BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015494
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39304.3| unnamed protein product [Vitis vinifera]               66   7e-09
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    64   2e-08
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    63   6e-08
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    62   7e-08
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    62   7e-08

>emb|CBI39304.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 44/170 (25%), Positives = 85/170 (50%)
 Frame = +1

Query: 7   EDSGIFLNGAVHWIGNDRENNLLFRVISYNIVDQVFQEFLGPISVEESGMKXXXXXXXXX 186
           +++G  +NG+++W  +  +NN  + + S ++  + ++    P    E+ +K         
Sbjct: 85  DEAGKHVNGSINWAVSRDKNNDHWFIASLDLATESYEVVPQPDCANET-LKPIIRVLGGQ 143

Query: 187 XXXXYYHDDIINLWVMKNYGLSDSWMKLFSMEKSVLNSFPDPSSFISHRHINPRPLCVAK 366
               + +DDII++WVM+ YG+ +SW KL ++       F DP           +PL   K
Sbjct: 144 FCIIFEYDDIIDVWVMQEYGVKESWSKLVTVP-----FFSDPLD-----ANYAKPLFYLK 193

Query: 367 SGEVLLRERGKLVLYDPERKIARTPNIGFISTWHEMDIVIHFASLVPLNS 516
            G +L+   G L+LY+  R  + +P I  +  +HE++  ++  S+V  NS
Sbjct: 194 EGAILIDFYGMLILYNFNRNESTSPMIYGVHHYHEVE--VYLESMVSPNS 241


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
 Frame = +1

Query: 4   WEDSGIFLNGAVHWIGNDRENNLLFRVISYNIVDQVFQEFLG-PISVEESGMKXXXXXXX 180
           ++ S I LNG +HW+ +     L+  ++S ++ ++ F E +  P  V E+          
Sbjct: 198 FQGSAIALNGILHWLVDQLNEGLM--IVSLDLAEEKFLEMVVLPDYVTENWGTELKVLGD 255

Query: 181 XXXXXXYYHDDIINLWVMKNYGLSDSWMKLFSMEKSVLNSFPDPSSFISHRHINPRPLCV 360
                   H      W +K YG   SW+KLFS      NS P P        +N   L V
Sbjct: 256 SLSVCSSSHTTNFEAWTVKGYGSKASWLKLFS-----FNSDPLPG---CKYWLN--VLWV 305

Query: 361 AKSGEVLLRERG-KLVLYDPERKIARTPNIGFISTWHEMDIVIHFASLVPLNSSSGTYVD 537
           AK+G VLL   G ++++Y+P+ +  +  N+   + WH  + + +  SLV  N+ +G+   
Sbjct: 306 AKNGNVLLNYEGLEIIVYNPKEQTLKQFNVP--NNWHWFEAITYIESLVSPNAGNGSVAA 363

Query: 538 PGDE 549
             D+
Sbjct: 364 ADDQ 367


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
 Frame = +1

Query: 13  SGIFLNGAVHWIGNDRENNLLFRVISYNIVDQVFQEFLGPISVEESGMKXXXXXXXXXXX 192
           S + +NG +HW+     N  L R+IS+++ D+ F+E   P+                   
Sbjct: 233 SHVVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREVPCPVGASFGRHCSHLATLRGCLS 292

Query: 193 XXYYHDDIINLWVMKNYGLSDSWMKLFSMEKSV---LNSFPDPSSFISHRHI---NPRPL 354
                   + +WVMK YG+ +SW+K F++   +   L  +P+ S  +   H+     + L
Sbjct: 293 GVVQGFRRLYIWVMKEYGVKESWVKEFTIGVKLPRELEPYPNQSINLQEFHLPLSQTKVL 352

Query: 355 CVAKSGEVLLRER-GKLVLYD 414
           C+  +GE+LL  R G LV YD
Sbjct: 353 CLLNNGEILLEFRCGTLVCYD 373


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
 Frame = +1

Query: 13  SGIFLNGAVHWIGNDRENNLLF-RVISYNIVDQVFQEFLGPISVEESGMKXXXXXXXXXX 189
           SG F++G ++W  N    +  F  ++S ++  + ++E L P   +E              
Sbjct: 208 SGKFVSGTLNWASNYSIGSSSFWTIVSLDLEKETYREVLPPDYEKEECSTPSLSVLKGCL 267

Query: 190 XXXY-YHDDIINLWVMKNYGLSDSWMKLFSMEKSVLNSFPDPSSFISHRHINPRPLCVAK 366
              Y Y      +W+MK+YG+ +SW+KL ++        P+P  F         P C+++
Sbjct: 268 CMNYDYKKTDFVVWLMKDYGVRESWIKLLTIPY-----LPNPEDFSYSG-----PYCISE 317

Query: 367 SGEVLLRERGKLVLYDPERKIARTPNIGFISTWHEMDIVI 486
           +GEVLL     L+LYDP     R P I     W + ++ +
Sbjct: 318 NGEVLLMFEFDLILYDPRDHSFRYPRIEGGKGWFDAEVYV 357


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 11/189 (5%)
 Frame = +1

Query: 13  SGIFLNGAVHWIGNDRENNLLFRVISYNIVDQVFQEFLGPISVEESGMK----XXXXXXX 180
           SG  +NG +HWI     N    R++S+++ D+ F+E   P   +  G+            
Sbjct: 233 SGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKP---DCGGLNRCNYHLVVLRG 289

Query: 181 XXXXXXYYHDDIINLWVMKNYGLSDSWMKLFSMEKSV---LNSFPDPSSFISHRHINPR- 348
                 Y +   + +WVMK Y + +SW+K +++   +   L    D    I     N R 
Sbjct: 290 CLSAAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRV 349

Query: 349 --PLCVAKSGEVLLRERGK-LVLYDPERKIARTPNIGFISTWHEMDIVIHFASLVPLNSS 519
              LCV K+GE+LL  + + LV YDP+    +   +     W +   V+H  SL  +++ 
Sbjct: 350 VGALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQ--TVVHVGSLNWIDTP 407

Query: 520 SGTYVDPGD 546
           S  Y    D
Sbjct: 408 SDAYNQGSD 416