BLASTX nr result

ID: Coptis21_contig00015446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015446
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634404.1| PREDICTED: uncharacterized protein LOC100854...   209   1e-51
ref|XP_002307449.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002520339.1| conserved hypothetical protein [Ricinus comm...   168   2e-39
emb|CBI18993.3| unnamed protein product [Vitis vinifera]              160   5e-37
ref|XP_002890457.1| hypothetical protein ARALYDRAFT_313065 [Arab...   152   1e-34

>ref|XP_003634404.1| PREDICTED: uncharacterized protein LOC100854126 [Vitis vinifera]
          Length = 234

 Score =  209 bits (531), Expect = 1e-51
 Identities = 110/233 (47%), Positives = 136/233 (58%), Gaps = 2/233 (0%)
 Frame = -2

Query: 1045 MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 866
            MGNV  SFFSGF  V+G LFGSP+DFLSGKSC+SVCG TWD ICYIENFCVANLLK    
Sbjct: 1    MGNVIGSFFSGFARVIGDLFGSPLDFLSGKSCSSVCGITWDFICYIENFCVANLLKIAMV 60

Query: 865  XXXXXXXXXXXXXLHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 686
                         L K GIC CIGR+LCK++WAC  SC  A EY C FLC  + +LKR  
Sbjct: 61   SFLLYIVLLFFYLLCKLGICNCIGRSLCKMVWACFISCFSAWEYCCTFLCVKLPRLKRTN 120

Query: 685  RNHRREF--DQXXXXXXXXXXXXXXXSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHRI 512
            R H ++F                   + R IE               HL+KSLRPRSH+I
Sbjct: 121  RGHIKDFQVSDSSCDGEGDSEIFSYNAHRPIEVRRPPSRRWRDHRASHLRKSLRPRSHQI 180

Query: 511  RVDVSRNAVSANGLGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYRRPR 353
            RV +SR++V ++    + H  + +TVH I+V +TSKF +KG +    V+R  R
Sbjct: 181  RVGISRDSVHSSRRNSIKHDNYINTVHGIRVTRTSKFVQKGLSFKGTVHRSRR 233


>ref|XP_002307449.1| predicted protein [Populus trichocarpa] gi|222856898|gb|EEE94445.1|
            predicted protein [Populus trichocarpa]
          Length = 228

 Score =  181 bits (460), Expect = 2e-43
 Identities = 100/236 (42%), Positives = 128/236 (54%), Gaps = 4/236 (1%)
 Frame = -2

Query: 1045 MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 866
            MGN+  SF SGF  V+G LFGSP+DFL+GKSC+SVC + WD  CYIENFCVA+LLK    
Sbjct: 1    MGNIIISFLSGFTKVIGDLFGSPLDFLAGKSCSSVCASPWDFFCYIENFCVASLLKMVAV 60

Query: 865  XXXXXXXXXXXXXLHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 686
                         L+KTGIC C+G +LCK  WACL +      Y C+F+   +  LKR R
Sbjct: 61   LALLYIVLLFFYLLYKTGICQCVGHSLCKTAWACLVAWFSMWGYCCIFMSDKLIMLKRVR 120

Query: 685  RNHR---REFDQXXXXXXXXXXXXXXXSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHR 515
              HR    EFD                  R++E             R+HL+KSLRPRSHR
Sbjct: 121  HGHRSDSSEFDTSEEDFDHIP--------RTMEISGSSSRRTRDYRRVHLRKSLRPRSHR 172

Query: 514  IRVDVSRNAVSANG-LGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYRRPRR 350
            IRV +  +    +G +    H KH ST+H+I+V  TS+F +K      + Y R RR
Sbjct: 173  IRVGLGSDFDYGSGRIPNAKHGKHFSTIHSIRVTHTSQFVRKRAGFRGRAYPRQRR 228


>ref|XP_002520339.1| conserved hypothetical protein [Ricinus communis]
            gi|223540558|gb|EEF42125.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 230

 Score =  168 bits (425), Expect = 2e-39
 Identities = 100/237 (42%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
 Frame = -2

Query: 1045 MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 866
            MGN+  SF SGF N +  LF SP+DFLSGKSC+SVCG+TWD +CYIENFCVANLLK    
Sbjct: 1    MGNIIKSFTSGFTNTISDLFTSPLDFLSGKSCSSVCGSTWDFVCYIENFCVANLLKLAMV 60

Query: 865  XXXXXXXXXXXXXLHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 686
                         L+K  I  C+G +LCK+ WAC+       +  C FL  ++  LKR  
Sbjct: 61   LALLYIVLLLIYLLYKLRIFECVGHSLCKLAWACMVCWISLWKNCCFFLRDSLIMLKRVS 120

Query: 685  RNHRR---EFDQXXXXXXXXXXXXXXXSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHR 515
             +HRR   EFD                S R +                HL++SLRP+SHR
Sbjct: 121  HHHRRDSSEFDTSEDDCYDYEHRTMDVSSRPLS------RQMMDYRTAHLRRSLRPKSHR 174

Query: 514  IRVDVSRNAVSANGLGMVDHYK---HHSTVHNIKVAKTSKFAKKGGNVNNKVYRRPR 353
            IRV +S    S +G G   H K   H STV+NI+V ++SKF +KG N   K + R R
Sbjct: 175  IRVGLSTG--SEHGYGRYHHIKHANHGSTVNNIRVIQSSKFVRKGINHRRKGHSRER 229


>emb|CBI18993.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  160 bits (405), Expect = 5e-37
 Identities = 76/127 (59%), Positives = 86/127 (67%)
 Frame = -2

Query: 1045 MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 866
            MGNV  SFFSGF  V+G LFGSP+DFLSGKSC+SVCG TWD ICYIENFCVANLLK    
Sbjct: 1    MGNVIGSFFSGFARVIGDLFGSPLDFLSGKSCSSVCGITWDFICYIENFCVANLLKIAMV 60

Query: 865  XXXXXXXXXXXXXLHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 686
                         L K GIC CIGR+LCK++WAC  SC  A EY C FLC  + +LKR  
Sbjct: 61   SFLLYIVLLFFYLLCKLGICNCIGRSLCKMVWACFISCFSAWEYCCTFLCVKLPRLKRTN 120

Query: 685  RNHRREF 665
            R H ++F
Sbjct: 121  RGHIKDF 127


>ref|XP_002890457.1| hypothetical protein ARALYDRAFT_313065 [Arabidopsis lyrata subsp.
            lyrata] gi|297336299|gb|EFH66716.1| hypothetical protein
            ARALYDRAFT_313065 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  152 bits (384), Expect = 1e-34
 Identities = 82/224 (36%), Positives = 115/224 (51%)
 Frame = -2

Query: 1045 MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 866
            MGNV  SFF+GF + +G  FGSP+DFLSGKSC+SVC + WD IC++ENFCVANL K    
Sbjct: 1    MGNVLDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICFVENFCVANLAKAALI 60

Query: 865  XXXXXXXXXXXXXLHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 686
                         L+K G  +CI    C++LWA ++   Y   Y C F C+++   KR+R
Sbjct: 61   LILSYFFLFFIYMLYKVGFWHCIIHGFCRLLWALVSCWFYMLSYCCSFFCYDLLHSKRRR 120

Query: 685  RNHRREFDQXXXXXXXXXXXXXXXSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHRIRV 506
            R     + +                  S                  L+KSLRPRSHR+RV
Sbjct: 121  RRRHHRYIEEAYDDNSDNDDDDDGDDGSFTYHRSRPECRREE---RLRKSLRPRSHRVRV 177

Query: 505  DVSRNAVSANGLGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNN 374
             V ++  S +GL    H    S +H ++V++ SKF +K   +N+
Sbjct: 178  GVRKDHRSDSGLS--QHADGSSPIHGVRVSRESKFTRKEPEMNH 219


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