BLASTX nr result

ID: Coptis21_contig00015365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015365
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 55/157 (35%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
 Frame = +3

Query: 36  YKTKIRDFINFVDRVMILRD-SNINKFHINSCEDLDGGHIFTWIIGALGRHAQQLCI--- 203
           +K K + F+N V+RV++LRD SNI KF + SC   D     TW+  A+ R+ ++LC+   
Sbjct: 87  FKAKRKIFMNSVERVLLLRDSSNIEKFTL-SCGIDDATRTRTWVSAAVNRNVKELCVNFY 145

Query: 204 KSTIAESLELPYDLFT-SNIKEMDLCFPWIIAPQLPSSMCTAARIKSLVLHTVLLPNANS 380
           +   +ES   P  LFT + + ++ +    ++  +L SS+     +K L L  V+ P+ +S
Sbjct: 146 EGGESESFVSPLCLFTCATLTKLKITSHGVL--RLSSSISLPC-LKILSLQHVVFPDEDS 202

Query: 381 NGELILSCLVLEKLAMTYCDLKHIKILTVSAPLLEKL 491
             + IL+   LEKL ++Y D K++K +T+SAP L  L
Sbjct: 203 T-QQILNLRTLEKLKISYYDWKNLKAITISAPKLRSL 238


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
 Frame = +3

Query: 57  FINFVDRVMILRD-SNINKFHINSCEDLDG-GHIFTWIIGALGRHAQQLCIKSTIAE-SL 227
           F++FVDRV+ LR  SNI +F++ SCE  D    + TWI  A+ R+ + L ++    E S 
Sbjct: 81  FMDFVDRVLALRGPSNIVQFYL-SCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASF 139

Query: 228 ELPYDLFT-SNIKEMDLCFPWIIAPQLPSSMCTAARIKSLVLHTVLLPNANSNGELILSC 404
            LP+ LF    + E+++  P+I+  +LPSS+  +  +K L L+ V+  + +S  +L  S 
Sbjct: 140 VLPHCLFNCETLTELEINMPYIL--KLPSSISLSC-LKILNLYEVIFTDDHSTQQL-FSL 195

Query: 405 LVLEKLAMTYCDLKHIKILTVSAPLLEKL 491
             L +L +  C+  ++  +++SAP L+ L
Sbjct: 196 PNLVELEIHECNWMNLVAVSISAPKLQSL 224


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