BLASTX nr result

ID: Coptis21_contig00016051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016051
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17224.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetas...    96   3e-18
ref|XP_002268996.1| PREDICTED: probable methionyl-tRNA synthetas...    95   7e-18
ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinu...    94   9e-18
dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare]     94   1e-17

>emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -3

Query: 279  VELVDPPHSVPVGERVKFPGFQGEPINGYVN--LNVFEKLQADLHTDMELVACYKDAPFT 106
            VELV+PP S  VGERV FPGF+GEP +  +N    V+E LQ DL TD ELVA YKD PFT
Sbjct: 874  VELVEPPQSAAVGERVTFPGFEGEP-DDVLNPKKKVWETLQVDLRTDSELVALYKDVPFT 932

Query: 105  TSTGVCKVLSICSGAIR 55
            T+ G+CKV SIC G+IR
Sbjct: 933  TTAGICKVSSICDGSIR 949


>ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
          Length = 807

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -3

Query: 279 VELVDPPHSVPVGERVKFPGFQGEPINGYVN--LNVFEKLQADLHTDMELVACYKDAPFT 106
           VELV+PP S  VGERV FPGF+GEP +  +N    V+E LQ DL TD ELVA YKD PFT
Sbjct: 732 VELVEPPQSAAVGERVTFPGFEGEP-DDVLNPKKKVWETLQVDLRTDSELVALYKDVPFT 790

Query: 105 TSTGVCKVLSICSGAIR 55
           T+ G+CKV SIC G+IR
Sbjct: 791 TTAGICKVSSICDGSIR 807


>ref|XP_002268996.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
           gi|296081059|emb|CBI18340.3| unnamed protein product
           [Vitis vinifera]
          Length = 804

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -3

Query: 279 VELVDPPHSVPVGERVKFPGFQGEPINGYV-NLNVFEKLQADLHTDMELVACYKDAPFTT 103
           VELV+PPHS  VGERV FPGF+G+P    +    ++E LQ+DLHTD++L A YKD PFTT
Sbjct: 729 VELVEPPHSASVGERVTFPGFEGKPDRVLIPKKKIWETLQSDLHTDVQLFAFYKDVPFTT 788

Query: 102 STGVCKVLSICSGAI 58
           S GVCKV SI +G I
Sbjct: 789 SAGVCKVKSISNGVI 803


>ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinus communis]
           gi|223542652|gb|EEF44189.1| methionine-tRNA synthetase,
           putative [Ricinus communis]
          Length = 678

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/77 (64%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -3

Query: 279 VELVDPPHSVPVGERVKFPGFQGEPINGYVN--LNVFEKLQADLHTDMELVACYKDAPFT 106
           VELVDPP S  VGERV FPGF+GE  +G +N    V+E LQ D  T+ +LVACYKD PFT
Sbjct: 603 VELVDPPESAVVGERVTFPGFEGES-DGVLNPKKKVWETLQVDFQTNTDLVACYKDIPFT 661

Query: 105 TSTGVCKVLSICSGAIR 55
           TS GVCKV SI SG+IR
Sbjct: 662 TSAGVCKVASIQSGSIR 678


>dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -3

Query: 279 VELVDPPHSVPVGERVKFPGFQGEPINGY-VNLNVFEKLQADLHTDMELVACYKDAPFTT 103
           VELV+PP S  VGERV F GF GEP          +EKL ADLH++ ELVACYKD PFTT
Sbjct: 726 VELVEPPESAAVGERVTFAGFSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTT 785

Query: 102 STGVCKVLSICSGAIR 55
           S GVCKV +I +GAIR
Sbjct: 786 SAGVCKVKTIANGAIR 801


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