BLASTX nr result

ID: Coptis21_contig00015377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015377
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528608.1| conserved hypothetical protein [Ricinus comm...    49   3e-07
ref|XP_002303165.1| predicted protein [Populus trichocarpa] gi|2...    46   2e-06
gb|ABK95138.1| unknown [Populus trichocarpa]                           47   3e-06
ref|XP_002298181.1| predicted protein [Populus trichocarpa] gi|2...    47   3e-06
ref|XP_003547556.1| PREDICTED: uncharacterized protein LOC100791...    48   4e-06

>ref|XP_002528608.1| conserved hypothetical protein [Ricinus communis]
           gi|223531953|gb|EEF33766.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score = 49.3 bits (116), Expect(2) = 3e-07
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   GSSAGAIACVVIASGSSMKEALEATKVLA 87
           GSSAGAI C VIASG+SM EALEATKVLA
Sbjct: 190 GSSAGAIVCAVIASGASMHEALEATKVLA 218



 Score = 30.0 bits (66), Expect(2) = 3e-07
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 89  DCRLRGTAFRLGVYI 133
           DCRLRGTAFRLG  +
Sbjct: 220 DCRLRGTAFRLGAVL 234


>ref|XP_002303165.1| predicted protein [Populus trichocarpa] gi|222840597|gb|EEE78144.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 46.2 bits (108), Expect(2) = 2e-06
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +1

Query: 1   GSSAGAIACVVIASGSSMKEALEATKVLA 87
           GSSAGAI C VIASG+ M+EAL ATKVLA
Sbjct: 164 GSSAGAIVCAVIASGAGMQEALTATKVLA 192



 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 89  DCRLRGTAFRLGVYI 133
           DCRLRGTAFRLG  +
Sbjct: 194 DCRLRGTAFRLGAVL 208


>gb|ABK95138.1| unknown [Populus trichocarpa]
          Length = 416

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +1

Query: 1   GSSAGAIACVVIASGSSMKEALEATKVLA 87
           GSSAGAI C VIASG+SM EAL ATKVLA
Sbjct: 198 GSSAGAIVCAVIASGASMHEALTATKVLA 226



 Score = 28.9 bits (63), Expect(2) = 3e-06
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 89  DCRLRGTAFRLGVYI 133
           DCRL+GTAFRLG  +
Sbjct: 228 DCRLKGTAFRLGAVL 242


>ref|XP_002298181.1| predicted protein [Populus trichocarpa] gi|222845439|gb|EEE82986.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +1

Query: 1   GSSAGAIACVVIASGSSMKEALEATKVLA 87
           GSSAGAI C VIASG+SM EAL ATKVLA
Sbjct: 150 GSSAGAIVCAVIASGASMHEALTATKVLA 178



 Score = 28.9 bits (63), Expect(2) = 3e-06
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 89  DCRLRGTAFRLGVYI 133
           DCRL+GTAFRLG  +
Sbjct: 180 DCRLKGTAFRLGAVL 194


>ref|XP_003547556.1| PREDICTED: uncharacterized protein LOC100791724 [Glycine max]
          Length = 383

 Score = 47.8 bits (112), Expect(2) = 4e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   GSSAGAIACVVIASGSSMKEALEATKVLA 87
           GSSAGAI C VIASG+SM+EAL ATK+LA
Sbjct: 167 GSSAGAIVCAVIASGASMEEALNATKILA 195



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = +2

Query: 89  DCRLRGTAFRLGVYI--ILD 142
           DCR RGTAFRLG  +  ILD
Sbjct: 197 DCRNRGTAFRLGAVLRDILD 216


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