BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015311
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   266   5e-69
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   261   1e-67
ref|XP_003611125.1| General transcription factor IIE subunit [Me...   252   8e-65
ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   252   1e-64
gb|AFK38914.1| unknown [Lotus japonicus]                              251   2e-64

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  266 bits (680), Expect = 5e-69
 Identities = 130/156 (83%), Positives = 144/156 (92%)
 Frame = +2

Query: 2   GKYFSYKSKHDLKNKEDLLRLVRKFPEGIAVIDLKDAYTTIMEDLQAMKAGGLIWLLSNF 181
           GK F+YKSKHDLK++  LL LVRKFPEGIAVIDLKD+Y ++MEDLQA+KA G +WLLSNF
Sbjct: 123 GKRFAYKSKHDLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLSNF 182

Query: 182 DSQEDIAYPNDPRVLLKVDDDLKQFFRGIELPRDMIDIEKDLQKNGMKPATNTARRRAMA 361
           DSQEDIAYPNDPRV +KVDDDLKQFFR IELPRDM+DIEKDLQKNGMKPATNTA+RRAMA
Sbjct: 183 DSQEDIAYPNDPRVPIKVDDDLKQFFRTIELPRDMLDIEKDLQKNGMKPATNTAKRRAMA 242

Query: 362 QVHGIAPKSKAKKKQRDISKRTKLTNAHLPELFRNL 469
           QVHGIA KSK KKK+ +ISKRTKLTNAHLPELF+NL
Sbjct: 243 QVHGIASKSKPKKKKHEISKRTKLTNAHLPELFQNL 278


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  261 bits (668), Expect = 1e-67
 Identities = 127/156 (81%), Positives = 143/156 (91%)
 Frame = +2

Query: 2   GKYFSYKSKHDLKNKEDLLRLVRKFPEGIAVIDLKDAYTTIMEDLQAMKAGGLIWLLSNF 181
           GK FSYKSKHDLK+K  LL L+RKFPEGIAVIDLKD+Y ++M+DLQA+KA G IWLLSNF
Sbjct: 127 GKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQIWLLSNF 186

Query: 182 DSQEDIAYPNDPRVLLKVDDDLKQFFRGIELPRDMIDIEKDLQKNGMKPATNTARRRAMA 361
           DSQEDIAYPNDPR+++KVDDDLKQ FRGIELPRDM+DIEKDLQKNGMKPATNTA+RRA A
Sbjct: 187 DSQEDIAYPNDPRMVIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRAAA 246

Query: 362 QVHGIAPKSKAKKKQRDISKRTKLTNAHLPELFRNL 469
           QV GI+ K KAKKK+ +ISKRTKLTNAHLPELF+NL
Sbjct: 247 QVQGISTKQKAKKKKHEISKRTKLTNAHLPELFKNL 282


>ref|XP_003611125.1| General transcription factor IIE subunit [Medicago truncatula]
           gi|355512460|gb|AES94083.1| General transcription factor
           IIE subunit [Medicago truncatula]
           gi|388501522|gb|AFK38827.1| unknown [Medicago
           truncatula]
          Length = 270

 Score =  252 bits (644), Expect = 8e-65
 Identities = 122/157 (77%), Positives = 142/157 (90%)
 Frame = +2

Query: 2   GKYFSYKSKHDLKNKEDLLRLVRKFPEGIAVIDLKDAYTTIMEDLQAMKAGGLIWLLSNF 181
           G+ FSYKSKH L++K++LL L+RKFPEGIAVIDLKD+Y T+MEDLQA+K G  IWLLSNF
Sbjct: 112 GERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNF 171

Query: 182 DSQEDIAYPNDPRVLLKVDDDLKQFFRGIELPRDMIDIEKDLQKNGMKPATNTARRRAMA 361
           DSQEDIAYPNDP+V +KVDDDLKQ FRGIELPRDMIDIE+DLQKNGMKPATNTA+RR+ A
Sbjct: 172 DSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAA 231

Query: 362 QVHGIAPKSKAKKKQRDISKRTKLTNAHLPELFRNLN 472
           Q+ GI+ K K KKK+ +I+KRTKLTNAHLPELF+NLN
Sbjct: 232 QMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLN 268


>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 279

 Score =  252 bits (643), Expect = 1e-64
 Identities = 122/157 (77%), Positives = 141/157 (89%)
 Frame = +2

Query: 2   GKYFSYKSKHDLKNKEDLLRLVRKFPEGIAVIDLKDAYTTIMEDLQAMKAGGLIWLLSNF 181
           G+ FSYKSK+ LK+K +LL+L+RK+PEG+AVIDLKDAY T+MEDLQA+KA G IWLLSNF
Sbjct: 121 GQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNF 180

Query: 182 DSQEDIAYPNDPRVLLKVDDDLKQFFRGIELPRDMIDIEKDLQKNGMKPATNTARRRAMA 361
           DSQEDIAYPNDP+V +KVDDDLKQ FR IELPRDMIDIEKDLQKNGMKPATNTA+RR+ A
Sbjct: 181 DSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAQRRSAA 240

Query: 362 QVHGIAPKSKAKKKQRDISKRTKLTNAHLPELFRNLN 472
           Q+ GI+ K K KKK+ +ISKRTKLTNAHLPELF+ LN
Sbjct: 241 QIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQTLN 277


>gb|AFK38914.1| unknown [Lotus japonicus]
          Length = 278

 Score =  251 bits (641), Expect = 2e-64
 Identities = 121/156 (77%), Positives = 142/156 (91%)
 Frame = +2

Query: 2   GKYFSYKSKHDLKNKEDLLRLVRKFPEGIAVIDLKDAYTTIMEDLQAMKAGGLIWLLSNF 181
           G+ FSYKSKHDL++K++LL L+RKFPEGIAVIDLKD+Y T++EDLQA+KA   IWLLSNF
Sbjct: 120 GEKFSYKSKHDLRDKKELLFLIRKFPEGIAVIDLKDSYPTVLEDLQALKAAREIWLLSNF 179

Query: 182 DSQEDIAYPNDPRVLLKVDDDLKQFFRGIELPRDMIDIEKDLQKNGMKPATNTARRRAMA 361
           DSQEDIAYPNDP+V +KVDDDLKQ FRGIELPRDMIDIE+DLQKNGMKPATNTA+RR+ A
Sbjct: 180 DSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAA 239

Query: 362 QVHGIAPKSKAKKKQRDISKRTKLTNAHLPELFRNL 469
           Q+ GI+ K K KKK+ +I+KRTKLTNAHLPELF+NL
Sbjct: 240 QMQGISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 275