BLASTX nr result

ID: Coptis21_contig00015409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015409
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278220.1| PREDICTED: uncharacterized protein LOC100260...    78   2e-12
ref|XP_002522942.1| conserved hypothetical protein [Ricinus comm...    70   3e-10
ref|XP_002518488.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_002885368.1| hypothetical protein ARALYDRAFT_898447 [Arab...    62   7e-08
ref|XP_002317110.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07

>ref|XP_002278220.1| PREDICTED: uncharacterized protein LOC100260689 [Vitis vinifera]
          Length = 125

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 13/115 (11%)
 Frame = -2

Query: 639 MGNCIRHESSAVWAGEDWSSV-------------ISKEPAAKDKLRNKMKKNQRSATTLA 499
           MGNC+RHE    WAGEDW S+             IS + A K +  + +K+N   +++ +
Sbjct: 1   MGNCLRHEPPMQWAGEDWGSLAPPTHFSGDTHHEISSDKAMKGEKDSLLKENPGFSSSSS 60

Query: 498 GDKRIVRSSTEIKVRITKKELEELLQKVDDVEGLSVEQALSQFMNSRHQYDIQER 334
                  ++TE+KV+I+KK+LEELL KV DV+GL+V Q L   MN   +++ ++R
Sbjct: 61  SSSS--STTTEVKVKISKKQLEELLGKV-DVQGLTVHQVLQHLMNVSDRFETEQR 112


>ref|XP_002522942.1| conserved hypothetical protein [Ricinus communis]
           gi|223537754|gb|EEF39372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
 Frame = -2

Query: 639 MGNCIRHESSAVWAGEDWSSVISKEPAAKDKLRNKMKKNQRSATTLAGDKR------IVR 478
           MGNC+R ESS  W G+DW S     P   D+  +   + +     L G+ +         
Sbjct: 1   MGNCLRRESSMQWGGDDWGS-----PLPDDRFFSSNTRQEEEKGLLLGEDKGSTISSATV 55

Query: 477 SSTEIKVRITKKELEELLQKVDDVEGLSVEQALSQFM 367
           +STE+K++ITKK+LEELL +V D++ LS+EQ L+Q M
Sbjct: 56  TSTEVKIKITKKQLEELLGRV-DMKELSIEQVLAQLM 91


>ref|XP_002518488.1| conserved hypothetical protein [Ricinus communis]
           gi|223542333|gb|EEF43875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
 Frame = -2

Query: 639 MGNCIRH---ESSAVWAGEDWSSVISKEPAAKDKLRNK-MKKNQR----SATTLAGDKRI 484
           MGNC R     SS VWAG+DW SV  ++ ++ D   +  + + QR        + G    
Sbjct: 1   MGNCCRRVSSSSSVVWAGDDWGSVGQEKISSSDHSHHHDITERQRLLGEDLDMMGGFMSS 60

Query: 483 VRSST-EIKVRITKKELEELLQKVDDVEGLSVEQALSQFMNS 361
             SST E+K++ITKKELEEL+ +V D++GLS+E+ L+  +NS
Sbjct: 61  SSSSTREVKIKITKKELEELMARV-DMQGLSMEEVLASLINS 101


>ref|XP_002885368.1| hypothetical protein ARALYDRAFT_898447 [Arabidopsis lyrata subsp.
           lyrata] gi|297331208|gb|EFH61627.1| hypothetical protein
           ARALYDRAFT_898447 [Arabidopsis lyrata subsp. lyrata]
          Length = 116

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 40/119 (33%), Positives = 58/119 (48%)
 Frame = -2

Query: 639 MGNCIRHESSAVWAGEDWSSVISKEPAAKDKLRNKMKKNQRSATTLAGDKRIVRSSTEIK 460
           MGNC+RHES   WAGEDW   I+++   +D   +           +  D +    S EIK
Sbjct: 1   MGNCLRHESEMHWAGEDWDEFITED--EEDHHYSSKTTRDGKTVVVTRDSKSSVPSHEIK 58

Query: 459 VRITKKELEELLQKVDDVEGLSVEQALSQFMNSRHQYDIQERXXXXXXXXXXXSIPEVD 283
           +R+TKK+L +LL KV +V  L+  Q  +    S +    +E            SIPEV+
Sbjct: 59  IRLTKKQLHDLLSKV-NVHDLTFHQQAAFSCPSLNNRGYEEANHQRLWRPVLQSIPEVN 116


>ref|XP_002317110.1| predicted protein [Populus trichocarpa] gi|222860175|gb|EEE97722.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 10/110 (9%)
 Frame = -2

Query: 639 MGNCIRHESSAVWAGEDWSSVI------SKEPAAKDKLRNKMKKNQRSATTLAGDKRIVR 478
           MGNC R  SS+VWAG+DW S+I      ++   A D   +     +R     +       
Sbjct: 1   MGNCCRSASSSVWAGDDWGSMIHDKHQVTRFDEADDHEEHGASIGRRRPLDTSCSSS--G 58

Query: 477 SSTEIKVRITKKELEELLQKVDDVEGLSVEQAL----SQFMNSRHQYDIQ 340
           S+ E+K++ITK+ELEE++    +++GLS+E+ L     ++ +S H+++++
Sbjct: 59  STREVKIKITKRELEEIIMARVNMQGLSMEEVLLARSIEYSSSDHEFEME 108


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