BLASTX nr result

ID: Coptis21_contig00015392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015392
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515051.1| conserved hypothetical protein [Ricinus comm...   396   e-120
emb|CBI34821.3| unnamed protein product [Vitis vinifera]              380   e-112
ref|XP_002282172.1| PREDICTED: uncharacterized protein LOC100261...   373   e-111
emb|CAN83922.1| hypothetical protein VITISV_026532 [Vitis vinifera]   373   e-111
ref|XP_002526965.1| conserved hypothetical protein [Ricinus comm...   377   e-111

>ref|XP_002515051.1| conserved hypothetical protein [Ricinus communis]
           gi|223546102|gb|EEF47605.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 701

 Score =  396 bits (1017), Expect(2) = e-120
 Identities = 192/282 (68%), Positives = 229/282 (81%)
 Frame = +2

Query: 32  RGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLFNVVEDILQRATPGTEGLVHPTNQA 211
           RG+RH+FSTSDD  MMKQI  THAPDGRE DV+PL NVVED+ QRA P       P+  A
Sbjct: 11  RGERHMFSTSDDNAMMKQIQATHAPDGREFDVRPLLNVVEDVFQRAVP-------PSGLA 63

Query: 212 QLDAFDDKTHHVDFLVMLEALAYTIHKISCEISCKCSGGGDAHATTLALFNSLSSYSWDA 391
            +    +KT    F  ML+ L+YTI+KISCEI+CKCSGGGDAHATTLA+FN +SSYSWDA
Sbjct: 64  TIVQPQEKTLQNGFYEMLDLLSYTINKISCEIACKCSGGGDAHATTLAIFNLVSSYSWDA 123

Query: 392 KVVLALAAFGVSYGEFWLVAKLYPTNPLAKSIALLKQLPDILDHNESLRPRFDALKNLIK 571
           K+VLALAAF V+YGEFWLVA LY TNPLAK++ALLKQLPDIL+  ++L+P+F+A+ +LI+
Sbjct: 124 KLVLALAAFAVNYGEFWLVAHLYLTNPLAKAVALLKQLPDILERADALKPKFEAVSSLIR 183

Query: 572 EMLEVTQCIVEFKELPAQYINHETPVMSMALAHIPTAVYWTIRSVVACSSQIIGLIGLGH 751
             L+V +CIVEFKELP QYI  + P M +A AHIPTAVYWTIRS+VAC++QIIGLIG+GH
Sbjct: 184 AALDVAKCIVEFKELPPQYITPDAPEMLIATAHIPTAVYWTIRSIVACATQIIGLIGMGH 243

Query: 752 EYITSTTEAWELSSLAHKVNNIHGHLRKQLALCYQHIDEKTH 877
           EY+ STTEAWELSSLAHKV +IH HL +QL LCY HIDEK H
Sbjct: 244 EYMASTTEAWELSSLAHKVRSIHEHLMRQLTLCYHHIDEKRH 285



 Score = 64.7 bits (156), Expect(2) = e-120
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +3

Query: 867 RRHIEAYQTLVRLFETIHIDNMKILRALIYAHDDLL 974
           +RH+EAYQTL+RLF+TIHIDN+KILRALIYA DD L
Sbjct: 283 KRHVEAYQTLIRLFDTIHIDNIKILRALIYAKDDQL 318


>emb|CBI34821.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  380 bits (977), Expect(2) = e-112
 Identities = 174/286 (60%), Positives = 235/286 (82%), Gaps = 1/286 (0%)
 Frame = +2

Query: 17   LQQLIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLFNVVEDILQRATPGTEGLVH 196
            LQQ+I+GDR + + SDD  MMKQI  THA DGR++DV+PL+ +VEDIL R+TPG + +V 
Sbjct: 851  LQQMIKGDRSMITMSDDNAMMKQIHATHAHDGRQIDVRPLYQLVEDILNRSTPGVDAIV- 909

Query: 197  PTNQAQLDAFDDKTHHVDFLVMLEALAYTIHKISCEISCKCSGGGDAHATTLALFNSLSS 376
             T + +++  +D+T H  F+ M+EAL++TI +ISCEI+CKCS GGDAHATTL++FN L+S
Sbjct: 910  TTTETRVEPLEDRTQHAGFIAMIEALSFTIDRISCEIACKCSAGGDAHATTLSIFNMLAS 969

Query: 377  YSWDAKVVLALAAFGVSYGEFWLVAKLYPTNPLAKSIALLKQLPDILDHNESLRPRFDAL 556
            YSWDAK+VL LAAF ++YGEFWL+A++Y +N LAKS+A+LKQ+P +L+H+  L+PRFDAL
Sbjct: 970  YSWDAKLVLTLAAFALNYGEFWLLAQIYSSNQLAKSMAILKQVPILLEHSALLKPRFDAL 1029

Query: 557  KNLIKEMLEVTQCIVEFKELPAQYINHETPVMSMALAHIPTAVYWTIRSVVACSSQIIGL 736
             NLI+ M++VT+CI+EFKELP  YI  + P +S+A+AHIPTAVYWTIRS+VAC++QI  L
Sbjct: 1030 NNLIRAMMDVTRCIIEFKELPPMYITQDVPALSIAMAHIPTAVYWTIRSIVACATQIASL 1089

Query: 737  IGLGHEYITSTT-EAWELSSLAHKVNNIHGHLRKQLALCYQHIDEK 871
              +GHEY  STT E WELS+LAHK+N+I  HL+KQL +CYQ+I+EK
Sbjct: 1090 TSMGHEYAISTTNETWELSTLAHKINSILDHLKKQLFICYQYIEEK 1135



 Score = 53.1 bits (126), Expect(2) = e-112
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +3

Query: 867  RRHIEAYQTLVRLFETIHIDNMKILRALIYAHDDL 971
            +R++E YQ L  LF++IHIDNMKIL+ALIYA DD+
Sbjct: 1135 KRNVETYQMLQNLFQSIHIDNMKILKALIYAKDDM 1169



 Score =  366 bits (940), Expect(2) = e-106
 Identities = 173/287 (60%), Positives = 231/287 (80%), Gaps = 1/287 (0%)
 Frame = +2

Query: 14  PLQQLIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLFNVVEDILQRATPGTEGLV 193
           PLQQLI+ DR + + SDD +M+KQI  THAPDGRE DVKPLF +VEDIL RATPG + L+
Sbjct: 82  PLQQLIKHDRSMITMSDDNIMVKQIHATHAPDGREFDVKPLFQLVEDILNRATPGVDPLI 141

Query: 194 HPTNQAQLDAFDDKTHHVDFLVMLEALAYTIHKISCEISCKCSGGGDAHATTLALFNSLS 373
               Q +++  DD+T+   F+ +LEAL++TI +ISCEI+ K  GGGDAHATTL++FN L+
Sbjct: 142 SAA-QTRIETSDDRTNQASFIALLEALSFTIDRISCEIAYKSLGGGDAHATTLSIFNLLT 200

Query: 374 SYSWDAKVVLALAAFGVSYGEFWLVAKLYPTNPLAKSIALLKQLPDILDHNESLRPRFDA 553
           SYSW+AK+VL L+AF V+YGEFWL+A++Y +N LAKS+A+LKQ+P IL+H+  L+PRFDA
Sbjct: 201 SYSWEAKLVLTLSAFAVNYGEFWLLAQIYSSNQLAKSMAILKQVPTILEHSGQLKPRFDA 260

Query: 554 LKNLIKEMLEVTQCIVEFKELPAQYINHETPVMSMALAHIPTAVYWTIRSVVACSSQIIG 733
           L NLI+ M+  T+CI+EFKELP+ YI+ + P ++ A+ HIPTAVYWTIRSVVAC++QI  
Sbjct: 261 LNNLIRAMVASTRCIIEFKELPSMYISQDVPALATAMTHIPTAVYWTIRSVVACATQITT 320

Query: 734 LIGLGHEY-ITSTTEAWELSSLAHKVNNIHGHLRKQLALCYQHIDEK 871
              +GHEY I++T EAWELS++AHK+N+I   L+KQL LCYQ+ID+K
Sbjct: 321 FTSMGHEYWISATNEAWELSTMAHKINSILDLLKKQLTLCYQYIDDK 367



 Score = 46.6 bits (109), Expect(2) = e-106
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = +3

Query: 867 RRHIEAYQTLVRLFETIHIDNMKILRALIYAHDDL 971
           +R+ E +Q L+ LF++IHIDNMKILRALI   DD+
Sbjct: 367 KRNAETFQMLLNLFDSIHIDNMKILRALISPKDDV 401


>ref|XP_002282172.1| PREDICTED: uncharacterized protein LOC100261038 [Vitis vinifera]
           gi|296081390|emb|CBI16823.3| unnamed protein product
           [Vitis vinifera]
          Length = 714

 Score =  373 bits (958), Expect(2) = e-111
 Identities = 184/287 (64%), Positives = 224/287 (78%), Gaps = 6/287 (2%)
 Frame = +2

Query: 35  GDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLFNVVEDILQRAT------PGTEGLVH 196
           GDR     SDD  +MKQI   H PDGR+ DVKPL  +VE+IL R T      P   G+  
Sbjct: 18  GDRMF--ASDDNGIMKQIHAIHVPDGRDFDVKPLLRIVENILLRTTSSTTLTPALPGIPL 75

Query: 197 PTNQAQLDAFDDKTHHVDFLVMLEALAYTIHKISCEISCKCSGGGDAHATTLALFNSLSS 376
            +NQAQLDA +DKT       M++ LA+TI+KISCEISCKC+ GGDAHAT +A+FN LSS
Sbjct: 76  GSNQAQLDALEDKTLQDGSSNMIDLLAHTINKISCEISCKCTSGGDAHATAVAVFNILSS 135

Query: 377 YSWDAKVVLALAAFGVSYGEFWLVAKLYPTNPLAKSIALLKQLPDILDHNESLRPRFDAL 556
           YSWDAKVVLALAAF  +YGEFWLVA LYPTNPLAKS+A+LKQLPDIL+H ++L+P+F+AL
Sbjct: 136 YSWDAKVVLALAAFATTYGEFWLVAHLYPTNPLAKSVAILKQLPDILEHTDALKPKFEAL 195

Query: 557 KNLIKEMLEVTQCIVEFKELPAQYINHETPVMSMALAHIPTAVYWTIRSVVACSSQIIGL 736
            +LIK M++V +CIV+FKELP QYI  +TP M  A+AHIPTAVYWTIRS+VAC+SQI  L
Sbjct: 196 SSLIKVMVDVAKCIVQFKELPPQYITPDTPAMVTAIAHIPTAVYWTIRSIVACASQIASL 255

Query: 737 IGLGHEYITSTTEAWELSSLAHKVNNIHGHLRKQLALCYQHIDEKTH 877
           IG+ HEYI ST +AWELS LAHKV+N++GHL+ QL LC QHI++K H
Sbjct: 256 IGMSHEYIASTMDAWELSGLAHKVSNMYGHLQSQLYLCQQHINDKKH 302



 Score = 57.0 bits (136), Expect(2) = e-111
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 867 RRHIEAYQTLVRLFETIHIDNMKILRALIYAHDD 968
           ++HIEAY  LVRLFET HIDNMKI+R LIYA DD
Sbjct: 300 KKHIEAYMMLVRLFETPHIDNMKIIRVLIYAKDD 333


>emb|CAN83922.1| hypothetical protein VITISV_026532 [Vitis vinifera]
          Length = 714

 Score =  373 bits (957), Expect(2) = e-111
 Identities = 184/287 (64%), Positives = 224/287 (78%), Gaps = 6/287 (2%)
 Frame = +2

Query: 35  GDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLFNVVEDILQRAT------PGTEGLVH 196
           GDR     SDD  +MKQI   H PDGR+ DVKPL  +VE+IL R T      P   G+  
Sbjct: 18  GDRMF--ASDDNGIMKQIHAIHVPDGRDFDVKPLLRIVENILLRTTSSTTLTPALPGIPL 75

Query: 197 PTNQAQLDAFDDKTHHVDFLVMLEALAYTIHKISCEISCKCSGGGDAHATTLALFNSLSS 376
            +NQAQLDA +DKT       M++ LA+TI+KISCEISCKC+ GGDAHAT +A+FN LSS
Sbjct: 76  GSNQAQLDALEDKTLQDGSSNMIDLLAHTINKISCEISCKCTSGGDAHATAVAVFNILSS 135

Query: 377 YSWDAKVVLALAAFGVSYGEFWLVAKLYPTNPLAKSIALLKQLPDILDHNESLRPRFDAL 556
           YSWDAKVVLALAAF  +YGEFWLVA LYPTNPLAKS+A+LKQLPDIL+H ++L+P+F+AL
Sbjct: 136 YSWDAKVVLALAAFATTYGEFWLVAHLYPTNPLAKSVAILKQLPDILEHTDALKPKFEAL 195

Query: 557 KNLIKEMLEVTQCIVEFKELPAQYINHETPVMSMALAHIPTAVYWTIRSVVACSSQIIGL 736
            +LIK M++V +CIV+FKELP QYI  +TP M  A+AHIPTAVYWTIRS+VAC+SQI  L
Sbjct: 196 SSLIKVMVDVAKCIVQFKELPPQYITPDTPAMVTAIAHIPTAVYWTIRSIVACASQIASL 255

Query: 737 IGLGHEYITSTTEAWELSSLAHKVNNIHGHLRKQLALCYQHIDEKTH 877
           IG+ HEYI ST +AWELS LAHKV+N++GHL+ QL LC QHI++K H
Sbjct: 256 IGMSHEYIASTMDAWELSGLAHKVSNMYGHLQXQLYLCQQHINDKKH 302



 Score = 57.0 bits (136), Expect(2) = e-111
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 867 RRHIEAYQTLVRLFETIHIDNMKILRALIYAHDD 968
           ++HIEAY  LVRLFET HIDNMKI+R LIYA DD
Sbjct: 300 KKHIEAYMMLVRLFETPHIDNMKIIRVLIYAKDD 333


>ref|XP_002526965.1| conserved hypothetical protein [Ricinus communis]
           gi|223533717|gb|EEF35452.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  377 bits (968), Expect(2) = e-111
 Identities = 179/294 (60%), Positives = 232/294 (78%), Gaps = 2/294 (0%)
 Frame = +2

Query: 2   QKSQPLQQLIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLFNVVEDILQRATPGT 181
           Q      QLI+GDR LFS+SD+  M KQI  TH+PDGRE DVKPL N+VEDI +RA P  
Sbjct: 103 QSPASAHQLIKGDRLLFSSSDENAMTKQIQATHSPDGREFDVKPLLNIVEDIFERAAPTI 162

Query: 182 EGLVHPT--NQAQLDAFDDKTHHVDFLVMLEALAYTIHKISCEISCKCSGGGDAHATTLA 355
           E L  P   +QA+ +  DDK +H   + MLE+L++ I +I+ EIS KCSGGGDAHATT++
Sbjct: 163 ESLALPAAGHQARPEVLDDKIYHSSSMAMLESLSFIIEQIASEISYKCSGGGDAHATTMS 222

Query: 356 LFNSLSSYSWDAKVVLALAAFGVSYGEFWLVAKLYPTNPLAKSIALLKQLPDILDHNESL 535
           + N LSSY+WDAK+V+ALAAF ++YGEFWLVA+   +N LAKS+A+LKQLPDIL+H+  L
Sbjct: 223 ILNMLSSYTWDAKLVIALAAFSMTYGEFWLVAQNCTSNQLAKSVAILKQLPDILEHSSML 282

Query: 536 RPRFDALKNLIKEMLEVTQCIVEFKELPAQYINHETPVMSMALAHIPTAVYWTIRSVVAC 715
           +PRFD++K+LIK ML + +CIVEF++LP +YI  + P +S A+AH+P +VYWTIRS+VAC
Sbjct: 283 KPRFDSVKSLIKVMLAIAKCIVEFQDLPPRYITMDVPALSTAMAHLPISVYWTIRSIVAC 342

Query: 716 SSQIIGLIGLGHEYITSTTEAWELSSLAHKVNNIHGHLRKQLALCYQHIDEKTH 877
           +SQIIGLIGL HE+I STTEAWELSSLAHK++N+  HL+ QL LCY+HIDE+ H
Sbjct: 343 ASQIIGLIGLAHEHIASTTEAWELSSLAHKLSNMQSHLQNQLGLCYKHIDERKH 396



 Score = 52.0 bits (123), Expect(2) = e-111
 Identities = 20/35 (57%), Positives = 29/35 (82%)
 Frame = +3

Query: 867 RRHIEAYQTLVRLFETIHIDNMKILRALIYAHDDL 971
           R+H+E YQ L+ LF+  HIDNM++L+ALIY+ DD+
Sbjct: 394 RKHMETYQNLIHLFDMAHIDNMRVLKALIYSKDDI 428


Top