BLASTX nr result

ID: Coptis21_contig00016029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016029
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263...   204   9e-51
ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265...   202   3e-50
emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]   201   1e-49
ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_002512452.1| conserved hypothetical protein [Ricinus comm...   188   7e-46

>ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263080 [Vitis vinifera]
           gi|296089728|emb|CBI39547.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  204 bits (519), Expect = 9e-51
 Identities = 101/155 (65%), Positives = 121/155 (78%)
 Frame = -3

Query: 558 LIVITLFLTPSNSSVTTNAETAYELLQSYNFPVGLLPKGVVSYTLENTTGKFSVTLNGSC 379
           L +I +  TP++SS   ++ T YE+LQ YNFPVGLLPKGV+ Y L  +TGKFS + NGSC
Sbjct: 16  LCLILIHSTPASSS--NDSPTVYEVLQDYNFPVGLLPKGVIGYDLNTSTGKFSASFNGSC 73

Query: 378 SFALEDSSYQLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVGIA 199
           SF+LE  SYQLKYKSTIKG I K KL  L+GVSVK+F  WV+I+EV RSG+D+DF VGIA
Sbjct: 74  SFSLE-GSYQLKYKSTIKGNISKGKLSSLEGVSVKLFFIWVDIIEVRRSGDDIDFSVGIA 132

Query: 198 SATFPIGNFEECPQCGCGLDCVNDQVRKFRTHPFV 94
           SA F I NFEECPQCGCGL+C N QV K R++PFV
Sbjct: 133 SAGFSIDNFEECPQCGCGLNCGNRQVNKLRSNPFV 167


>ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]
          Length = 162

 Score =  202 bits (514), Expect = 3e-50
 Identities = 98/158 (62%), Positives = 122/158 (77%)
 Frame = -3

Query: 567 PSLLIVITLFLTPSNSSVTTNAETAYELLQSYNFPVGLLPKGVVSYTLENTTGKFSVTLN 388
           P++L++  +FL+ S  +   ++ TAYE+LQSYNFP+GLLPKG + Y L+  TGKF+   N
Sbjct: 4   PAVLVLCVIFLS-SIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFN 62

Query: 387 GSCSFALEDSSYQLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWV 208
           GSC F+LE  SYQLKYKSTI G I +NKL  L G+SVKV   W+NIVEV R+G+D++F V
Sbjct: 63  GSCGFSLE-GSYQLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEFSV 121

Query: 207 GIASATFPIGNFEECPQCGCGLDCVNDQVRKFRTHPFV 94
           GIASA FPI NF ECPQCGCGLDCVN QVRK +T+PFV
Sbjct: 122 GIASAAFPIDNFFECPQCGCGLDCVNGQVRKLKTNPFV 159


>emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]
          Length = 162

 Score =  201 bits (510), Expect = 1e-49
 Identities = 98/158 (62%), Positives = 121/158 (76%)
 Frame = -3

Query: 567 PSLLIVITLFLTPSNSSVTTNAETAYELLQSYNFPVGLLPKGVVSYTLENTTGKFSVTLN 388
           P++L++  +FL+ S  +   ++ TAYE+LQSYNFP+GLLPKG + Y L+  TGKF+   N
Sbjct: 4   PAVLVLCVIFLS-SIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFN 62

Query: 387 GSCSFALEDSSYQLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWV 208
           GSC F+LE  SYQLKYKSTI G I +NKL  L G SVKV   W+NIVEV R+G+D++F V
Sbjct: 63  GSCGFSLE-GSYQLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEFSV 121

Query: 207 GIASATFPIGNFEECPQCGCGLDCVNDQVRKFRTHPFV 94
           GIASA FPI NF ECPQCGCGLDCVN QVRK +T+PFV
Sbjct: 122 GIASAAFPIDNFFECPQCGCGLDCVNGQVRKLKTNPFV 159


>ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|222861109|gb|EEE98651.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  191 bits (484), Expect = 1e-46
 Identities = 91/158 (57%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
 Frame = -3

Query: 564 SLLIVITLFLTPSNSSVTTNAETAYELLQSYNFPVGLLPKGVVSYTLENTTGKFSVTLNG 385
           +L ++++  +T S+ ++T N  T YE++  YNFP+G+LPKG   Y L+ TTG+F   LNG
Sbjct: 8   TLFLILSPLVTSSSLTITDNLPTVYEIIAGYNFPIGILPKGATGYKLDKTTGEFGAFLNG 67

Query: 384 SCSFALEDSSYQLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDLDFWVG 205
           SCSF++E  SYQL YKSTI G I  N+LK L GVSVKV  FW+NIVEV R+G++LDF VG
Sbjct: 68  SCSFSVE-GSYQLNYKSTISGYISDNRLKSLSGVSVKVLFFWLNIVEVIRNGDELDFSVG 126

Query: 204 IASATFPIGNFEECPQCGCGLDCVN-DQVRKFRTHPFV 94
           IASA+FPI NF ECPQCGCGL+C N +   K R++PFV
Sbjct: 127 IASASFPIDNFYECPQCGCGLNCNNVELATKLRSNPFV 164


>ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis]
           gi|255591191|ref|XP_002535460.1| conserved hypothetical
           protein [Ricinus communis] gi|223523035|gb|EEF26923.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223548413|gb|EEF49904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  188 bits (477), Expect = 7e-46
 Identities = 98/163 (60%), Positives = 120/163 (73%), Gaps = 2/163 (1%)
 Frame = -3

Query: 576 FRSPSLLIVITLFLTPSNSSVTTNAE-TAYELLQSYNFPVGLLPKGVVSYTLENTTGKFS 400
           + S S ++ I L  + S  + + N E TAYE+L  YNFP GLLPKGV+ Y L+ T+GKFS
Sbjct: 9   YSSLSAILCIVLLFSSSWLAKSVNEEPTAYEILSDYNFPKGLLPKGVIGYDLDTTSGKFS 68

Query: 399 VTLNGSCSFALEDSSYQLKYKSTIKGTIMKNKLKDLQGVSVKVFLFWVNIVEVDRSGEDL 220
             LNG+CSF+LE  SYQL+YKSTI+G I K KL  LQGVSVK+   WV+IVEV RSG+DL
Sbjct: 69  AFLNGTCSFSLE-GSYQLRYKSTIRGHISKGKLSSLQGVSVKLLFMWVDIVEVSRSGDDL 127

Query: 219 DFWVGIASATFPIGNFEECPQCGCGLDCVN-DQVRKFRTHPFV 94
           +F VGIA A FPI NFEE PQCGCGLDC +  +V K R++PFV
Sbjct: 128 EFSVGIAGAGFPIDNFEESPQCGCGLDCGDRRKVSKMRSNPFV 170


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