BLASTX nr result

ID: Coptis21_contig00016014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016014
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27354.3| unnamed protein product [Vitis vinifera]              180   3e-43
ref|XP_002268353.1| PREDICTED: uncharacterized aarF domain-conta...   180   3e-43
ref|XP_002528516.1| Ubiquinone biosynthesis protein coq-8, putat...   174   1e-41
ref|XP_002888468.1| ABC1 family protein [Arabidopsis lyrata subs...   160   3e-37
ref|NP_176770.2| aarF domain-containing kinase [Arabidopsis thal...   158   9e-37

>emb|CBI27354.3| unnamed protein product [Vitis vinifera]
          Length = 623

 Score =  180 bits (456), Expect = 3e-43
 Identities = 88/114 (77%), Positives = 101/114 (88%)
 Frame = -3

Query: 706 SKKIEILGERFGVGRYSRYFPVIFTGRTIDSKSALGRGMSDEEKKNLKMEVKSLKMEDIS 527
           S KI+ LG++FGVG+YSRYFP+IFTGRTIDSKSALG+GMS+EEKK LK E+K LKMEDIS
Sbjct: 443 SNKIQYLGDQFGVGKYSRYFPLIFTGRTIDSKSALGKGMSNEEKKKLKQELKFLKMEDIS 502

Query: 526 SFMESLPPDFLTILRTDGLLRSIISKLGAPQRIRLLAYAKYSVYGLWTKSNPES 365
           SFMESLPPDF+TILR DGLLRS+ SKL APQR+RLL Y KY++YGL  K NPES
Sbjct: 503 SFMESLPPDFVTILRADGLLRSLCSKLSAPQRVRLLVYGKYALYGLPPKLNPES 556


>ref|XP_002268353.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           1-like [Vitis vinifera]
          Length = 561

 Score =  180 bits (456), Expect = 3e-43
 Identities = 88/114 (77%), Positives = 101/114 (88%)
 Frame = -3

Query: 706 SKKIEILGERFGVGRYSRYFPVIFTGRTIDSKSALGRGMSDEEKKNLKMEVKSLKMEDIS 527
           S KI+ LG++FGVG+YSRYFP+IFTGRTIDSKSALG+GMS+EEKK LK E+K LKMEDIS
Sbjct: 381 SNKIQYLGDQFGVGKYSRYFPLIFTGRTIDSKSALGKGMSNEEKKKLKQELKFLKMEDIS 440

Query: 526 SFMESLPPDFLTILRTDGLLRSIISKLGAPQRIRLLAYAKYSVYGLWTKSNPES 365
           SFMESLPPDF+TILR DGLLRS+ SKL APQR+RLL Y KY++YGL  K NPES
Sbjct: 441 SFMESLPPDFVTILRADGLLRSLCSKLSAPQRVRLLVYGKYALYGLPPKLNPES 494


>ref|XP_002528516.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223532076|gb|EEF33885.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 548

 Score =  174 bits (442), Expect = 1e-41
 Identities = 89/114 (78%), Positives = 99/114 (86%)
 Frame = -3

Query: 706 SKKIEILGERFGVGRYSRYFPVIFTGRTIDSKSALGRGMSDEEKKNLKMEVKSLKMEDIS 527
           S +IE LGERF VG+YSRYFPVIFTGRTI SKSALG+GM  EEKK LK ++KSL MEDIS
Sbjct: 381 SHQIEQLGERFNVGKYSRYFPVIFTGRTIHSKSALGKGMLAEEKKVLKQDLKSLTMEDIS 440

Query: 526 SFMESLPPDFLTILRTDGLLRSIISKLGAPQRIRLLAYAKYSVYGLWTKSNPES 365
           SFMESLPPDFLTILRTDGLLRS++SKLGA QR+RLL YAKY+VYGL    NP+S
Sbjct: 441 SFMESLPPDFLTILRTDGLLRSVLSKLGASQRVRLLTYAKYAVYGLPRMLNPDS 494


>ref|XP_002888468.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334309|gb|EFH64727.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  160 bits (404), Expect = 3e-37
 Identities = 76/113 (67%), Positives = 97/113 (85%)
 Frame = -3

Query: 706 SKKIEILGERFGVGRYSRYFPVIFTGRTIDSKSALGRGMSDEEKKNLKMEVKSLKMEDIS 527
           S KI+ LG++FGVG+Y+++FPVIFTGRT DSKS LG+GMS +E++ LK E+K L++ED++
Sbjct: 375 SNKIQELGKQFGVGKYAKFFPVIFTGRTSDSKSGLGKGMSIQERQKLKQELKLLRLEDVT 434

Query: 526 SFMESLPPDFLTILRTDGLLRSIISKLGAPQRIRLLAYAKYSVYGLWTKSNPE 368
           +FM SLPPDFLT+LRTDGL+RSI  KLGAPQR+RLLAYAKY+VYGL  K   E
Sbjct: 435 TFMGSLPPDFLTVLRTDGLIRSITLKLGAPQRVRLLAYAKYAVYGLGYKPTSE 487


>ref|NP_176770.2| aarF domain-containing kinase [Arabidopsis thaliana]
           gi|332196322|gb|AEE34443.1| aarF domain-containing
           kinase [Arabidopsis thaliana]
          Length = 551

 Score =  158 bits (400), Expect = 9e-37
 Identities = 75/113 (66%), Positives = 97/113 (85%)
 Frame = -3

Query: 706 SKKIEILGERFGVGRYSRYFPVIFTGRTIDSKSALGRGMSDEEKKNLKMEVKSLKMEDIS 527
           S KI+ LG++FGVG+Y+++FPVIFTGRT +SKS LG+GMS +E++ LK E+K L++ED++
Sbjct: 376 SNKIQELGKQFGVGKYAKFFPVIFTGRTSESKSGLGKGMSIQERQKLKQELKLLRLEDVT 435

Query: 526 SFMESLPPDFLTILRTDGLLRSIISKLGAPQRIRLLAYAKYSVYGLWTKSNPE 368
           +FM SLPPDFLT+LRTDGL+RSI  KLGAPQR+RLLAYAKY+VYGL  K   E
Sbjct: 436 TFMGSLPPDFLTVLRTDGLIRSITLKLGAPQRVRLLAYAKYAVYGLGYKPTSE 488


Top