BLASTX nr result
ID: Coptis21_contig00016062
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016062 (521 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2... 233 9e-60 gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum] 224 6e-57 ref|XP_002892589.1| P-glycoprotein 10 [Arabidopsis lyrata subsp.... 223 1e-56 ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2... 223 1e-56 ref|XP_003612850.1| ABC transporter B family member [Medicago tr... 221 6e-56 >ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max] Length = 1247 Score = 233 bits (595), Expect = 9e-60 Identities = 112/135 (82%), Positives = 126/135 (93%) Frame = -3 Query: 405 VPFLKLFSFADSLDCILMAAGSLGACVHGVSVPVFFIFFGKLINVIGIAYLDPSSASHKV 226 VPFLKLFSFAD DC+LMA G++GACVHG SVPVFF+FFGK+INVIG+AYL P ASH+V Sbjct: 20 VPFLKLFSFADFYDCVLMAIGTVGACVHGASVPVFFVFFGKIINVIGLAYLFPKEASHEV 79 Query: 225 SKYALDFVYLSIAMLFSSWTEVACWMYTGERQASKMRMAYLRSMLNQDISLFDTESSKGE 46 SKYALDFVYLSIA+LFSSWTEVACWM+TGERQA+KMRMAYLRSMLNQDISLFDTE+S GE Sbjct: 80 SKYALDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEASTGE 139 Query: 45 VTAAITSDIIVIQDA 1 V ++ITSDIIV+QDA Sbjct: 140 VISSITSDIIVVQDA 154 >gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum] Length = 1249 Score = 224 bits (571), Expect = 6e-57 Identities = 109/135 (80%), Positives = 122/135 (90%) Frame = -3 Query: 405 VPFLKLFSFADSLDCILMAAGSLGACVHGVSVPVFFIFFGKLINVIGIAYLDPSSASHKV 226 VP LKLFSFAD D +LM GSLGACVHG SVPVFFIFFGKLIN+IG+AYL P ASHKV Sbjct: 28 VPLLKLFSFADFYDHVLMGLGSLGACVHGASVPVFFIFFGKLINIIGMAYLFPKEASHKV 87 Query: 225 SKYALDFVYLSIAMLFSSWTEVACWMYTGERQASKMRMAYLRSMLNQDISLFDTESSKGE 46 +KY+LDFVYLS+A+LFSSW EVACWM+TGERQA+KMRMAYL+SMLNQDISLFDTE+S GE Sbjct: 88 AKYSLDFVYLSVAILFSSWIEVACWMHTGERQAAKMRMAYLKSMLNQDISLFDTEASTGE 147 Query: 45 VTAAITSDIIVIQDA 1 V +AITSDIIV+QDA Sbjct: 148 VISAITSDIIVVQDA 162 >ref|XP_002892589.1| P-glycoprotein 10 [Arabidopsis lyrata subsp. lyrata] gi|297338431|gb|EFH68848.1| P-glycoprotein 10 [Arabidopsis lyrata subsp. lyrata] Length = 1229 Score = 223 bits (569), Expect = 1e-56 Identities = 106/135 (78%), Positives = 122/135 (90%) Frame = -3 Query: 405 VPFLKLFSFADSLDCILMAAGSLGACVHGVSVPVFFIFFGKLINVIGIAYLDPSSASHKV 226 V FLKLFSFAD DC+LMA GS+GAC+HG SVPVFFIFFGKLIN+IG+AYL P ASHKV Sbjct: 25 VSFLKLFSFADFYDCVLMALGSIGACIHGASVPVFFIFFGKLINIIGLAYLFPQEASHKV 84 Query: 225 SKYALDFVYLSIAMLFSSWTEVACWMYTGERQASKMRMAYLRSMLNQDISLFDTESSKGE 46 +KY+LDFVYLS+ +LFSSW EVACWM+TGERQA+KMR AYLRSML+QDISLFDTE+S GE Sbjct: 85 AKYSLDFVYLSVVILFSSWLEVACWMHTGERQAAKMRKAYLRSMLSQDISLFDTETSTGE 144 Query: 45 VTAAITSDIIVIQDA 1 V +AITSDI+V+QDA Sbjct: 145 VISAITSDILVVQDA 159 >ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera] gi|297742073|emb|CBI33860.3| unnamed protein product [Vitis vinifera] Length = 1243 Score = 223 bits (569), Expect = 1e-56 Identities = 105/135 (77%), Positives = 124/135 (91%) Frame = -3 Query: 405 VPFLKLFSFADSLDCILMAAGSLGACVHGVSVPVFFIFFGKLINVIGIAYLDPSSASHKV 226 VP LKLF+FAD DC LMA GS+GAC+HG SVPVFFIFFGKLI++IG+AYL P++ASHKV Sbjct: 23 VPLLKLFAFADLYDCFLMAVGSVGACIHGASVPVFFIFFGKLIDIIGLAYLFPAAASHKV 82 Query: 225 SKYALDFVYLSIAMLFSSWTEVACWMYTGERQASKMRMAYLRSMLNQDISLFDTESSKGE 46 +KY+LDFVYLS+ +LFSSW EVACWM+TGERQA+KMRMAY+RSMLNQDISLFDTE++ GE Sbjct: 83 AKYSLDFVYLSLVILFSSWAEVACWMHTGERQAAKMRMAYVRSMLNQDISLFDTEATTGE 142 Query: 45 VTAAITSDIIVIQDA 1 V +AITSDIIV+QDA Sbjct: 143 VISAITSDIIVVQDA 157 >ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula] gi|355514185|gb|AES95808.1| ABC transporter B family member [Medicago truncatula] Length = 1234 Score = 221 bits (562), Expect = 6e-56 Identities = 107/135 (79%), Positives = 122/135 (90%) Frame = -3 Query: 405 VPFLKLFSFADSLDCILMAAGSLGACVHGVSVPVFFIFFGKLINVIGIAYLDPSSASHKV 226 V LKLFSFADS D +LM GS+GA VHG SVP+FFIFFGKLINVIG+AYL P ASHKV Sbjct: 15 VSMLKLFSFADSYDYVLMFIGSIGAIVHGASVPIFFIFFGKLINVIGLAYLFPKEASHKV 74 Query: 225 SKYALDFVYLSIAMLFSSWTEVACWMYTGERQASKMRMAYLRSMLNQDISLFDTESSKGE 46 +KY+LDFVYLS+A+LFSSWTEVACWM+TGERQA+KMRMAYL+SMLNQDISLFDTE+S GE Sbjct: 75 AKYSLDFVYLSVAILFSSWTEVACWMHTGERQAAKMRMAYLKSMLNQDISLFDTEASTGE 134 Query: 45 VTAAITSDIIVIQDA 1 V +AITSDII++QDA Sbjct: 135 VISAITSDIIIVQDA 149