+N+YIKYF P+YSLKIPNG+ ENLNSKSYI TIK QVLE+LR IQH
Sbjct: 313 TGVLLDTELPNEIPENEYIKYFAPEYSLKIPNGHIENLNSKSYIGTIKMQVLENLRCIQH 372

Query: 425 APSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQDKQIQR 306
           APSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+D+QIQR
Sbjct: 373 APSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTRDRQIQR 412


>ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis vinifera]
          Length = 458

 Score =  307 bits (787), Expect = 1e-81
 Identities = 144/160 (90%), Positives = 155/160 (96%)
 Frame = -3

Query: 785 VIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVE 606
           VIVLQCGADSLAGDRLGCFNLSIDGHAECV+ VKKFNLPLLVTGGGGYTKENVARCWTVE
Sbjct: 281 VIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGYTKENVARCWTVE 340

Query: 605 TGVLLDTDLPNEIPDNDYIKYFGPDYSLKIPNGNFENLNSKSYISTIKAQVLESLRYIQH 426
           TGVLLDT+LPNEIP+N+YIKYFGP++SLKIPNG+ ENLNSKSY+ TIK QVLE+LR IQH
Sbjct: 341 TGVLLDTELPNEIPENEYIKYFGPEHSLKIPNGHIENLNSKSYLGTIKQQVLENLRCIQH 400

Query: 425 APSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQDKQIQR 306
           APSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+DKQIQR
Sbjct: 401 APSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTKDKQIQR 440


>emb|CBI17064.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  307 bits (787), Expect = 1e-81
 Identities = 144/160 (90%), Positives = 155/160 (96%)
 Frame = -3

Query: 785 VIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVE 606
           VIVLQCGADSLAGDRLGCFNLSIDGHAECV+ VKKFNLPLLVTGGGGYTKENVARCWTVE
Sbjct: 253 VIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGYTKENVARCWTVE 312

Query: 605 TGVLLDTDLPNEIPDNDYIKYFGPDYSLKIPNGNFENLNSKSYISTIKAQVLESLRYIQH 426
           TGVLLDT+LPNEIP+N+YIKYFGP++SLKIPNG+ ENLNSKSY+ TIK QVLE+LR IQH
Sbjct: 313 TGVLLDTELPNEIPENEYIKYFGPEHSLKIPNGHIENLNSKSYLGTIKQQVLENLRCIQH 372

Query: 425 APSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQDKQIQR 306
           APSVQMQEVPPDFYIPDFDED+QNPDERVDQHT+DKQIQR
Sbjct: 373 APSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTKDKQIQR 412


>ref|XP_004160104.1| PREDICTED: histone deacetylase 9-like [Cucumis sativus]
          Length = 248

 Score =  304 bits (778), Expect = 2e-80
 Identities = 141/160 (88%), Positives = 154/160 (96%)
 Frame = -3

Query: 785 VIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVE 606
           VIVLQCGADSLAGDRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVE
Sbjct: 71  VIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVE 130

Query: 605 TGVLLDTDLPNEIPDNDYIKYFGPDYSLKIPNGNFENLNSKSYISTIKAQVLESLRYIQH 426
           TGVLLDT+LPNEIPDN+YIKYF PD+ L+IPNG+ ENLN+KSY+STIK QVLE+LR+IQH
Sbjct: 131 TGVLLDTELPNEIPDNEYIKYFSPDHLLRIPNGHMENLNTKSYLSTIKTQVLENLRFIQH 190

Query: 425 APSVQMQEVPPDFYIPDFDEDDQNPDERVDQHTQDKQIQR 306
           AP VQMQEVPPDFYIPDFDED QNPDER+++HTQDKQIQR
Sbjct: 191 APGVQMQEVPPDFYIPDFDEDGQNPDERMNRHTQDKQIQR 230


Top