BLASTX nr result

ID: Coptis21_contig00015594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015594
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    82   1e-13
emb|CBI32154.3| unnamed protein product [Vitis vinifera]               82   1e-13
emb|CBI29971.3| unnamed protein product [Vitis vinifera]               78   3e-12
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    78   3e-12
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   4e-12

>ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 617

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = +1

Query: 1   YIFLAVGKIGSSTNLIVQRVEYVQE*DQRSHLIDLFHAQRENGSHGK 141
           YIFLAVG++GSST+LIVQRVE+VQE D+RSHL+DL HAQRENG+HGK
Sbjct: 366 YIFLAVGRVGSSTDLIVQRVEFVQESDKRSHLMDLLHAQRENGTHGK 412



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 320 VETKKGADSLEYWLCSNGFPATTIYGDRSQQE 415
           VETKKGAD+LE+WLC NGFPAT+I+GDRSQQE
Sbjct: 420 VETKKGADALEHWLCINGFPATSIHGDRSQQE 451


>emb|CBI32154.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = +1

Query: 1   YIFLAVGKIGSSTNLIVQRVEYVQE*DQRSHLIDLFHAQRENGSHGK 141
           YIFLAVG++GSST+LIVQRVE+VQE D+RSHL+DL HAQRENG+HGK
Sbjct: 150 YIFLAVGRVGSSTDLIVQRVEFVQESDKRSHLMDLLHAQRENGTHGK 196



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 320 VETKKGADSLEYWLCSNGFPATTIYGDRSQQE 415
           VETKKGAD+LE+WLC NGFPAT+I+GDRSQQE
Sbjct: 204 VETKKGADALEHWLCINGFPATSIHGDRSQQE 235


>emb|CBI29971.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 36/47 (76%), Positives = 43/47 (91%)
 Frame = +1

Query: 1   YIFLAVGKIGSSTNLIVQRVEYVQE*DQRSHLIDLFHAQRENGSHGK 141
           YIFLAVG++GSST+LIVQRVE+V E D+RSHL+DL HAQR NG+HGK
Sbjct: 150 YIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGK 196



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 320 VETKKGADSLEYWLCSNGFPATTIYGDRSQQE 415
           VETKKGADSLE+WLC NGFPATTI+GDR+QQE
Sbjct: 204 VETKKGADSLEHWLCMNGFPATTIHGDRTQQE 235


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 36/47 (76%), Positives = 43/47 (91%)
 Frame = +1

Query: 1   YIFLAVGKIGSSTNLIVQRVEYVQE*DQRSHLIDLFHAQRENGSHGK 141
           YIFLAVG++GSST+LIVQRVE+V E D+RSHL+DL HAQR NG+HGK
Sbjct: 375 YIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGK 421



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 320 VETKKGADSLEYWLCSNGFPATTIYGDRSQQE 415
           VETKKGADSLE+WLC NGFPATTI+GDR+QQE
Sbjct: 429 VETKKGADSLEHWLCMNGFPATTIHGDRTQQE 460


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   YIFLAVGKIGSSTNLIVQRVEYVQE*DQRSHLIDLFHAQRENGSHGK 141
           YIFLAVG++GSST+LIVQRVEYVQE D+RSHL+DL HAQR NG  GK
Sbjct: 372 YIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGK 418



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +2

Query: 320 VETKKGADSLEYWLCSNGFPATTIYGDRSQQE 415
           VETKKGADSLE+WLC NGFPATTI+GDRSQQE
Sbjct: 426 VETKKGADSLEHWLCLNGFPATTIHGDRSQQE 457


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