BLASTX nr result

ID: Coptis21_contig00015379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015379
         (1580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...   309   1e-81
ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794...   291   3e-76
ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|...   286   1e-74
ref|XP_004146209.1| PREDICTED: uncharacterized protein LOC101212...   278   4e-72
ref|NP_179349.2| polynucleotide adenylyltransferase-like protein...   276   8e-72

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 675

 Score =  309 bits (792), Expect = 1e-81
 Identities = 160/293 (54%), Positives = 211/293 (72%), Gaps = 1/293 (0%)
 Frame = -3

Query: 1575 KVQTVIPARVSFKEDCARILRGVRIAARLGLSFSKETAAAIQDLYMSILGMDKARVILEM 1396
            K++TVIPAR+SF+EDCARILRG+RIA RLGLS SK+T +AI+ L  S+  +DKAR+++E+
Sbjct: 216  KLRTVIPARLSFQEDCARILRGLRIAGRLGLSISKDTESAIRKLSSSVKSLDKARIMMEL 275

Query: 1395 DYMLSYGSAKSSLSLLNRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFA 1216
            +YMLSYG+A+S++ LL RF +L++ LPFHAAYLS +A +  + GS ML KLF ++D L +
Sbjct: 276  NYMLSYGAAESTIYLLQRFNLLELFLPFHAAYLSQQAGETFSLGSVMLMKLFFNLDTLVS 335

Query: 1215 CNRPSIPTVWVGVLAFHLALVNNPQDTLVILALSSIFYHGNWKEAVEFAREKSKTHVDFS 1036
            C+RP   ++WVG+LAFH ALV NPQD LV    +S+ YHG WK+ VEFARE +K  V F+
Sbjct: 336  CDRPCTSSLWVGLLAFHQALVTNPQDALVSWVFASVLYHGKWKDGVEFARENAKMQVKFA 395

Query: 1035 PEISESCSNKSDKALAEDVKQFASQVISSIDALTKPQSLFLSMERYPLYPCFGSVFISKH 856
            PEIS     KSD+ LAE+V   AS V  S+DAL    +L  SM R+ +    G VF+SK 
Sbjct: 396  PEISGFSEFKSDEELAEEVSHLASLVQDSVDALMDTDTLAQSMSRFGVTSSSGLVFVSKK 455

Query: 855  MGRTVAELFEVLLDDVDE-SQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTL 700
            +   VA+LF VL+DDV+     R  F IDY LL +GN  E RFVLGKVI++TL
Sbjct: 456  IANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHETRFVLGKVILETL 508


>ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794882 [Glycine max]
          Length = 714

 Score =  291 bits (746), Expect = 3e-76
 Identities = 168/432 (38%), Positives = 262/432 (60%), Gaps = 11/432 (2%)
 Frame = -3

Query: 1575 KVQTVIPARVSFKEDCARILRGVRIAARLGLSFSKETAAAIQDLYMSILGMDKARVILEM 1396
            K++TVIPA++SFKED  RILRG RIAARLGLS S+ET AA+      +  +DK ++++E+
Sbjct: 219  KLETVIPAQMSFKEDPGRILRGFRIAARLGLSLSRETEAAMWKYSSLVKSLDKNKIMIEL 278

Query: 1395 DYMLSYGSAKSSLSLLNRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFA 1216
            +YMLSYG+A+ SL LL +FK+L+ +LP HAAYL  +A  + A  S ML KLF  +D L A
Sbjct: 279  NYMLSYGAAEPSLHLLWKFKLLEFLLPVHAAYLDEQAIKEDAPASNMLMKLFFYLDNLVA 338

Query: 1215 CNRPSIPTVWVGVLAFHLALVNNPQDTLVILALSSIFYHGNWKEAVEFAREKSKTHVDFS 1036
            C+RP   T+WVG+LAFHL LVNNPQD LV+ A +S+ YHG W++ ++FA+E +K +V+F+
Sbjct: 339  CDRPCDCTLWVGLLAFHLTLVNNPQDALVVWAFASVLYHGEWEKGIKFAKEHAKMYVNFA 398

Query: 1035 PEISESCSNKSDKALAEDVKQFASQVISSIDALTKPQSLFLSMERYPLYPCFGSVFISKH 856
            PEI  S   KSD+ +A+ V + AS V+ SI AL +  SL  SM RYP +P    +F+ K 
Sbjct: 399  PEIRTSSIYKSDEEIAKAVTKLASLVMHSIPALVESNSLLQSMSRYPSFPQSDMIFVPKK 458

Query: 855  MGRTVAELFEVLLDDVD--ESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGSVSIH 682
             G+  + +F++L  DV+  +++ R   +I+Y +L +G+  EI FVLGK++++T+ S ++ 
Sbjct: 459  AGKLASAIFKMLASDVEFYKTERRKNSKINYGMLGKGHLSEIAFVLGKIVLETMSSGTVG 518

Query: 681  DQLQELQHLPLSHRDKQQKVIGEEMRKIPSRLNRRKVFENEKEHSPGC-NNNCQVGKEEK 505
            D  ++ +      + +  K I +   ++P  +N      N + H     N+ C+ GK +K
Sbjct: 519  DG-EDSEAGQCHLKTEGTKEIAQS--QLPDLVNHEVAAMNGEGHLLSIPNSECRQGKSKK 575

Query: 504  Q--------PSQKSNIGIISLSHLEHKRKVGSEETSCLMISHLEQRRVDGKKKDHLQNSN 349
            +          +K + G   LS     ++   E+   + +S    ++VD   +D L    
Sbjct: 576  RKLVKNRCIAKKKMSSGNQELSEKFEYKENKEEQQKLVKLS----QKVDMSTEDSLPKKK 631

Query: 348  TNKRKDVFEREK 313
             + RK +    K
Sbjct: 632  NDHRKQLISDRK 643


>ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|355513659|gb|AES95282.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 675

 Score =  286 bits (731), Expect = 1e-74
 Identities = 169/379 (44%), Positives = 235/379 (62%), Gaps = 17/379 (4%)
 Frame = -3

Query: 1575 KVQTVIPARVSFKEDCARILRGVRIAARLGLSFSKETAAAIQDLYMSILGMDKARVILEM 1396
            K++TVIPA++SFKED  RILRG RIAARLGLS S+E  AAI      +  ++K R+++EM
Sbjct: 185  KLETVIPAQISFKEDPGRILRGFRIAARLGLSLSREIEAAIWTCSSLVEDLNKDRMMIEM 244

Query: 1395 DYMLSYGSAKSSLSLLNRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFA 1216
            +YMLSYG+A+ SL LL +FK+L  +LP  AAYL  +A  + AQ S ML KLF  MD L  
Sbjct: 245  NYMLSYGAAEPSLRLLWKFKLLQFLLPVQAAYLDEQATKEDAQDSNMLMKLFFHMDNLVG 304

Query: 1215 CNRPSIPTVWVGVLAFHLALVNNPQDTLVILALSSIFYHGNWKEAVEFAREKSKTHVDFS 1036
            C RPS  T+W+G+LAFHLALVNNPQD LV+ A +S+ YHG+W+  ++FA+E +K  V+F 
Sbjct: 305  CGRPSDCTLWIGLLAFHLALVNNPQDALVVWAFASVLYHGDWEGGIKFAKEHAKMSVNFE 364

Query: 1035 PEISESCSNKSDKALAEDVKQFASQVISSIDALTKPQSLFLSMERYPLYPCFGSVF-ISK 859
            PEI  S   KSD+ +AE V + AS VI SI  L   +SL  S+ RYP  P    V  +SK
Sbjct: 365  PEIKRSSICKSDEDIAEAVTKLASLVIDSIHPLVNIESLSQSLSRYPSVPPPHMVLVVSK 424

Query: 858  HMGRTVAELFEVLLDDVD-ESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGSVSIH 682
              G+ V+E+FEVL++D+      R   +I+Y++L  G+  E RFVLGK+++ T+ S  I 
Sbjct: 425  KTGKAVSEIFEVLVNDIKFYKSERKSAKINYDMLGSGHTSETRFVLGKIVLQTMQSGIIG 484

Query: 681  DQ----LQELQHLPLSHRDKQQKVIGEEMRKI---------PSRLNRRKVFENE--KEHS 547
            D      ++        +D  Q V  E+ RK+         P +L ++K+ EN   +E  
Sbjct: 485  DADGFGTEKCHPDTEGTKDFGQLVTREDKRKVLSTPNLEHRPQKLKKQKLAENACIEEQK 544

Query: 546  PGCNNNCQVGKEEKQPSQK 490
             G +  C+  KE  +  QK
Sbjct: 545  TGLDEFCKY-KETNEEHQK 562


>ref|XP_004146209.1| PREDICTED: uncharacterized protein LOC101212579 [Cucumis sativus]
          Length = 810

 Score =  278 bits (710), Expect = 4e-72
 Identities = 202/552 (36%), Positives = 292/552 (52%), Gaps = 40/552 (7%)
 Frame = -3

Query: 1575 KVQTVIPARVSFKEDCARILRGVRIAARLGLSFSKETAAAIQDLYMSILGMDKARVILEM 1396
            K++T+IPA +SFK DCARILRG+RIAARLGLS SKET  AI     SI  +DK+R+++E+
Sbjct: 240  KLRTLIPASLSFKLDCARILRGLRIAARLGLSISKETETAIHKFSPSITSLDKSRLMMEL 299

Query: 1395 DYMLSYGSAKSSLSLLNRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFA 1216
            +YMLSYG+A  SL LL RFK+L  +LPFHAAYL  +  ++++  S ML KLF ++DKL +
Sbjct: 300  NYMLSYGAAVPSLYLLQRFKLLGSLLPFHAAYLDKQGIEKSSLSSVMLMKLFFNLDKLVS 359

Query: 1215 CNRPSIPTVWVGVLAFHLALVNNPQDTLVILALSSIFYHGNWKEAVEFAREKSKTHVDFS 1036
            C  PS   +WV +LAFHLALVNNPQ++LV+LA ++  YHG W E V +AREKS   ++  
Sbjct: 360  CAHPSNCNIWVALLAFHLALVNNPQNSLVVLAFAATLYHGEWNEGVNYAREKSLVEINLR 419

Query: 1035 PEISESCSNKSDKALAEDVKQFASQVISSIDALTKPQSLFLSMERYPLYPCFGSVFISKH 856
            PEI+ S   KS++ LAE V +FA +V   I ALT    L  +M  +P     G VF+S  
Sbjct: 420  PEITRSAKFKSEEKLAEGVTRFALKVQGCIAALTSKDCLLEAMSTFPASSNSGLVFVSNK 479

Query: 855  MGRTVAELFEVLLDDVDE-SQNRSCFEIDYELLKQGNH-GEIRFVLGKVIMDTL------ 700
              R VA +FEVL   V      +  F+IDY+ L +G    E R+VLGK+I++TL      
Sbjct: 480  TARDVAIIFEVLAKHVKSYKDEKKDFKIDYKRLGKGLFLRENRYVLGKIILETLEDAILQ 539

Query: 699  GSVSIHDQLQELQ---------HLPLSHRDKQQKVIG-EEMRKIPS------------RL 586
            G+ +I D+ Q L+           P++   ++Q V G +++RK PS            +L
Sbjct: 540  GNENIPDRNQNLRIDAPTKETSDSPVADLVQEQLVKGNKKVRKRPSVSEVELKANKKYKL 599

Query: 585  NRRKVFENEKEHSPG-CNNNCQVGKEEKQPSQKSNIGIISLSHLEHKRKVGSEETSCLMI 409
             R++   ++K    G C N  ++ K+  + SQ      + L+ +E   +   E   C   
Sbjct: 600  VRKEGSISDKVVENGRCINMTEMYKKGVEGSQ------LPLAPMEESMEPILESRKC--- 650

Query: 408  SHLEQRRVDGKKKDHLQNSNTNKR---KDVFER------EKDGSNXXXXXXXXXXXXXXX 256
             HLE R  +  +++     N  K+   K  F++           N               
Sbjct: 651  HHLEVRATENMRENPESMGNEVKKIIPKKAFQKVTKELLHPVEINPRKMDKVAGQEVKSE 710

Query: 255  XXXXSHVEQSTEEVKKDNSFLISSHPVQERDMAETDCPQNSNTRKLLKVFERCQMYSSKQ 76
                  V Q  + +KK           + RD+ +T      N RK+ KV E         
Sbjct: 711  KKEHHRVSQGKKNIKK-----------KRRDITDT---VEINPRKMDKVAE--------- 747

Query: 75   KQQVVKENKHHQ 40
             Q  +K+N+HHQ
Sbjct: 748  -QGKLKKNEHHQ 758


>ref|NP_179349.2| polynucleotide adenylyltransferase-like protein [Arabidopsis
            thaliana] gi|330251561|gb|AEC06655.1| polynucleotide
            adenylyltransferase-like protein [Arabidopsis thaliana]
          Length = 757

 Score =  276 bits (707), Expect = 8e-72
 Identities = 175/521 (33%), Positives = 284/521 (54%), Gaps = 12/521 (2%)
 Frame = -3

Query: 1575 KVQTVIPARVSFKEDCARILRGVRIAARLGLSFSKETAAAIQDLYMSILGMDKARVILEM 1396
            K++T++PA +SFKEDCARILRG+RIAARLGLS SK+   AI +   S+  +D+ R+I+EM
Sbjct: 235  KLRTLVPAHLSFKEDCARILRGLRIAARLGLSLSKDVKTAIPEFVSSVANLDQFRLIMEM 294

Query: 1395 DYMLSYGSAKSSLSLLNRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFA 1216
            +YML+YG+A  S+ LL +FK+L ++LPF AAYL  +A   +   S ML +LF++MDKL +
Sbjct: 295  NYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYLD-QASKTSLSSSLMLVRLFSNMDKLVS 353

Query: 1215 CNRPSIPTVWVGVLAFHLALVNNPQDTLVILALSSIFYHGNWKEAVEFAREKSKTHVDFS 1036
            C++P+ P +W+ VLAFH+ALV NPQ+ +V+ A +++ YHGNW +AVEFARE   + + ++
Sbjct: 354  CDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYHGNWSKAVEFAREHETSVIGYA 413

Query: 1035 PEISESCSNKSDKALAEDVKQFASQVISSIDALTKPQSLFLSMERYPLYPCFGSVFISKH 856
            PE+S+S   +SD+ LAE V +F   +  +   LT  ++L  ++  YP +   G VFI K 
Sbjct: 414  PEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYLYPDFKFSGLVFIPKK 473

Query: 855  MGRTVAELFEVLLDDVDESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGSVSIHDQ 676
             GR VAE F  L D       +  F IDY LL +GN  E+RFVLGK+I+DT+   ++ + 
Sbjct: 474  KGRDVAEGFMRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITEGTVIEP 533

Query: 675  LQELQH--------LPLSHRDKQQKVIGEEMRKIPSRLNRRKVFENEKEHSPGCNNNCQV 520
            L  ++         +P +  +K+ ++   +  K  +  N+  V      H    ++  ++
Sbjct: 534  LNSVKKKQSTRNHIVPAACLEKKDELFVSKSSKEDNN-NQTPV------HDSNASSVLKI 586

Query: 519  GKEEKQPSQKSNIGIISLSHLEHKRKVGSEETSCLMISHLEQRRVDGKKKDHLQNSNTNK 340
             K  ++ S+++N     +          +++ S  ++  L++RR             T+K
Sbjct: 587  LKRTREDSEQNNDQETEVCPRTPSGPAKNQDQS--VVQMLKRRRSKEAPVSEPPKQKTSK 644

Query: 339  RKDVFEREKDGSNXXXXXXXXXXXXXXXXXXXSHV---EQSTEEVKKDNSFLISSHPVQE 169
            R    ++E  GS                      +   + S    K+      +  PV+E
Sbjct: 645  RSRSDDQEAVGSLSVPAKIQHQSNKHDTNAPICELPKQKTSKNHSKESRKVKHNDLPVKE 704

Query: 168  RDMAETDCPQNSNTRKLLKVFER-CQMYSSKQKQQVVKENK 49
               A+     + +   LL+V E+  Q  SSK++   +   K
Sbjct: 705  IKEAKQGFVSDKSMSDLLQVLEKSSQQVSSKEENNSLSSEK 745


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