BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016086
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...    77   1e-12
emb|CBI41034.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...    77   1e-12
ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    76   3e-12
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...    76   3e-12

>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -1

Query: 473 VVSTDTGTDKAKWTAQHKKFLVHPRWIEAANYFWKRQSEEKFAVNPVQKK 324
           VVSTD GT+K++W  Q KKFLVHP WIEAANYFW++Q EE F VN  QKK
Sbjct: 229 VVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPVN--QKK 276


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -1

Query: 473 VVSTDTGTDKAKWTAQHKKFLVHPRWIEAANYFWKRQSEEKFAVNPVQKK 324
           VVSTD GT+K++W  Q KKFLVHP WIEAANYFW++Q EE F VN  QKK
Sbjct: 215 VVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPVN--QKK 262


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -1

Query: 473 VVSTDTGTDKAKWTAQHKKFLVHPRWIEAANYFWKRQSEEKFAVNPVQKK 324
           VVSTD GT+K++W  Q KKFLVHP WIEAANYFW++Q EE F VN  QKK
Sbjct: 229 VVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPVN--QKK 276


>ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 4-like, partial [Cucumis sativus]
          Length = 340

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -1

Query: 473 VVSTDTGTDKAKWTAQHKKFLVHPRWIEAANYFWKRQSEEKFAV 342
           VV+TD GT+K++W  + KKFLVHPRWIEA+NYFWKRQ EE F V
Sbjct: 286 VVATDAGTEKSRWALKEKKFLVHPRWIEASNYFWKRQMEENFTV 329


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -1

Query: 473 VVSTDTGTDKAKWTAQHKKFLVHPRWIEAANYFWKRQSEEKFAV 342
           VV+TD GT+K++W  + KKFLVHPRWIEA+NYFWKRQ EE F V
Sbjct: 398 VVATDAGTEKSRWALKEKKFLVHPRWIEASNYFWKRQMEENFTV 441