BLASTX nr result
ID: Coptis21_contig00016039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016039 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246... 201 4e-50 ref|XP_002524240.1| protein with unknown function [Ricinus commu... 201 7e-50 ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2... 186 1e-45 emb|CBI31609.3| unnamed protein product [Vitis vinifera] 185 3e-45 ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativ... 182 3e-44 >ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera] Length = 805 Score = 201 bits (512), Expect = 4e-50 Identities = 108/172 (62%), Positives = 127/172 (73%), Gaps = 20/172 (11%) Frame = -1 Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVT----SLVGAVPGTRNLG 294 +SLCWQRSKP IV+E NC+ ETALLGGA EDSILMPDPLPSVT SL A+P +RN G Sbjct: 312 TSLCWQRSKPVIVNESNCTPETALLGGAVEDSILMPDPLPSVTSSSLSLSTAIPASRNPG 371 Query: 293 RSSLSIDAPSV-------------LSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDME 156 RS S + S+ LS E+TP +NHL GGTL+RLHAPR+ +FKDDME Sbjct: 372 RSGPSTETSSLTAASGGSVSSSLYLSTEEETPQKNHLRPGGTLARLHAPRSNYNFKDDME 431 Query: 155 VFSPLVDVQPITPSVDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6 VFSPLVD+QPITPS+DKLWD H+ KKD L ++KP+SLLFPSS RRFPF + Sbjct: 432 VFSPLVDIQPITPSLDKLWDNHEAAKKDHLPVDKKPSSLLFPSSSRRFPFVD 483 >ref|XP_002524240.1| protein with unknown function [Ricinus communis] gi|223536517|gb|EEF38164.1| protein with unknown function [Ricinus communis] Length = 799 Score = 201 bits (510), Expect = 7e-50 Identities = 110/172 (63%), Positives = 132/172 (76%), Gaps = 20/172 (11%) Frame = -1 Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVT----SLVGAVPGTRNLG 294 +SLCWQRSKP +V+E NC+AETALLGGA EDSILMPDPLPSVT SL V +RN G Sbjct: 311 TSLCWQRSKPVVVNESNCTAETALLGGAIEDSILMPDPLPSVTLSSVSLSTVVSSSRNTG 370 Query: 293 RSSLSIDAPSV-------------LSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDME 156 RSSLSI++ S+ LS AE+TPHRNHLW GGTLSRL+APR++ +FKDDM+ Sbjct: 371 RSSLSIESSSLTSTSSGSASSIASLSLAEETPHRNHLWLGGTLSRLNAPRSSYNFKDDMD 430 Query: 155 VFSPLVDVQPITPSVDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6 VFSP+VDVQPITPS+DKLW ++ KKD L ++KP+S LF SS RRFPF+E Sbjct: 431 VFSPVVDVQPITPSLDKLWGDNEGAKKDNLSVDKKPSS-LFSSSSRRFPFSE 481 >ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1| predicted protein [Populus trichocarpa] Length = 785 Score = 186 bits (473), Expect = 1e-45 Identities = 101/158 (63%), Positives = 123/158 (77%), Gaps = 6/158 (3%) Frame = -1 Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVTS---LVGAVPGTRNLGR 291 + LCWQRSKP IV+E NC+AE ALLGGA +DSILMPDPLPSVTS + +V G+ +G Sbjct: 312 TGLCWQRSKPVIVNESNCTAEIALLGGAVDDSILMPDPLPSVTSSSVALSSVSGSATVGG 371 Query: 290 SSLSIDAPSVLSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITPS 114 + SI LS AE+TPHR+HLW GTL+RL+ PR++ +FKD+MEVFSPLVDVQPITPS Sbjct: 372 PASSIPN---LSLAEETPHRSHLWP-GTLTRLNPPRSSYNFKDEMEVFSPLVDVQPITPS 427 Query: 113 VDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6 +DK W H+ KKD L ++KP+SLLFPSS RRFPFAE Sbjct: 428 LDKFWTDHEGLKKDNLPVDKKPSSLLFPSSSRRFPFAE 465 >emb|CBI31609.3| unnamed protein product [Vitis vinifera] Length = 779 Score = 185 bits (470), Expect = 3e-45 Identities = 100/159 (62%), Positives = 119/159 (74%), Gaps = 7/159 (4%) Frame = -1 Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVT----SLVGAVPGTRNLG 294 +SLCWQRSKP IV+E NC+ ETALLGGA EDSILMPDPLPSVT SL A+P +RN G Sbjct: 311 TSLCWQRSKPVIVNESNCTPETALLGGAVEDSILMPDPLPSVTSSSLSLSTAIPASRNPG 370 Query: 293 RSSLSIDAPSVLSAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITP 117 RS S + S+ +A+ GTL+RLHAPR+ +FKDDMEVFSPLVD+QPITP Sbjct: 371 RSGPSTETSSLTAAS------------GTLARLHAPRSNYNFKDDMEVFSPLVDIQPITP 418 Query: 116 SVDKLWDGHDEGKKDTL--ERKPASLLFPSSMRRFPFAE 6 S+DKLWD H+ KKD L ++KP+SLLFPSS RRFPF + Sbjct: 419 SLDKLWDNHEAAKKDHLPVDKKPSSLLFPSSSRRFPFVD 457 >ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativus] gi|449495290|ref|XP_004159790.1| PREDICTED: protein NEDD1-like [Cucumis sativus] Length = 799 Score = 182 bits (461), Expect = 3e-44 Identities = 102/164 (62%), Positives = 122/164 (74%), Gaps = 12/164 (7%) Frame = -1 Query: 461 SSLCWQRSKPNIVSEINCSAETALLGGAGEDSILMPDPLPSVTSLVG---AVPGTRNLGR 291 +SL WQR KP IV+E NC+AE ALLGGA EDSILMPDPLPSVT+ G A G+RN GR Sbjct: 314 TSLSWQRLKPVIVNESNCTAEVALLGGAIEDSILMPDPLPSVTTSTGPLSATSGSRNPGR 373 Query: 290 SSLSIDA-----PSVLSAAEDTPHRNHLWTGGT--LSRLHAPRTT-DFKDDMEVFSPLVD 135 S + +A S S AE+TP R+HL +GG+ L+RLHAPR++ +FKDDMEVFSPLVD Sbjct: 374 SGSTFEASLTETSSSFSTAEETPLRSHLRSGGSLALARLHAPRSSYNFKDDMEVFSPLVD 433 Query: 134 VQPITPSVDKLWDGHDEGKKDT-LERKPASLLFPSSMRRFPFAE 6 VQPITPS+DKLWD H+ KKD ++KP S+LFPSS RRF E Sbjct: 434 VQPITPSLDKLWDDHNGSKKDNPFDKKPLSMLFPSSSRRFSSIE 477