BLASTX nr result

ID: Coptis21_contig00015577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015577
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275399.1| PREDICTED: microfibrillar-associated protein...   111   7e-23
ref|XP_002325861.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
emb|CAN78798.1| hypothetical protein VITISV_035471 [Vitis vinifera]   110   2e-22
ref|XP_004167656.1| PREDICTED: microfibrillar-associated protein...   107   1e-21
ref|XP_002319725.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_002275399.1| PREDICTED: microfibrillar-associated protein 1-like [Vitis
           vinifera]
          Length = 436

 Score =  111 bits (277), Expect = 7e-23
 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 12/111 (10%)
 Frame = +3

Query: 6   VEEEGEV-RTSNTAVALEKVFP-RNEDGGQV---DPRLRRLRESRVDNKDEIRANHRRIR 170
           V+E+  +  TS  ++ALEK FP R ED G V   DPRLRRL ESR+DN+DE+RA+HRRIR
Sbjct: 42  VDEDAHIGTTSGASIALEKAFPSREEDVGIVKKDDPRLRRLAESRIDNRDEVRADHRRIR 101

Query: 171 QAEFVSTTEEENER-------KDVEEALEERRQSIKEKLLQREHEETQLLP 302
           QAE VST EEEN+R       ++ E+ALEERR+ I+E+LL+++ EE  LLP
Sbjct: 102 QAEIVSTIEEENKRQEGLDLEEEDEDALEERRRRIRERLLRQQQEEAALLP 152


>ref|XP_002325861.1| predicted protein [Populus trichocarpa] gi|222862736|gb|EEF00243.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 11/109 (10%)
 Frame = +3

Query: 9   EEEGEVRTSNTAVALEKVFPRNEDGGQV----DPRLRRLRESRVDNKDEIRANHRRIRQA 176
           EE+G++R +  A +LEK FP  +D   V    DPRLRRL E+R+DN+DE+RA+HRRIRQA
Sbjct: 43  EEDGDIRMARVA-SLEKAFPSRDDSDVVSRKDDPRLRRLAETRIDNRDEMRADHRRIRQA 101

Query: 177 EFVSTTEEENER-------KDVEEALEERRQSIKEKLLQREHEETQLLP 302
           E +ST EEE  +       +D E+ALEERR+ IKEKL QRE EE  LLP
Sbjct: 102 EIISTEEEETRKQEWADMEEDDEDALEERRRRIKEKLRQREREEAALLP 150


>emb|CAN78798.1| hypothetical protein VITISV_035471 [Vitis vinifera]
          Length = 414

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/102 (59%), Positives = 77/102 (75%), Gaps = 11/102 (10%)
 Frame = +3

Query: 30  TSNTAVALEKVFP-RNEDGGQV---DPRLRRLRESRVDNKDEIRANHRRIRQAEFVSTTE 197
           TS  ++ALEK FP R ED G V   DPRLRRL ESR+DN+DE+RA+HRRIRQAE VST E
Sbjct: 51  TSGASIALEKAFPSREEDVGIVKKDDPRLRRLAESRIDNRDEVRADHRRIRQAEIVSTIE 110

Query: 198 EENER-------KDVEEALEERRQSIKEKLLQREHEETQLLP 302
           EEN+R       ++ E+ALEERR+ I+E+LL+++ EE  LLP
Sbjct: 111 EENKRQEGLDLEEEDEDALEERRRRIRERLLRQQQEEAALLP 152


>ref|XP_004167656.1| PREDICTED: microfibrillar-associated protein 1-like [Cucumis
           sativus]
          Length = 433

 Score =  107 bits (267), Expect = 1e-21
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 10/103 (9%)
 Frame = +3

Query: 9   EEEGEVRTSNTAVALEKVFPRNEDGG---QVDPRLRRLRESRVDNKDEIRANHRRIRQAE 179
           +E+G++R +  A ALEK FPR ED     + DPRLRRL ESR+DN++EIRA+HRRIRQAE
Sbjct: 43  DEDGDIRMARAA-ALEKAFPRQEDSDISRKDDPRLRRLAESRIDNREEIRADHRRIRQAE 101

Query: 180 FVSTTEEENER-------KDVEEALEERRQSIKEKLLQREHEE 287
            VST EEE  R       ++ E+ALEERR+ IKEKL QRE EE
Sbjct: 102 IVSTIEEETRRQEGLDAEEEDEDALEERRRRIKEKLRQRELEE 144


>ref|XP_002319725.1| predicted protein [Populus trichocarpa] gi|222858101|gb|EEE95648.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 12/110 (10%)
 Frame = +3

Query: 9   EEEGEVRTSNTAVALEKVFPRNEDGGQV-----DPRLRRLRESRVDNKDEIRANHRRIRQ 173
           +E+G++R +  A AL+K FP  +D   V     DPRLRRL ESR+DN+DE+RA+HRRIRQ
Sbjct: 43  DEDGDIRMARAA-ALDKAFPIRDDSYDVAASKDDPRLRRLAESRIDNRDEVRADHRRIRQ 101

Query: 174 AEFVSTTEEENER-------KDVEEALEERRQSIKEKLLQREHEETQLLP 302
           AE +ST EEE  R       ++ E+ALEERR+ IKEKL  RE EE  LLP
Sbjct: 102 AEIISTEEEEMRRQEWADMEEEDEDALEERRRRIKEKLRHREQEEAVLLP 151


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