BLASTX nr result

ID: Coptis21_contig00015492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015492
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316631.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-36
ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246...   155   2e-35
ref|XP_002305681.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-35
ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-li...   154   5e-35
ref|XP_004155651.1| PREDICTED: dof zinc finger protein DOF3.5-li...   151   4e-34

>ref|XP_002316631.1| predicted protein [Populus trichocarpa] gi|222859696|gb|EEE97243.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  157 bits (397), Expect = 6e-36
 Identities = 72/96 (75%), Positives = 79/96 (82%), Gaps = 3/96 (3%)
 Frame = -1

Query: 934 MGLSSKQVSGDGFDWAKNLMQNGALELPNVTPIRQQQQQ---PVPTLKCPRCESTNTKFC 764
           MGLSSKQV+GDG DW++ L+Q   LELP    IR+QQQQ       LKCPRCESTNTKFC
Sbjct: 1   MGLSSKQVTGDGLDWSQTLLQAHTLELPKPPVIRRQQQQNQLQFEPLKCPRCESTNTKFC 60

Query: 763 YYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 656
           YYNNYN+SQPRHFCKSC+RHWTKGG LRNVPVGGGR
Sbjct: 61  YYNNYNKSQPRHFCKSCKRHWTKGGNLRNVPVGGGR 96



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -1

Query: 298 FQSPNVLNYSGEAKCSEDLSTSATITPMPV--QLQIPSTNSEVDSSSYWNWDDLNILI*T 125
           FQ  NV NY+GE+     ++T+   T   +   LQ+P+T+S +D ++YWNWDD+   +  
Sbjct: 233 FQPSNVYNYTGESMEDSTITTTMPPTSSTITHSLQVPNTSSGMDMTNYWNWDDIENYVSA 292

Query: 124 DVKQPWDDS 98
           D+  PWDDS
Sbjct: 293 DLNVPWDDS 301


>ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246521 [Vitis vinifera]
          Length = 295

 Score =  155 bits (392), Expect = 2e-35
 Identities = 71/97 (73%), Positives = 80/97 (82%), Gaps = 4/97 (4%)
 Frame = -1

Query: 934 MGLSSKQVSGDGFDWAKNLMQNGALELPNVTPIR----QQQQQPVPTLKCPRCESTNTKF 767
           M LSSKQVSGDG DW + L+Q G+LEL     +R    QQQQQ +  LKCPRC+STNTKF
Sbjct: 1   MVLSSKQVSGDGIDWGQTLLQGGSLELHKPPMMRRQQQQQQQQQLEPLKCPRCDSTNTKF 60

Query: 766 CYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 656
           CY+NNYN+SQPRHFCKSC+RHWTKGGTLRNVPVGGGR
Sbjct: 61  CYFNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGR 97



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
 Frame = -1

Query: 298 FQSPNVLNYSGEAKCSEDL-------STSATITPMPVQLQIPSTNSEVDSSSYWNWDDLN 140
           FQ  NV NY+GEA+  +         STS TIT      Q+P+ +S VD+++YW+WDD++
Sbjct: 221 FQPSNVYNYTGEAEAKDGSTTACFMPSTSGTITQ---PWQMPAASSVVDTTNYWSWDDID 277

Query: 139 ILI*TDVKQPWDDSISK 89
             + TD+  PWDDS  K
Sbjct: 278 TFVSTDLNIPWDDSEMK 294


>ref|XP_002305681.1| predicted protein [Populus trichocarpa] gi|222848645|gb|EEE86192.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  155 bits (392), Expect = 2e-35
 Identities = 70/96 (72%), Positives = 80/96 (83%), Gaps = 3/96 (3%)
 Frame = -1

Query: 934 MGLSSKQVSGDGFDWAKNLMQNGALELPNVTPIRQQQQQ---PVPTLKCPRCESTNTKFC 764
           MGLSSKQV+ +G DW++ L+Q   LELP    IR+QQQQ      +LKCPRCESTNTKFC
Sbjct: 1   MGLSSKQVTSNGLDWSQTLLQERTLELPKPPAIRRQQQQNQLQSESLKCPRCESTNTKFC 60

Query: 763 YYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 656
           YYNNYN+SQPRHFCK+C+RHWTKGGTLRNVPVGGGR
Sbjct: 61  YYNNYNKSQPRHFCKTCKRHWTKGGTLRNVPVGGGR 96



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -1

Query: 298 FQSPNVLNYSGEAKCSEDLST--SATITPMPVQLQIPSTNSEVDSSSYWNWDDLNILI*T 125
           FQ  NV NYSGE+     ++T   +T + +    Q+P+T+S +D ++YWNWDD+   + T
Sbjct: 232 FQPLNVYNYSGESMEDSTITTIMPSTSSTIAQPWQVPNTSSGMDMTNYWNWDDIENYVST 291

Query: 124 DVKQPWDDS 98
           D+   WDDS
Sbjct: 292 DLNVTWDDS 300


>ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-like [Glycine max]
          Length = 285

 Score =  154 bits (389), Expect = 5e-35
 Identities = 69/94 (73%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
 Frame = -1

Query: 934 MGLSSKQVSGDGFDWAKNLMQNGALELPNVTPIRQQQQ-QPVPTLKCPRCESTNTKFCYY 758
           MGLSSKQVS  G DW + L+Q   LELPN  P+R+QQQ QP   LKCPRC+S NTKFCYY
Sbjct: 1   MGLSSKQVSNRGLDWNQTLLQAQNLELPNPPPMRKQQQTQPSEPLKCPRCDSINTKFCYY 60

Query: 757 NNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 656
           NNYN+SQPRH+C++C+RHWTKGGTLRNVPVGGGR
Sbjct: 61  NNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGR 94


>ref|XP_004155651.1| PREDICTED: dof zinc finger protein DOF3.5-like [Cucumis sativus]
          Length = 219

 Score =  151 bits (381), Expect = 4e-34
 Identities = 70/103 (67%), Positives = 81/103 (78%), Gaps = 10/103 (9%)
 Frame = -1

Query: 934 MGLSSKQVSGDGFDWAKNLMQNGALELPNVTP---IRQQQQQ-------PVPTLKCPRCE 785
           MGLSSKQVS DGFDW+K LMQ   LELP + P   +++ Q Q        +  LKCPRC+
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQIQIQPQIEQLKCPRCD 60

Query: 784 STNTKFCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 656
           STNTKFCYYNNYN+SQPRHFC++C+RHWTKGGTLRNVPVGGGR
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGR 103


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