BLASTX nr result

ID: Coptis21_contig00015341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015341
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]   100   3e-26
ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262...   100   4e-26
emb|CBI40456.3| unnamed protein product [Vitis vinifera]              100   4e-26
ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-25
ref|XP_004159777.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    95   8e-25

>emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]
          Length = 1040

 Score =  100 bits (250), Expect(2) = 3e-26
 Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 PGSVMEKSGVGSEFGVVRDRGELVSFKEIGGLDFGDGIRFEPSKLLDKF*KEATT*LNL- 136
           PG +MEKSG   +  +    G+L   K+IGGLDFG+GIRFEPSKLL KF KEA   +NL 
Sbjct: 66  PGLIMEKSGESLK-NMENGYGDLSFIKKIGGLDFGEGIRFEPSKLLQKFQKEADE-VNLS 123

Query: 135 --SRPLVRSGVRKSQLALVFADLLVEPGKLLMVSVAVSLQEIGYAIE 1
             SR   R G RK QLALVF DLLV+P +LLMV+VA +L E+GY I+
Sbjct: 124 SASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQ 170



 Score = 42.4 bits (98), Expect(2) = 3e-26
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = -2

Query: 409 SRFLMFEKVDYLQWICIVAVFFLCCCFSSNVFTWFSNGEI 290
           SRFL F K+DYLQW+C VAVF    CF   +F  F  G I
Sbjct: 34  SRFLFFGKLDYLQWVCTVAVF----CFFVVLFQMFLPGLI 69


>ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262009 [Vitis vinifera]
          Length = 1026

 Score =  100 bits (249), Expect(2) = 4e-26
 Identities = 62/107 (57%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 PGSVMEKSGVGSEFGVVRDRGELVSFKEIGGLDFGDGIRFEPSKLLDKF*KEATT*LNL- 136
           PG +MEKSG   +  +    G+L   K IGGLDFG+GIRFEPSKLL KF KEA   +NL 
Sbjct: 66  PGLIMEKSGESLK-NMENGYGDLSFIKNIGGLDFGEGIRFEPSKLLQKFQKEADE-VNLS 123

Query: 135 --SRPLVRSGVRKSQLALVFADLLVEPGKLLMVSVAVSLQEIGYAIE 1
             SR   R G RK QLALVF DLLV+P +LLMV+VA +L E+GY I+
Sbjct: 124 SASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQ 170



 Score = 42.4 bits (98), Expect(2) = 4e-26
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = -2

Query: 409 SRFLMFEKVDYLQWICIVAVFFLCCCFSSNVFTWFSNGEI 290
           SRFL F K+DYLQW+C VAVF    CF   +F  F  G I
Sbjct: 34  SRFLFFGKLDYLQWVCTVAVF----CFFVVLFQMFLPGLI 69


>emb|CBI40456.3| unnamed protein product [Vitis vinifera]
          Length = 1026

 Score =  100 bits (249), Expect(2) = 4e-26
 Identities = 62/107 (57%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 PGSVMEKSGVGSEFGVVRDRGELVSFKEIGGLDFGDGIRFEPSKLLDKF*KEATT*LNL- 136
           PG +MEKSG   +  +    G+L   K IGGLDFG+GIRFEPSKLL KF KEA   +NL 
Sbjct: 66  PGLIMEKSGESLK-NMENGYGDLSFIKNIGGLDFGEGIRFEPSKLLQKFQKEADE-VNLS 123

Query: 135 --SRPLVRSGVRKSQLALVFADLLVEPGKLLMVSVAVSLQEIGYAIE 1
             SR   R G RK QLALVF DLLV+P +LLMV+VA +L E+GY I+
Sbjct: 124 SASRLRHRFGYRKPQLALVFPDLLVDPQQLLMVTVASALLEMGYTIQ 170



 Score = 42.4 bits (98), Expect(2) = 4e-26
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = -2

Query: 409 SRFLMFEKVDYLQWICIVAVFFLCCCFSSNVFTWFSNGEI 290
           SRFL F K+DYLQW+C VAVF    CF   +F  F  G I
Sbjct: 34  SRFLFFGKLDYLQWVCTVAVF----CFFVVLFQMFLPGLI 69


>ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|222843112|gb|EEE80659.1|
           predicted protein [Populus trichocarpa]
          Length = 990

 Score = 99.0 bits (245), Expect(2) = 3e-25
 Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 5/108 (4%)
 Frame = -3

Query: 312 PGSVMEKSGVGSE--FGVVRDRGELVSFKEIGGLDFGDGIRFEPSKLLDKF*KEATT*LN 139
           PGSV+EKS +GS    G+     +L+  KEIGGLDFG+ I+FEPSK+L KF KE    +N
Sbjct: 73  PGSVVEKSELGSSPWRGMELVNKDLLYLKEIGGLDFGEDIKFEPSKILQKFRKENRE-MN 131

Query: 138 L---SRPLVRSGVRKSQLALVFADLLVEPGKLLMVSVAVSLQEIGYAI 4
           +   +  L R   RK QLALVFADLLV+P +LLMV+VA +LQEIGY I
Sbjct: 132 MPFTNGTLSRFPYRKPQLALVFADLLVDPQQLLMVTVATALQEIGYTI 179



 Score = 41.2 bits (95), Expect(2) = 3e-25
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -2

Query: 409 SRFLMFEKVDYLQWICIVAVF 347
           SRFL+F+K+DY+QWIC VAVF
Sbjct: 41  SRFLLFKKLDYIQWICTVAVF 61


>ref|XP_004159777.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212216
           [Cucumis sativus]
          Length = 1037

 Score = 94.7 bits (234), Expect(2) = 8e-25
 Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
 Frame = -3

Query: 312 PGSVMEKSGVGSEFGVVRDRGELVSFKEIGGLDFGDGIRFEPSKLLDKF*KEA--TT*LN 139
           PGSV+EKS V  +  V +  G+L   KE+G LDFG+ IRFEPSKLL KF KEA      +
Sbjct: 70  PGSVVEKSEVALK-DVEKSLGDLKFLKELGMLDFGEDIRFEPSKLLGKFKKEAREADFSS 128

Query: 138 LSRPLVRSGVRKSQLALVFADLLVEPGKLLMVSVAVSLQEIGYAIE 1
            +R   R G RK QLALVF+DLLV+  ++LMV++A +LQEIGY  +
Sbjct: 129 FNRTRSRFGYRKPQLALVFSDLLVDSYQVLMVTIASALQEIGYVFQ 174



 Score = 43.9 bits (102), Expect(2) = 8e-25
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -2

Query: 409 SRFLMFEKVDYLQWICIVAVFF 344
           SRFL F K+DYLQWIC VAVFF
Sbjct: 38  SRFLFFRKIDYLQWICTVAVFF 59