BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015419
         (1887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   674   0.0  
ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   669   0.0  
emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   646   0.0  
ref|XP_002525276.1| Chitin-inducible gibberellin-responsive prot...   640   0.0  
ref|XP_002332364.1| GRAS family transcription factor [Populus tr...   629   e-178

>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  674 bits (1738), Expect = 0.0
 Identities = 353/508 (69%), Positives = 386/508 (75%)
 Frame = +1

Query: 91   MDTLFRLVSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQQEEECSNFFMDEDDFXX 270
            MDTLFRLVSLQ                              +Q++EEC NFFMDE+DF  
Sbjct: 1    MDTLFRLVSLQSDQSYNSSRTSSSSRSSRQNHHHH------HQEDEECFNFFMDEEDFSS 54

Query: 271  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFEPPEFTSFSPAPDLNLEFISSTT 450
                                               AFEP EF SFSPA DL+LEF SS  
Sbjct: 55   SSSKHYYPYQQQTHPSTTTTPTTTNTSTPTHH---AFEPTEF-SFSPARDLHLEFNSS-- 108

Query: 451  SSTKWASDLLLETARAIADKNSSRVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRITD 630
            +S KWAS++LLETARAIADKNS+RVQQLMWMLNELSSPYGDTDQKLA+YFLQALFSR+TD
Sbjct: 109  ASGKWASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTD 168

Query: 631  SGERCYRTLTSATEKNCSFELTRKMVLKFQEVSPWTTFGHVASNGAILEAFDGESKLHII 810
            SGERCYRTL SA+EK CSFE TRKMVLKFQEVSPWTTFGHVA NGAI+EA +GESKLHII
Sbjct: 169  SGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGESKLHII 228

Query: 811  DISNTYCTQWPTLLEALATRTDETPHLRLTTVVTNKAGGATSGVTAVHKVMKEIGNRMEK 990
            DISNTYCTQWPTLLEALATRTDETPHLRLTTVVT+KAG  T G+  V K+MKEIGNRMEK
Sbjct: 229  DISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAG--TGGMAPVQKLMKEIGNRMEK 286

Query: 991  FARLMGVPFKFNVVHHVGDLSELNLSDLDIKDDEALAVNCINTLHSVGVTGNRRDVVLSA 1170
            FARLMGVPFKFNV+HH GDLS LNL++LDIKDDEALAVNC+  LHSV   GNRRD+V+S+
Sbjct: 287  FARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAFGNRRDIVVSS 346

Query: 1171 FHRLQPKIVTVVEEEADLDVGVDGFEFVKGFQECLKWFRVYFESLDESFPRTSNERLMLE 1350
            F RL P+I+TVVEEEADLDVGVDGF+FVKGFQECL+WFRVY ESLDESFPRTSNERLMLE
Sbjct: 347  FRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLE 406

Query: 1351 RAAGKALVDLVACQPSESNERRESATRWVNRLRTAGFXXXXXXXXXXXXXXXLLRRYKEG 1530
            RAAG+A+VDLVAC PSES ERRE+ATRW  RL  +GF               LLRRYKEG
Sbjct: 407  RAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEG 466

Query: 1531 WSMIPCSDAGIFLAWKDQPVVWACAWKP 1614
            WSM   SDAGIFL+WKDQPVVW  AWKP
Sbjct: 467  WSMTQSSDAGIFLSWKDQPVVWTSAWKP 494


>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  669 bits (1726), Expect = 0.0
 Identities = 353/520 (67%), Positives = 386/520 (74%), Gaps = 12/520 (2%)
 Frame = +1

Query: 91   MDTLFRLVSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQQEEECSNFFMDEDDFXX 270
            MDTLFRLVSLQ                              +Q++EEC NFFMDE+DF  
Sbjct: 1    MDTLFRLVSLQSDQSYNSSRTSSSSRSSRQNHHHH------HQEDEECFNFFMDEEDFSS 54

Query: 271  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------AFEPPEFTSFSPA 414
                                                           AFEP EF SFSPA
Sbjct: 55   SSSKHYYPYQQQTHPSTTTTPTTTNTQTHPSTTTTPTTTNTSTPTHHAFEPTEF-SFSPA 113

Query: 415  PDLNLEFISSTTSSTKWASDLLLETARAIADKNSSRVQQLMWMLNELSSPYGDTDQKLAS 594
             DL+LEF SS  +S KWAS++LLETARAIADKNS+RVQQLMWMLNELSSPYGDTDQKLA+
Sbjct: 114  RDLHLEFNSS--ASGKWASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAA 171

Query: 595  YFLQALFSRITDSGERCYRTLTSATEKNCSFELTRKMVLKFQEVSPWTTFGHVASNGAIL 774
            YFLQALFSR+TDSGERCYRTL SA+EK CSFE TRKMVLKFQEVSPWTTFGHVA NGAI+
Sbjct: 172  YFLQALFSRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIM 231

Query: 775  EAFDGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTNKAGGATSGVTAVH 954
            EA +GESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVT+KAG  T G+  V 
Sbjct: 232  EALEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAG--TGGMAPVQ 289

Query: 955  KVMKEIGNRMEKFARLMGVPFKFNVVHHVGDLSELNLSDLDIKDDEALAVNCINTLHSVG 1134
            K+MKEIGNRMEKFARLMGVPFKFNV+HH GDLS LNL++LDIKDDEALAVNC+  LHSV 
Sbjct: 290  KLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVT 349

Query: 1135 VTGNRRDVVLSAFHRLQPKIVTVVEEEADLDVGVDGFEFVKGFQECLKWFRVYFESLDES 1314
              GNRRD+V+S+F RL P+I+TVVEEEADLDVGVDGF+FVKGFQECL+WFRVY ESLDES
Sbjct: 350  AFGNRRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDES 409

Query: 1315 FPRTSNERLMLERAAGKALVDLVACQPSESNERRESATRWVNRLRTAGFXXXXXXXXXXX 1494
            FPRTSNERLMLERAAG+A+VDLVAC PSES ERRE+ATRW  RL  +GF           
Sbjct: 410  FPRTSNERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCD 469

Query: 1495 XXXXLLRRYKEGWSMIPCSDAGIFLAWKDQPVVWACAWKP 1614
                LLRRYKEGWSM   SDAGIFL+WKDQPVVW  AWKP
Sbjct: 470  DVRALLRRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWKP 509


>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  646 bits (1666), Expect = 0.0
 Identities = 339/508 (66%), Positives = 370/508 (72%)
 Frame = +1

Query: 91   MDTLFRLVSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQQEEECSNFFMDEDDFXX 270
            MDTLFRLVSLQ                              +Q++EEC NFFMDE+DF  
Sbjct: 1    MDTLFRLVSLQSDQSYNSSRTSSSSRSSRQNHHHH------HQEDEECFNFFMDEEDFSS 54

Query: 271  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFEPPEFTSFSPAPDLNLEFISSTT 450
                                                  PP   S SP P           
Sbjct: 55   SSSKHYYPYQQQTHPSSPPPPPPPTPALLLIMP---LSPPN--SLSPLP----------- 98

Query: 451  SSTKWASDLLLETARAIADKNSSRVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRITD 630
                WAS++LLETARAIADKNS+RVQQLMWMLNELSSPYGDTDQKLA+YFLQALFSR+TD
Sbjct: 99   ----WASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTD 154

Query: 631  SGERCYRTLTSATEKNCSFELTRKMVLKFQEVSPWTTFGHVASNGAILEAFDGESKLHII 810
            SGERCYRTL SA+EK CSFE TRKMVLKFQEVSPWTTFGHVA NGAI+EA +GESKLHII
Sbjct: 155  SGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGESKLHII 214

Query: 811  DISNTYCTQWPTLLEALATRTDETPHLRLTTVVTNKAGGATSGVTAVHKVMKEIGNRMEK 990
            DISNTYCTQWPTLLEALATRTDETPHLRLTTVVT+KAG  T G+  V K+MKEIGNRMEK
Sbjct: 215  DISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAG--TGGMAPVQKLMKEIGNRMEK 272

Query: 991  FARLMGVPFKFNVVHHVGDLSELNLSDLDIKDDEALAVNCINTLHSVGVTGNRRDVVLSA 1170
            FARLMGVPFKFNV+HH GDLS LNL++LDIKDDEALAVNC+  LHSV   GNRRD+V+S+
Sbjct: 273  FARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAVGNRRDIVVSS 332

Query: 1171 FHRLQPKIVTVVEEEADLDVGVDGFEFVKGFQECLKWFRVYFESLDESFPRTSNERLMLE 1350
            F RL P+I+TVVEEEADLDVGVDGF+FVKGFQECL+WFRVY ESLDESFPRTSNERLMLE
Sbjct: 333  FRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLE 392

Query: 1351 RAAGKALVDLVACQPSESNERRESATRWVNRLRTAGFXXXXXXXXXXXXXXXLLRRYKEG 1530
            RAAG+A+VDLVAC PSES ERRE+ATRW  RL  +GF               LLRRYKEG
Sbjct: 393  RAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEG 452

Query: 1531 WSMIPCSDAGIFLAWKDQPVVWACAWKP 1614
            WSM   SDAGIFL+WKDQPVVW  AWKP
Sbjct: 453  WSMTQSSDAGIFLSWKDQPVVWTSAWKP 480


>ref|XP_002525276.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
            communis] gi|223535434|gb|EEF37104.1| Chitin-inducible
            gibberellin-responsive protein, putative [Ricinus
            communis]
          Length = 512

 Score =  640 bits (1650), Expect = 0.0
 Identities = 326/518 (62%), Positives = 372/518 (71%), Gaps = 10/518 (1%)
 Frame = +1

Query: 91   MDTLFRLVSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXY----QQEEECSNFFMDED 258
            MDTLFRLVSLQ                              +    Q++EEC NFFMDE+
Sbjct: 1    MDTLFRLVSLQQQQSDQSFNNSTSRTSSSSRSSRQNNHHHHHHQYQQEDEECFNFFMDEE 60

Query: 259  DFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFEPPEFTSFSPAPDLNLEFI 438
            DF                                       E  +  SFSP+ DLN +F 
Sbjct: 61   DFSSSSSKHYYPYHHQQQQQHTTATTTTTTVTTPNTTTSTLESTDHFSFSPSHDLNFDF- 119

Query: 439  SSTTSSTKWASDLLLETARAIADKNSSRVQQLMWMLNELSSPYGDTDQKLASYFLQALFS 618
                 S++WA+D+LLETARAIADKNS+RVQQLMWMLNEL SPYGD D+KLASYFLQALFS
Sbjct: 120  -----SSRWATDILLETARAIADKNSARVQQLMWMLNELGSPYGDIDKKLASYFLQALFS 174

Query: 619  RITDSGERCYRTLTSATEKNCSFELTRKMVLKFQEVSPWTTFGHVASNGAILEAFDGESK 798
            R+TDSGERCYRTL SA++K CSFE TRKMVLKFQEVSPWTTFGHV+ NGAI+EAF+GESK
Sbjct: 175  RMTDSGERCYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEGESK 234

Query: 799  LHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTNK------AGGATSGVTAVHKV 960
            LHIIDISNTYCTQWPTLLEALATRTDETPHLRLTT+V +K       GG   G+ +  KV
Sbjct: 235  LHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTIVASKTNGGGGGGGGNCGLVSAQKV 294

Query: 961  MKEIGNRMEKFARLMGVPFKFNVVHHVGDLSELNLSDLDIKDDEALAVNCINTLHSVGVT 1140
            MKEIG+RMEKFARLMGVPFKFNV+HH GDL +LNLS+LDIK+DEALA+NCI +LHSV   
Sbjct: 295  MKEIGSRMEKFARLMGVPFKFNVIHHAGDLCDLNLSELDIKEDEALAINCIGSLHSVTTV 354

Query: 1141 GNRRDVVLSAFHRLQPKIVTVVEEEADLDVGVDGFEFVKGFQECLKWFRVYFESLDESFP 1320
             NRRD ++S F RLQP+I+T+VEEEADLDVG+DG +FV+GFQECL+WFRVYFESL+ESF 
Sbjct: 355  ANRRDYIISNFRRLQPRIITIVEEEADLDVGIDGLDFVRGFQECLRWFRVYFESLEESFS 414

Query: 1321 RTSNERLMLERAAGKALVDLVACQPSESNERRESATRWVNRLRTAGFXXXXXXXXXXXXX 1500
            RTSNERLMLER+AG+A+VDLVACQPSES ERRE ATRW +RL   G+             
Sbjct: 415  RTSNERLMLERSAGRAIVDLVACQPSESIERREKATRWSSRLHACGYSPILFSDEVCDDV 474

Query: 1501 XXLLRRYKEGWSMIPCSDAGIFLAWKDQPVVWACAWKP 1614
              LLRRYKEGWSM     AGIFL WK+QPVVWA AWKP
Sbjct: 475  RALLRRYKEGWSMTQSGHAGIFLCWKEQPVVWASAWKP 512


>ref|XP_002332364.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222874681|gb|EEF11812.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 510

 Score =  629 bits (1623), Expect = e-178
 Identities = 327/521 (62%), Positives = 371/521 (71%), Gaps = 13/521 (2%)
 Frame = +1

Query: 91   MDTLFRLVSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQQE-EECSNFFMDEDDFX 267
            MDTLFRLVSLQ                              YQQE EEC NFFMDE+DF 
Sbjct: 1    MDTLFRLVSLQQQSEQSFNSTSRTSSSSRSSRQNNNHHHHHYQQEDEECFNFFMDEEDFS 60

Query: 268  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------FEPPEFTSFSPAPDLNL 429
                                                        +  +F SFSP+ DLN 
Sbjct: 61   SSSSKHYYPPYHHNQQQQHQHQTTTTTPTTTTTNTSTPSTHHVLDSADF-SFSPSHDLNF 119

Query: 430  EFISSTTSSTKWASDLLLETARAIADKNSSRVQQLMWMLNELSSPYGDTDQKLASYFLQA 609
            EF      S KW +D+LLE+A AIADKNS+R+QQLMWMLNEL SPYGDT+QKLASYFLQA
Sbjct: 120  EF------SGKWVTDILLESAHAIADKNSARLQQLMWMLNELGSPYGDTEQKLASYFLQA 173

Query: 610  LFSRITDSGERCYRTLTSATEKNCSFELTRKMVLKFQEVSPWTTFGHVASNGAILEAFDG 789
            LFSR+ DSGERCYRTL SA+EK CSF+ TRKMVLKFQEVSPWTTFGHV+ NGAI+EAF+G
Sbjct: 174  LFSRMNDSGERCYRTLASASEKTCSFDSTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEG 233

Query: 790  ESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTNKAGG------ATSGVTAV 951
            ESKLHIIDISNTYCTQWPTLLEALATRTDETPHL+LTTVV +K+ G      +T G+ +V
Sbjct: 234  ESKLHIIDISNTYCTQWPTLLEALATRTDETPHLKLTTVVASKSSGNNIGLTSTGGLASV 293

Query: 952  HKVMKEIGNRMEKFARLMGVPFKFNVVHHVGDLSELNLSDLDIKDDEALAVNCINTLHSV 1131
            HKVMKEIGNRMEKFARLMGVPFKFNV+HH GDL +LNL++LD+KDDEALA+NC+  LHS+
Sbjct: 294  HKVMKEIGNRMEKFARLMGVPFKFNVIHHAGDLCDLNLAELDVKDDEALAINCVGALHSI 353

Query: 1132 GVTGNRRDVVLSAFHRLQPKIVTVVEEEADLDVGVDGFEFVKGFQECLKWFRVYFESLDE 1311
                 RRD V+S+F  LQP+I+TVVEEEADL    DG +FVKGFQECL+WFRVYFESLDE
Sbjct: 354  TPASRRRDYVISSFRTLQPRIITVVEEEADL----DGLDFVKGFQECLRWFRVYFESLDE 409

Query: 1312 SFPRTSNERLMLERAAGKALVDLVACQPSESNERRESATRWVNRLRTAGFXXXXXXXXXX 1491
            SFPRTSNE+LMLERAAG+A+VDLVAC PS+S ERRE+ATRW  RL + GF          
Sbjct: 410  SFPRTSNEQLMLERAAGRAIVDLVACPPSDSIERRETATRWSGRLHSCGFSPIIFSDEVC 469

Query: 1492 XXXXXLLRRYKEGWSMIPCSDAGIFLAWKDQPVVWACAWKP 1614
                 LLRRYKEGWSM  C DAGIFL WK+QPVVWA AW+P
Sbjct: 470  DDVRALLRRYKEGWSMTQCGDAGIFLCWKEQPVVWASAWRP 510