BLASTX nr result

ID: Coptis21_contig00015387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015387
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264407.1| PREDICTED: transcription factor bHLH93-like ...   327   2e-87
gb|AFR78197.1| transcription factor bHLH [Vitis vinifera] gi|404...   326   5e-87
gb|AFH68208.1| transcription factor bHLH [Vitis amurensis] gi|38...   326   5e-87
emb|CBI19312.3| unnamed protein product [Vitis vinifera]              326   5e-87
ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Viti...   324   2e-86

>ref|XP_002264407.1| PREDICTED: transcription factor bHLH93-like [Vitis vinifera]
          Length = 331

 Score =  327 bits (839), Expect = 2e-87
 Identities = 165/249 (66%), Positives = 203/249 (81%), Gaps = 2/249 (0%)
 Frame = -1

Query: 900 EMNSLYQKRD-TLPFPFQEDIPLVTEYEEQCLLKDESHNLEEKGTICKVESTQVIETPTF 724
           E++S Y K D T PFP QE+ P + E E+  LL  + H LEE+ T CKVE  Q ++ P F
Sbjct: 82  EIDSSYHKNDGTPPFPIQEEYPSLVEDEDIGLLNSDLHGLEERNTSCKVEMEQAMDAPVF 141

Query: 723 SMGVCLDRKNKNKKVEGQPSKNLMAEXXXXXRLNDRLSMLRSVVPRISKMDRTSILGDTI 544
           ++G+C +RK + KK+EGQPSKNLMAE     RLNDRLSMLRS+VP+ISKMDRTSILGDTI
Sbjct: 142 NLGLCGERKARVKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTI 201

Query: 543 EYMKELLEKIKNLQDE-IEVGSNQLNLGAILKDLRTNEILVRNTPKFDVERRNMDTRVEI 367
           +YMKELLEKI  LQ+E IEVGS+Q NL  I K+L+ NE+LVRN+PKFDVERRNMDTR+EI
Sbjct: 202 DYMKELLEKINKLQEEEIEVGSDQTNLMGIFKELKPNEVLVRNSPKFDVERRNMDTRIEI 261

Query: 366 CCSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDFALQASCSEGLEKRGIVSSEVIKEALF 187
           CC++KPGLLLST++TLE  GLEIQQCVISCFNDF++QASCS+ +E++   +SE IK+ALF
Sbjct: 262 CCAAKPGLLLSTVNTLELLGLEIQQCVISCFNDFSMQASCSDVVEQQAETNSEDIKQALF 321

Query: 186 RNSGYGGRC 160
           RN+GYGGRC
Sbjct: 322 RNAGYGGRC 330


>gb|AFR78197.1| transcription factor bHLH [Vitis vinifera]
           gi|404551202|gb|AFR78198.1| transcription factor bHLH
           [Vitis vinifera]
          Length = 334

 Score =  326 bits (835), Expect = 5e-87
 Identities = 172/248 (69%), Positives = 200/248 (80%), Gaps = 3/248 (1%)
 Frame = -1

Query: 894 NSLYQKRDTLPFPFQEDIPLVTEYEEQCLLKD--ESHNLEEKGTICKVESTQVIETPTFS 721
           +S Y K+DT PFP QED P     EE+  +    + HN+  + T CKVE  Q  E P F+
Sbjct: 87  DSSYTKQDTPPFPTQEDYPFPMMEEEEPAVHPGVDLHNMGLQAT-CKVEPIQSTEFPVFN 145

Query: 720 MGVCLDRKNKN-KKVEGQPSKNLMAEXXXXXRLNDRLSMLRSVVPRISKMDRTSILGDTI 544
           +GVC + KNK  KKVEGQPSKNLMAE     RLNDRLSMLRSVVP+ISKMDRTSILGDTI
Sbjct: 146 VGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTI 205

Query: 543 EYMKELLEKIKNLQDEIEVGSNQLNLGAILKDLRTNEILVRNTPKFDVERRNMDTRVEIC 364
           +YMKELLE+I NLQ+E EV S+QLNL  I KDL+ NEI+VRN+PKFDVERRNMDTR+EIC
Sbjct: 206 DYMKELLERINNLQEENEVDSSQLNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEIC 265

Query: 363 CSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDFALQASCSEGLEKRGIVSSEVIKEALFR 184
           C+ KPGLLLST++TLEA GLEIQQCVISCFNDF++QASCSE LEKR +VSSE +K+ALFR
Sbjct: 266 CAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEKRTMVSSEELKQALFR 325

Query: 183 NSGYGGRC 160
           N+GYGGRC
Sbjct: 326 NAGYGGRC 333


>gb|AFH68208.1| transcription factor bHLH [Vitis amurensis]
           gi|384157483|gb|AFH68209.1| transcription factor bHLH
           [Vitis amurensis]
          Length = 334

 Score =  326 bits (835), Expect = 5e-87
 Identities = 172/248 (69%), Positives = 200/248 (80%), Gaps = 3/248 (1%)
 Frame = -1

Query: 894 NSLYQKRDTLPFPFQEDIPLVTEYEEQCLLKD--ESHNLEEKGTICKVESTQVIETPTFS 721
           +S Y K+DT PFP QED P     EE+  +    + HN+  + T CKVE  Q  E P F+
Sbjct: 87  DSSYTKQDTPPFPTQEDYPFPMMEEEEPAVHPGVDLHNMGLQAT-CKVEPIQSTEFPVFN 145

Query: 720 MGVCLDRKNKN-KKVEGQPSKNLMAEXXXXXRLNDRLSMLRSVVPRISKMDRTSILGDTI 544
           +GVC + KNK  KKVEGQPSKNLMAE     RLNDRLSMLRSVVP+ISKMDRTSILGDTI
Sbjct: 146 VGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTI 205

Query: 543 EYMKELLEKIKNLQDEIEVGSNQLNLGAILKDLRTNEILVRNTPKFDVERRNMDTRVEIC 364
           +YMKELLE+I NLQ+E EV S+QLNL  I KDL+ NEI+VRN+PKFDVERRNMDTR+EIC
Sbjct: 206 DYMKELLERINNLQEENEVDSSQLNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEIC 265

Query: 363 CSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDFALQASCSEGLEKRGIVSSEVIKEALFR 184
           C+ KPGLLLST++TLEA GLEIQQCVISCFNDF++QASCSE LEKR +VSSE +K+ALFR
Sbjct: 266 CAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEKRTMVSSEELKQALFR 325

Query: 183 NSGYGGRC 160
           N+GYGGRC
Sbjct: 326 NAGYGGRC 333


>emb|CBI19312.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  326 bits (835), Expect = 5e-87
 Identities = 172/251 (68%), Positives = 200/251 (79%), Gaps = 3/251 (1%)
 Frame = -1

Query: 903 PEMNSLYQKRDTLPFPFQEDIPLVTEYEEQCLLKD--ESHNLEEKGTICKVESTQVIETP 730
           P  +S Y K+DT PFP QED P     EE+  +    + HN+  + T CKVE  Q  E P
Sbjct: 45  PVTDSSYTKQDTPPFPTQEDYPFPMMEEEEPAVHPGVDLHNMGLQAT-CKVEPIQSTEFP 103

Query: 729 TFSMGVCLDRKNKN-KKVEGQPSKNLMAEXXXXXRLNDRLSMLRSVVPRISKMDRTSILG 553
            F++GVC + KNK  KKVEGQPSKNLMAE     RLNDRLSMLRSVVP+ISKMDRTSILG
Sbjct: 104 VFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILG 163

Query: 552 DTIEYMKELLEKIKNLQDEIEVGSNQLNLGAILKDLRTNEILVRNTPKFDVERRNMDTRV 373
           DTI+YMKELLE+I NLQ+E EV S+QLNL  I KDL+ NEI+VRN+PKFDVERRNMDTR+
Sbjct: 164 DTIDYMKELLERINNLQEENEVDSSQLNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRI 223

Query: 372 EICCSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDFALQASCSEGLEKRGIVSSEVIKEA 193
           EICC+ KPGLLLST++TLEA GLEIQQCVISCFNDF++QASCSE LEKR +VSSE +K+ 
Sbjct: 224 EICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEKRTMVSSEELKQT 283

Query: 192 LFRNSGYGGRC 160
           LFRN+GYGGRC
Sbjct: 284 LFRNAGYGGRC 294


>ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Vitis vinifera]
          Length = 334

 Score =  324 bits (831), Expect = 2e-86
 Identities = 171/248 (68%), Positives = 199/248 (80%), Gaps = 3/248 (1%)
 Frame = -1

Query: 894 NSLYQKRDTLPFPFQEDIPLVTEYEEQCLLKD--ESHNLEEKGTICKVESTQVIETPTFS 721
           +S Y K+DT PFP QED P     EE+  +    + HN+  + T CKVE  Q  E P F+
Sbjct: 87  DSSYTKQDTPPFPTQEDYPFPMMEEEEPAVHPGVDLHNMGLQAT-CKVEPIQSTEFPVFN 145

Query: 720 MGVCLDRKNKN-KKVEGQPSKNLMAEXXXXXRLNDRLSMLRSVVPRISKMDRTSILGDTI 544
           +GVC + KNK  KKVEGQPSKNLMAE     RLNDRLSMLRSVVP+ISKMDRTSILGDTI
Sbjct: 146 VGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTI 205

Query: 543 EYMKELLEKIKNLQDEIEVGSNQLNLGAILKDLRTNEILVRNTPKFDVERRNMDTRVEIC 364
           +YMKELLE+I NLQ+E EV S+QLNL  I KDL+ NEI+VRN+PKFDVERRNMDTR+EIC
Sbjct: 206 DYMKELLERINNLQEENEVDSSQLNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEIC 265

Query: 363 CSSKPGLLLSTLSTLEAFGLEIQQCVISCFNDFALQASCSEGLEKRGIVSSEVIKEALFR 184
           C+ KPGLLLST++TLEA GLEIQQCVISCFNDF++QASCSE LEKR +VSSE +K+ LFR
Sbjct: 266 CAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEKRTMVSSEELKQTLFR 325

Query: 183 NSGYGGRC 160
           N+GYGGRC
Sbjct: 326 NAGYGGRC 333


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