BLASTX nr result
ID: Coptis21_contig00016001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016001
(1861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 162 3e-37
ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2... 153 2e-34
ref|XP_003571272.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 149 2e-33
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 149 3e-33
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 149 3e-33
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 162 bits (410), Expect = 3e-37
Identities = 132/537 (24%), Positives = 237/537 (44%), Gaps = 26/537 (4%)
Frame = -3
Query: 1691 ETLMKNFLWTGNPCVSKKTTVAWDKCCKPIEEGGLGFRRLKEMNLALLMKLAWHVLTAED 1512
+T +NF W +P + W+K C+P GG+GFR+ + N+AL MKL W ++ ++D
Sbjct: 835 DTTYRNFFWNKDPAAKSANFIGWNKICQPKSVGGVGFRKAEVTNIALQMKLLWKIMVSKD 894
Query: 1511 HFAKYMRNKYFTRDGGMITYYVKSSI---WTGIKWALEELQSRTQWVIGNGSKIDVWRDN 1341
+ + + + ++ ++ + S+ W + +W+IG+G I W DN
Sbjct: 895 NIWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFSKGLRWLIGDGQDISFWTDN 954
Query: 1340 WLGNFSI-KQALNLTDSELKGYRARVNTLIHNGNWALPIQLQQLLSNAGISWQNLQDLDT 1164
W+ + + + + SE N L G W +P L + N + ++ +
Sbjct: 955 WIFQYPLNSKYVPTVGSENIKVAECFNGL---GGWDIPKLLTLVPPNIVKAISSVFIPSS 1011
Query: 1163 NKQDNMVWTPNHCGKFSVHSA---FEEIRRKRPKPCWVSMVWRSYVPVKTAAIAWKLCNN 993
++QD ++W G++SV S E+ + + +W + P K WK CN+
Sbjct: 1012 SQQDRLLWGLTPTGQYSVKSGASLIREVNGGTIEKVEFNWIWGIHAPPKIKNFLWKACND 1071
Query: 992 CATTDESLMNKGLKLVSRCYMCGEEEETLKHLFWGCSFTRTVWNWISEQFGF-------- 837
T L + + C C ET+ HL + C FT +++ + ++F +
Sbjct: 1072 GLATTSRLERSHIFVPQNCCFCDCPSETICHLCFQCPFTLDIYSHLEDKFQWPAYPSWFS 1131
Query: 836 ---RNNFQSLNEAKRCAGGSSSMIKRLWAVALIGGMVTIWKQRNKVFFEDKKPSFIHCTK 666
++F+S+ EA + ++ L ++++ V W RNK+ F ++ SF +
Sbjct: 1132 TLQLSSFRSVLEACHI----NLTLEYLTKLSIVWWHV--WYFRNKLIFNNESTSFSQASF 1185
Query: 665 EITRLVRQAHLLDPGSMYKSTIDVRTLLNWNLEARLHRAPRIRK-CWWSLPIPDMIKINC 489
I + G K+ +++ + N L R K WS P D++K+N
Sbjct: 1186 IIHSFM--------GKWEKANLEIPS-FNTPLPKDCKLPVRSGKNLIWSPPNEDVLKVNF 1236
Query: 488 DGSSKGNPGVAGLGATCRNHTGDFLLVIWRKIGVNTNYL-AECLAIVESAEVAVQ-RNW- 318
DGS N G A G RN G+ L+ + +GV + L AE + ++E + A+ +NW
Sbjct: 1237 DGSKLDN-GQAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQNWS 1295
Query: 317 KKVWFESDSAAAIVAFG-TGNMPWSLKN---RWHKCKNFFSQCILSSTWREANFSAD 159
+K+ FE D+ A I A + PW++ N F + +REAN AD
Sbjct: 1296 RKIIFEGDNIAVINAMSPSATGPWTIANIILDAGALLGHFQEVKFQHCYREANRLAD 1352
>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
predicted protein [Populus trichocarpa]
Length = 670
Score = 153 bits (386), Expect = 2e-34
Identities = 144/566 (25%), Positives = 239/566 (42%), Gaps = 43/566 (7%)
Frame = -3
Query: 1691 ETLMKNFLWTGNPCVSKKTTVAWDKCCKPIEEGGLGFRRLKEMNLALLMKLAWHVLTAED 1512
E ++FLW+G V W P +GGLG L++ N AL+ K W + E
Sbjct: 110 EKKFRSFLWSGKEGGKNICNVRWSIISLPKNDGGLGIGSLRDKNKALMFKWLWRFGSKES 169
Query: 1511 HFAK-YMRNKYFTRDGGMITYYVKSSIWTGIKWA-----------LEEL-QSRTQWVIGN 1371
K + N Y T+ +I Y + TG W+ L+++ + ++ ++GN
Sbjct: 170 SMWKDVINNIYNTKCSSIILKYPIAG--TGSTWSRIVNHCVTDIRLQDIVKHQSVMLVGN 227
Query: 1370 GSKIDVWRDNWLGNFSIKQALNLTDSELKGYRARVNTL-IHNGN-------WALPIQLQQ 1215
G +I W D+W S+ A ++ + I +G+ W+ P++ +
Sbjct: 228 GKRIKFWLDDWTATGSLADQFPALFRLTNDKEASLDKMGIWDGHAWHWLFTWSRPLRGRN 287
Query: 1214 --LLSNAGISWQNLQDLDTNKQDNMVWTPNHCGKFSVHSAFEEIRRKRPKPCWVSM--VW 1047
LL +Q LD + +D ++W N G+FS+ S + K P S +W
Sbjct: 288 YGLLDRMTAILSKVQ-LDKDAEDRLIWKANSTGRFSIKSLCGLLSPKPPMDTSFSFTGIW 346
Query: 1046 RSYVPVKTAAIAWKLCNNCATTDESLMNKGLKLVSR--CYMCGEEEETLKHLFWGCSFTR 873
R VP K W T L+ +G+ +S C +C EEE++ H+ C
Sbjct: 347 RGIVPPKVEVFCWMAIIKKINTRSMLVRRGILDISAAACPICLAEEESVDHILLHCHKHW 406
Query: 872 TVWNWISEQFGF-----RNNFQSLNEAKRCAGGSSSMIKRLWAVALIGGMVTIWKQRNKV 708
VW+ I +G +N ++ G K+ W + L ++W RN V
Sbjct: 407 IVWSKIINWWGLAWCCPKNLAALFSQWDSLVYGKFQ--KKAWLMLLFSVAWSLWLHRNDV 464
Query: 707 FFEDKKPSFIHC-TKEITRLVRQAHLLDPGSMYKSTIDVRT---LLNWNLEARLHRAPRI 540
F+ P++ ITRL ++P Y ++ +R+ LL W ++ R +
Sbjct: 465 IFKQSTPNYDTLFILIITRLCFWIKAIEPDFSYSASDLLRSAEGLLRWT-NSKNQRVVVV 523
Query: 539 RKCWWSLPIPDMIKINCDGSSKGNPGVAGLGATCRNHTGDFLLVIWRKIGVNTNYLAECL 360
WS + + K N DGSS G G +G+G RNH G L + +G+ + +AE
Sbjct: 524 ----WSPLMLNSFKWNVDGSSLGKSGPSGIGGVLRNHNGIILGIFSLSVGILDSNVAELK 579
Query: 359 AIVESAEVAV---QRNWKKVWFESDSAAAIVAFGT-GNMPWSLKNRW---HKCKNFFSQC 201
A+V++ E++ + + K + ESDSA I + N PW N + + + F
Sbjct: 580 AVVKAIELSAFNCRLHHKHIIIESDSANVISWMNSPHNRPWRHHNLFSSIQRAASCFGSL 639
Query: 200 ILSSTWREANFSADQAAKYATDMITE 123
+ + RE+N AD AK TE
Sbjct: 640 TFTHSLRESNHMADHMAKQGVFRNTE 665
>ref|XP_003571272.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Brachypodium distachyon]
Length = 593
Score = 149 bits (376), Expect = 2e-33
Identities = 127/513 (24%), Positives = 219/513 (42%), Gaps = 32/513 (6%)
Frame = -3
Query: 1685 LMKNFLWTGNPCVSKKTTVAWDKCCKPIEEGGLGFRRLKEMNLALLMKLAWHVLTAEDHF 1506
++++F W K VAWD +P GGL FR ++ N ALL + W ++ D
Sbjct: 39 IIRDFWWGAEHGRRKTHWVAWDVMLRPKNMGGLDFRDMQTFNQALLARQVWRLIDKPDSL 98
Query: 1505 -AKYMRNKYFTRDGGMITYYV--KSSIW-TGIKWALEELQSRTQWVIGNGSKIDVWRDNW 1338
A+ +R KY+ + T + SS W I++ LE +++ W IG G + +WRD W
Sbjct: 99 CARLLRAKYYPNGSLVDTVFTGNASSSWQAAIEFGLELVKNGIIWRIGCGXGVRIWRDPW 158
Query: 1337 LGNFSIKQALNLTDSELKGYRARVNTLIHNGN-------WALPIQLQQLLSNAGISWQNL 1179
+ +Q ++ + L + + + T N N + LPI ++ +L W
Sbjct: 159 IPRDFSRQPISPRRNCLLKWVSELLTPDDNWNMELLMNYFFLPIDIEYILKIRASGW--- 215
Query: 1178 QDLDTNKQDNMVWTPNHCGKFSVHSAF----------EEIRRKRPKPCWVSMVWRSY--- 1038
N+QD + W P+ G+FS+ SA+ + + +P S W+S
Sbjct: 216 -----NEQDILAWHPDKRGQFSMRSAYHLGRCISPEGQNVGATSSRPDGSSSKWKSVXND 270
Query: 1037 -VPVKTAAIAWKLCNNCATTDESLMNKGLKLVSRCYMCGEEEETLKHLFWGCSFTRTVWN 861
V K AWKL + T +L + ++ C +CG E+E H C R +W
Sbjct: 271 IVRRKVNIFAWKLIRDALATQVNLCERKMEKTRICQVCGAEDEDSFHTMVRCPNARGIWQ 330
Query: 860 WISEQFGFRNNFQSLNEAKRCAGGSSSMIKRLWAVALIGGMVTIWKQRNKVFFEDKKPSF 681
+ + + + N + +++ A L+ IW +N + DK P+
Sbjct: 331 AMRPHWDLPDPRRLQNTGSGWLLHAILPMEKTKAAMLLMMFWRIWHVQNDIT-HDKIPAP 389
Query: 680 IHCTKEITRLVRQAHLLDPGSMYKSTIDVRTLLNWNLEARLHRA---PRIRKCWWSLPIP 510
+ ++ + LLD + + + +++ ++L++ PR + W P P
Sbjct: 390 VEASRHFLCSYMGSLLLDKQYPCVDAVKGKQVCSYSARSKLNQRNHQPRAAQARWKPPDP 449
Query: 509 DMIKINCDGSSKGNPGVAGLGATCRNHTGDFLLVIWRKIGVNTNYL-AECLAIVESAEVA 333
D +K+N DGS + G AG+G RN G+ L R + + L AE A + A
Sbjct: 450 DSVKLNVDGSFSPDDGSAGIGLVLRNQKGEVLFSACRSLTRCFDALDAELTACEDGLRAA 509
Query: 332 VQRNWKKVWFESDSA---AAIVAFGTGNMPWSL 243
+ K + ESD A A + A G P++L
Sbjct: 510 IGWTDKIIVLESDCAKALAMVAAKGLDRSPFAL 542
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 149 bits (375), Expect = 3e-33
Identities = 125/486 (25%), Positives = 206/486 (42%), Gaps = 19/486 (3%)
Frame = -3
Query: 1679 KNFLWTGNPCVSKKTTVAWDKCCKPIEEGGLGFRRLKEMNLALLMKLAWHVLTAEDH-FA 1503
+NFLW + K +V W + CKP EGGLG R ++ N A L K+AW + + D +
Sbjct: 1359 RNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWV 1418
Query: 1502 KYMRNKYFTRDGGMITYYVKSSI---WTGIKWALEELQSRTQWVIGNGSKIDVWRDNWLG 1332
K +R KY ++ + +S+ W I + L +W +GNG KI+ W D W+G
Sbjct: 1419 KVLREKY-VKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVG 1477
Query: 1331 ------NFSIKQALNLTD---SELKGYRARVNT-LIHNGNWALPIQLQQLLSNAGISWQN 1182
N ++TD +L + R +T +HN LPI + ++ I+
Sbjct: 1478 DGPLASNTDCINQPHMTDIKVEDLTTSQRRWDTGALHN---ILPINMIDMVRATPIA--- 1531
Query: 1181 LQDLDTNKQDNMVWTPNHCGKFSVHSAFEEIRRKRPKPCWVSMVWRSYVPVKTAAIAWKL 1002
+++ ++D W + G +V SA+ I +WR+ K WK+
Sbjct: 1532 ---INSEQEDFPSWPHSTTGMVTVSSAYSLIAGHDGDGRSHDWIWRATCTEKIKLFMWKI 1588
Query: 1001 CNNCATTDESLMNKGLKLVSRCYMCGEEEETLKHLFWGCSFTRTVWNWISEQFGFR--NN 828
N + +GL + C +CGEE+ETL HLF C W+ F+ N+
Sbjct: 1589 VKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNH 1648
Query: 827 FQSLNEAK-RCAGGSSSMIKRLWAVALIGGMVTIWKQRNKVFFEDKKPSFIHCTKEITRL 651
+ K C+ W++ + +WK RN++ F++ +
Sbjct: 1649 LHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVFDN-------------NI 1695
Query: 650 VRQAHLLDPGSMYKSTIDVRTLLNWNLEARLHRAPRIRKCW--WSLPIPDMIKINCDGSS 477
+ +L+ M S + R LL A+ + W WS P K+N DG+
Sbjct: 1696 TAPSDILNRSFMESS--EARCLL-----AKRTGLQTAFQTWVVWSPPAAGFTKLNSDGAC 1748
Query: 476 KGNPGVAGLGATCRNHTGDFLLVIWRKIGVNTNYLAECLAIVESAEVAVQRNWKKVWFES 297
K + +A G RN G ++ IG ++LAE + E +A R + K+ E+
Sbjct: 1749 KSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAET 1808
Query: 296 DSAAAI 279
DS A +
Sbjct: 1809 DSEAVV 1814
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 149 bits (375), Expect = 3e-33
Identities = 122/486 (25%), Positives = 204/486 (41%), Gaps = 19/486 (3%)
Frame = -3
Query: 1679 KNFLWTGNPCVSKKTTVAWDKCCKPIEEGGLGFRRLKEMNLALLMKLAWHVLTAEDH-FA 1503
+NFLW + K +V W + CKP EGGLG R ++ N A L K+AW + + D +
Sbjct: 827 RNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWV 886
Query: 1502 KYMRNKYFTRDGGMITYYVKSSI---WTGIKWALEELQSRTQWVIGNGSKIDVWRDNWLG 1332
K +R KY ++ + +S+ W I + L +W +GNG KI+ W D W+G
Sbjct: 887 KVLREKY-VKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVG 945
Query: 1331 ------NFSIKQALNLTDSELK----GYRARVNTLIHNGNWALPIQLQQLLSNAGISWQN 1182
N ++TD +++ R +HN LP + ++ I+
Sbjct: 946 DGPLASNTDCINQPHMTDIKVEDLITSQRRWDTGALHN---ILPTNMIDMVRATPIA--- 999
Query: 1181 LQDLDTNKQDNMVWTPNHCGKFSVHSAFEEIRRKRPKPCWVSMVWRSYVPVKTAAIAWKL 1002
+++ ++D + W + G +V SA+ I +WR+ K WK+
Sbjct: 1000 ---INSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWIWRATCTEKIKLFMWKI 1056
Query: 1001 CNNCATTDESLMNKGLKLVSRCYMCGEEEETLKHLFWGCSFTRTVWNWISEQFGFR--NN 828
N + +GL + C +CGEE+ETL HLF C W+ F+ N+
Sbjct: 1057 VKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNH 1116
Query: 827 FQSLNEAK-RCAGGSSSMIKRLWAVALIGGMVTIWKQRNKVFFEDKKPSFIHCTKEITRL 651
+ K C+ W++ + +WK RN++ F++ +
Sbjct: 1117 LHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNRLVFDN-------------NI 1163
Query: 650 VRQAHLLDPGSMYKSTIDVRTLLNWNLEARLHRAPRIRKCW--WSLPIPDMIKINCDGSS 477
+ +L+ M S + R LL A+ + W WS P K+N DG+
Sbjct: 1164 TAPSDILNRSFMESS--EARCLL-----AKRTGLQTAFQTWVVWSPPAAGFTKLNSDGAC 1216
Query: 476 KGNPGVAGLGATCRNHTGDFLLVIWRKIGVNTNYLAECLAIVESAEVAVQRNWKKVWFES 297
K + +A G RN G ++ IG ++LAE + E +A R + K+ E+
Sbjct: 1217 KSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAET 1276
Query: 296 DSAAAI 279
DS A +
Sbjct: 1277 DSEAVV 1282