BLASTX nr result

ID: Coptis21_contig00016023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016023
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis...    57   2e-06
emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]    55   8e-06

>ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
           gi|297735488|emb|CBI17928.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/51 (60%), Positives = 34/51 (66%)
 Frame = +2

Query: 221 MASNPSEGGLTDDFLDQILSIPSYSVNDTNLAGNDGTTSASMVLQLSSSTG 373
           MASNPSE    DDFL+QIL IP+Y   D NLA ND   +A MVLQL S  G
Sbjct: 1   MASNPSEAP-ADDFLEQILGIPTYPAADPNLAANDVNLAAPMVLQLGSGEG 50


>emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
          Length = 337

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = +2

Query: 221 MASNPSEGGLTDDFLDQILSIPSYSVNDTNLAGNDGTTSASMVLQLSSSTG 373
           MA+NP+EG  TDDFL+QIL+IPSY  +D N+ G    T ++MVLQLSS  G
Sbjct: 1   MATNPAEG-YTDDFLEQILAIPSYPGHDPNMVG----TGSTMVLQLSSGDG 46


Top