BLASTX nr result

ID: Coptis21_contig00016039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016039
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   201   4e-50
ref|XP_002524240.1| protein with unknown function [Ricinus commu...   201   7e-50
ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativ...   182   3e-44

>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  201 bits (512), Expect = 4e-50
 Identities = 108/172 (62%), Positives = 127/172 (73%), Gaps = 20/172 (11%)
 Frame = -1

Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVT----SLVGAVPGTRNLG 294
           +SLCWQRSKP IV+E NC+ ETALLGGA EDSILMPDPLPSVT    SL  A+P +RN G
Sbjct: 312 TSLCWQRSKPVIVNESNCTPETALLGGAVEDSILMPDPLPSVTSSSLSLSTAIPASRNPG 371

Query: 293 RSSLSIDAPSV-------------LSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDME 156
           RS  S +  S+             LS  E+TP +NHL  GGTL+RLHAPR+  +FKDDME
Sbjct: 372 RSGPSTETSSLTAASGGSVSSSLYLSTEEETPQKNHLRPGGTLARLHAPRSNYNFKDDME 431

Query: 155 VFSPLVDVQPITPSVDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6
           VFSPLVD+QPITPS+DKLWD H+  KKD L  ++KP+SLLFPSS RRFPF +
Sbjct: 432 VFSPLVDIQPITPSLDKLWDNHEAAKKDHLPVDKKPSSLLFPSSSRRFPFVD 483


>ref|XP_002524240.1| protein with unknown function [Ricinus communis]
           gi|223536517|gb|EEF38164.1| protein with unknown
           function [Ricinus communis]
          Length = 799

 Score =  201 bits (510), Expect = 7e-50
 Identities = 110/172 (63%), Positives = 132/172 (76%), Gaps = 20/172 (11%)
 Frame = -1

Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVT----SLVGAVPGTRNLG 294
           +SLCWQRSKP +V+E NC+AETALLGGA EDSILMPDPLPSVT    SL   V  +RN G
Sbjct: 311 TSLCWQRSKPVVVNESNCTAETALLGGAIEDSILMPDPLPSVTLSSVSLSTVVSSSRNTG 370

Query: 293 RSSLSIDAPSV-------------LSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDME 156
           RSSLSI++ S+             LS AE+TPHRNHLW GGTLSRL+APR++ +FKDDM+
Sbjct: 371 RSSLSIESSSLTSTSSGSASSIASLSLAEETPHRNHLWLGGTLSRLNAPRSSYNFKDDMD 430

Query: 155 VFSPLVDVQPITPSVDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6
           VFSP+VDVQPITPS+DKLW  ++  KKD L  ++KP+S LF SS RRFPF+E
Sbjct: 431 VFSPVVDVQPITPSLDKLWGDNEGAKKDNLSVDKKPSS-LFSSSSRRFPFSE 481


>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  186 bits (473), Expect = 1e-45
 Identities = 101/158 (63%), Positives = 123/158 (77%), Gaps = 6/158 (3%)
 Frame = -1

Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVTS---LVGAVPGTRNLGR 291
           + LCWQRSKP IV+E NC+AE ALLGGA +DSILMPDPLPSVTS    + +V G+  +G 
Sbjct: 312 TGLCWQRSKPVIVNESNCTAEIALLGGAVDDSILMPDPLPSVTSSSVALSSVSGSATVGG 371

Query: 290 SSLSIDAPSVLSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITPS 114
            + SI     LS AE+TPHR+HLW  GTL+RL+ PR++ +FKD+MEVFSPLVDVQPITPS
Sbjct: 372 PASSIPN---LSLAEETPHRSHLWP-GTLTRLNPPRSSYNFKDEMEVFSPLVDVQPITPS 427

Query: 113 VDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6
           +DK W  H+  KKD L  ++KP+SLLFPSS RRFPFAE
Sbjct: 428 LDKFWTDHEGLKKDNLPVDKKPSSLLFPSSSRRFPFAE 465


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  185 bits (470), Expect = 3e-45
 Identities = 100/159 (62%), Positives = 119/159 (74%), Gaps = 7/159 (4%)
 Frame = -1

Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVT----SLVGAVPGTRNLG 294
           +SLCWQRSKP IV+E NC+ ETALLGGA EDSILMPDPLPSVT    SL  A+P +RN G
Sbjct: 311 TSLCWQRSKPVIVNESNCTPETALLGGAVEDSILMPDPLPSVTSSSLSLSTAIPASRNPG 370

Query: 293 RSSLSIDAPSVLSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITP 117
           RS  S +  S+ +A+            GTL+RLHAPR+  +FKDDMEVFSPLVD+QPITP
Sbjct: 371 RSGPSTETSSLTAAS------------GTLARLHAPRSNYNFKDDMEVFSPLVDIQPITP 418

Query: 116 SVDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6
           S+DKLWD H+  KKD L  ++KP+SLLFPSS RRFPF +
Sbjct: 419 SLDKLWDNHEAAKKDHLPVDKKPSSLLFPSSSRRFPFVD 457


>ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativus]
           gi|449495290|ref|XP_004159790.1| PREDICTED: protein
           NEDD1-like [Cucumis sativus]
          Length = 799

 Score =  182 bits (461), Expect = 3e-44
 Identities = 102/164 (62%), Positives = 122/164 (74%), Gaps = 12/164 (7%)
 Frame = -1

Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVTSLVG---AVPGTRNLGR 291
           +SL WQR KP IV+E NC+AE ALLGGA EDSILMPDPLPSVT+  G   A  G+RN GR
Sbjct: 314 TSLSWQRLKPVIVNESNCTAEVALLGGAIEDSILMPDPLPSVTTSTGPLSATSGSRNPGR 373

Query: 290 SSLSIDA-----PSVLSAAEDTPHRNHLWTGGT--LSRLHAPRTT-DFKDDMEVFSPLVD 135
           S  + +A      S  S AE+TP R+HL +GG+  L+RLHAPR++ +FKDDMEVFSPLVD
Sbjct: 374 SGSTFEASLTETSSSFSTAEETPLRSHLRSGGSLALARLHAPRSSYNFKDDMEVFSPLVD 433

Query: 134 VQPITPSVDKLWDGHDEGKKDT-LERKPASLLFPSSMRRFPFAE 6
           VQPITPS+DKLWD H+  KKD   ++KP S+LFPSS RRF   E
Sbjct: 434 VQPITPSLDKLWDDHNGSKKDNPFDKKPLSMLFPSSSRRFSSIE 477


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