BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015437
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   212   3e-53
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]   212   3e-53
ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   179   2e-43
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   178   4e-43
gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   178   5e-43

>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/142 (72%), Positives = 122/142 (85%)
 Frame = +2

Query: 17  MVYLKTYENKTQILNLNPKSTTLETLKEQIEQKLNIPISHQRLFLSPKHLLGPKSTLISN 196
           MV++K+++NKT ILNLNPK+TT ETLK QIE++L IP+S QR+FL+P+ L+G +S LI+ 
Sbjct: 1   MVFVKSFDNKTLILNLNPKATTFETLKHQIERELGIPLSLQRIFLNPRRLIGDESALIAE 60

Query: 197 LGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSDIG 376
           LGV+ +S LTLH+PL GG  MQ P  PKP+LEFLN KPPPNYVAGLGRGATGFTTRSDIG
Sbjct: 61  LGVRSDSALTLHLPLFGG--MQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIG 118

Query: 377 PARAAPDLPDRSATTIGGGAGP 442
           PARAAPDLPDRSATTIGG A P
Sbjct: 119 PARAAPDLPDRSATTIGGAAAP 140


>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/142 (72%), Positives = 122/142 (85%)
 Frame = +2

Query: 17  MVYLKTYENKTQILNLNPKSTTLETLKEQIEQKLNIPISHQRLFLSPKHLLGPKSTLISN 196
           MV++K+++NKT ILNLNPK+TT ETLK QIE++L IP+S QR+FL+P+ L+G +S LI+ 
Sbjct: 1   MVFVKSFDNKTLILNLNPKATTFETLKHQIERELGIPLSLQRIFLNPRRLIGDESALIAE 60

Query: 197 LGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSDIG 376
           LGV+ +S LTLH+PL GG  MQ P  PKP+LEFLN KPPPNYVAGLGRGATGFTTRSDIG
Sbjct: 61  LGVRSDSALTLHLPLFGG--MQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIG 118

Query: 377 PARAAPDLPDRSATTIGGGAGP 442
           PARAAPDLPDRSATTIGG A P
Sbjct: 119 PARAAPDLPDRSATTIGGAAAP 140


>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  179 bits (454), Expect = 2e-43
 Identities = 95/147 (64%), Positives = 110/147 (74%), Gaps = 6/147 (4%)
 Frame = +2

Query: 17  MVYLKTYENKTQILNLNPKSTTLETLKEQIEQKLNIPISHQRLFLSPKHLL------GPK 178
           MV++ +  +KT  ++LNP +TTL  LK  I+Q L +PISHQRLFLS    L         
Sbjct: 1   MVFIVSPNHKTFSIDLNPNTTTLHLLKLAIQQTLTLPISHQRLFLSHSRRLTADNDGSDD 60

Query: 179 STLISNLGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFT 358
           S LIS+LGV   STLTLH+P LGGT   PP  PKP+ +FLN+KPPPNYVAGLGRGATGFT
Sbjct: 61  SLLISDLGVGPYSTLTLHVPFLGGTN--PPAVPKPRFDFLNSKPPPNYVAGLGRGATGFT 118

Query: 359 TRSDIGPARAAPDLPDRSATTIGGGAG 439
           TRSDIGPARAAPDLPDRSATTIGG +G
Sbjct: 119 TRSDIGPARAAPDLPDRSATTIGGTSG 145


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
           gi|449514699|ref|XP_004164455.1| PREDICTED:
           pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  178 bits (452), Expect = 4e-43
 Identities = 95/142 (66%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
 Frame = +2

Query: 17  MVYLKTYENKTQILNLNPKSTTLETLKEQIEQKLNIPISHQRLFLSPKHLLGP--KSTLI 190
           MV+L     KT  LNLNP +T++  LK  IE   +IPIS QRLFLS    L     STL+
Sbjct: 1   MVFLSIPNQKTLFLNLNPSTTSILNLKRAIEDVSHIPISFQRLFLSQSFQLSHFNDSTLL 60

Query: 191 SNLGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSD 370
           S+L +  NSTLTLH+PL GG  MQ P  PKP+L+FLN+KPPPNYVAGLGRGATGFTTRSD
Sbjct: 61  SHLRILPNSTLTLHVPLFGG--MQAPTIPKPRLDFLNSKPPPNYVAGLGRGATGFTTRSD 118

Query: 371 IGPARAAPDLPDRSATTIGGGA 436
           IGPARAAPDLPDRSATTIGG A
Sbjct: 119 IGPARAAPDLPDRSATTIGGAA 140


>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  178 bits (451), Expect = 5e-43
 Identities = 96/143 (67%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
 Frame = +2

Query: 17  MVYLKTYENKTQILNLNPKSTTLETLKEQIEQKLNIPISHQRLFLSPKHLLGPKSTL-IS 193
           MV+LK+ +NKT  L+L+P +T+L+ L  +IE+K  +P++ QRLFLS + L+G   T  IS
Sbjct: 1   MVFLKSPDNKTLTLHLDPTTTSLQALHLEIERKSGVPVTLQRLFLSSRRLIGGDGTATIS 60

Query: 194 NLGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSDI 373
             GV  NSTLTL+ PLLGG  MQ P  PK +LEFLN KPPPNYVAGLGRGATGFTTRSDI
Sbjct: 61  AFGVGLNSTLTLYFPLLGG--MQAPVVPKSRLEFLNTKPPPNYVAGLGRGATGFTTRSDI 118

Query: 374 GPARAAPDLPDRSATTIGGGAGP 442
           GPARAAPDLPDRSATTI GGAGP
Sbjct: 119 GPARAAPDLPDRSATTI-GGAGP 140