BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015803
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   116   4e-24
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   115   1e-23
ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   106   5e-21
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   106   5e-21

>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223544485|gb|EEF46004.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  116 bits (291), Expect = 4e-24
 Identities = 50/73 (68%), Positives = 55/73 (75%)
 Frame = +1

Query: 529 LQLYKERVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPSFEGIDTLFGNXXXXXXXXXX 708
           ++LYKE  CPLDNFELLIFSMAGPEGK+FPLCPYCYNNP FEG+DTLFG           
Sbjct: 651 IKLYKELTCPLDNFELLIFSMAGPEGKTFPLCPYCYNNPPFEGVDTLFGASKNGNFGKLG 710

Query: 709 XXXXMPCFMCPHP 747
               MPCF+CPHP
Sbjct: 711 KGAGMPCFLCPHP 723


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  115 bits (287), Expect = 1e-23
 Identities = 50/73 (68%), Positives = 55/73 (75%)
 Frame = +1

Query: 529 LQLYKERVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPSFEGIDTLFGNXXXXXXXXXX 708
           ++LYKE  CPLDNFELLIFS+AGPEGKSFPLCPYCYN+P FEGIDTLFG           
Sbjct: 679 IKLYKELTCPLDNFELLIFSLAGPEGKSFPLCPYCYNSPPFEGIDTLFGATKTSSTGKLG 738

Query: 709 XXXXMPCFMCPHP 747
               MPCF+CPHP
Sbjct: 739 KGAGMPCFLCPHP 751


>ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|222861878|gb|EEE99420.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score =  110 bits (274), Expect = 4e-22
 Identities = 48/73 (65%), Positives = 53/73 (72%)
 Frame = +1

Query: 529 LQLYKERVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPSFEGIDTLFGNXXXXXXXXXX 708
           ++LYKE  CPLDNFELLIF+MAGPEGKSFPLCP CYN+P FEGID LFG           
Sbjct: 624 IKLYKELTCPLDNFELLIFAMAGPEGKSFPLCPLCYNSPPFEGIDALFGASKTGSSGMLG 683

Query: 709 XXXXMPCFMCPHP 747
               MPCF+CPHP
Sbjct: 684 KGAGMPCFLCPHP 696


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score =  106 bits (265), Expect = 5e-21
 Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
 Frame = +1

Query: 529 LQLYKERVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPSFEGIDTLFG-NXXXXXXXXX 705
           ++LYKE  CPLDNFELLI+S+ GPEGKSFPLCPYCYN+P FEGI+TL+G +         
Sbjct: 648 IKLYKELTCPLDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTS 707

Query: 706 XXXXXMPCFMCPHP 747
                MPCFMCPHP
Sbjct: 708 SKGMGMPCFMCPHP 721


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score =  106 bits (265), Expect = 5e-21
 Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
 Frame = +1

Query: 529 LQLYKERVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPSFEGIDTLFG-NXXXXXXXXX 705
           ++LYKE  CPLDNFELLI+S+ GPEGKSFPLCPYCYN+P FEGI+TL+G +         
Sbjct: 651 IKLYKELTCPLDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTS 710

Query: 706 XXXXXMPCFMCPHP 747
                MPCFMCPHP
Sbjct: 711 SKGMGMPCFMCPHP 724