BLASTX nr result

ID: Coptis21_contig00015529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015529
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135226.1| PREDICTED: uncharacterized protein LOC101210...    72   9e-11
ref|XP_003613302.1| hypothetical protein MTR_5g035060 [Medicago ...    72   9e-11
ref|XP_002531402.1| N-acetyltransferase, putative [Ricinus commu...    72   1e-10
ref|XP_003517738.1| PREDICTED: uncharacterized protein LOC100817...    71   2e-10
ref|XP_002266260.2| PREDICTED: uncharacterized protein LOC100246...    70   4e-10

>ref|XP_004135226.1| PREDICTED: uncharacterized protein LOC101210740 [Cucumis sativus]
           gi|449478534|ref|XP_004155344.1| PREDICTED:
           uncharacterized LOC101210740 [Cucumis sativus]
          Length = 299

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 567 RRGIGWHHSQIM*GTSI---SNTSTKMYLHCRMIDAAPFNMYNKAGYXXXXXXXXXXXXX 397
           RRGIGWH  +   G  +    +TS ++YLHCRMID APFNMY KAGY             
Sbjct: 211 RRGIGWHLLKA--GEELISQMSTSREVYLHCRMIDNAPFNMYTKAGYSVVQTDTIIILLM 268

Query: 396 LQRRKHLMCKKLPEKSNLEISSFEDTPV 313
           LQRRKHLM KKLP  +    S   D P+
Sbjct: 269 LQRRKHLMRKKLPAMTRSSPSE-SDVPI 295


>ref|XP_003613302.1| hypothetical protein MTR_5g035060 [Medicago truncatula]
           gi|355514637|gb|AES96260.1| hypothetical protein
           MTR_5g035060 [Medicago truncatula]
          Length = 299

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -2

Query: 567 RRGIGWHHSQIM*GT-SISNTSTKMYLHCRMIDAAPFNMYNKAGYXXXXXXXXXXXXXLQ 391
           RRGIGWH  +      S  ++S ++YLHCRMID APFNMY KA Y             LQ
Sbjct: 212 RRGIGWHLLKASEELISRMSSSGEVYLHCRMIDEAPFNMYTKADYKIVTTDSILVLLLLQ 271

Query: 390 RRKHLMCKKLP 358
           RRKHLMCKKLP
Sbjct: 272 RRKHLMCKKLP 282


>ref|XP_002531402.1| N-acetyltransferase, putative [Ricinus communis]
           gi|223528995|gb|EEF30986.1| N-acetyltransferase,
           putative [Ricinus communis]
          Length = 315

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/72 (56%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = -2

Query: 567 RRGIGWHHSQIM*GTSISNTSTK--MYLHCRMIDAAPFNMYNKAGYXXXXXXXXXXXXXL 394
           RRGIGW+  +      IS  S K  +YLHCRMID+APFNMY KAGY             L
Sbjct: 231 RRGIGWNLLKAS-EELISQMSCKGEVYLHCRMIDSAPFNMYIKAGYDVVKTDSILILLML 289

Query: 393 QRRKHLMCKKLP 358
           QRRKHLMCKKLP
Sbjct: 290 QRRKHLMCKKLP 301


>ref|XP_003517738.1| PREDICTED: uncharacterized protein LOC100817255 [Glycine max]
          Length = 291

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -2

Query: 567 RRGIGWHHSQIM*GT-SISNTSTKMYLHCRMIDAAPFNMYNKAGYXXXXXXXXXXXXXLQ 391
           RRGIGWH  +      S  ++S ++YLHCR+ID APFNMY KA Y             LQ
Sbjct: 206 RRGIGWHLLKASEELISQMSSSREVYLHCRIIDEAPFNMYTKADYKIVKTDSIFVLLTLQ 265

Query: 390 RRKHLMCKKLP 358
           RRKHLMCKKLP
Sbjct: 266 RRKHLMCKKLP 276


>ref|XP_002266260.2| PREDICTED: uncharacterized protein LOC100246822 [Vitis vinifera]
          Length = 263

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 40/72 (55%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = -2

Query: 567 RRGIGWHHSQIM*GTSISNTSTK--MYLHCRMIDAAPFNMYNKAGYXXXXXXXXXXXXXL 394
           RRGIGW+  +      IS  S    +YLHCRMID APFNMY KAGY             L
Sbjct: 174 RRGIGWNLLKAS-EELISQMSLMRDIYLHCRMIDVAPFNMYTKAGYKIVKTDSILILLAL 232

Query: 393 QRRKHLMCKKLP 358
           QRRKHLMCKKLP
Sbjct: 233 QRRKHLMCKKLP 244


Top