BLASTX nr result

ID: Coptis21_contig00015306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015306
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325450.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|XP_002524051.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002269622.2| PREDICTED: uncharacterized protein LOC100247...   145   4e-33
emb|CAN62200.1| hypothetical protein VITISV_032475 [Vitis vinifera]   143   2e-32
ref|XP_002454071.1| hypothetical protein SORBIDRAFT_04g024180 [S...   138   4e-31

>ref|XP_002325450.1| predicted protein [Populus trichocarpa] gi|222862325|gb|EEE99831.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/121 (62%), Positives = 93/121 (76%)
 Frame = -2

Query: 363 ASTSLKGNGTPNEKKRSGACASHSNMYSFTQDEDACYSCLSGMSEGMVEVKRPPTSPMLK 184
           AS SLKGN   ++++RS  C  HSNMYSFTQD+D CY+C+ G +EG+ ++K      ML 
Sbjct: 56  ASNSLKGNVKSSDRRRSPRCNMHSNMYSFTQDDDGCYNCIPG-NEGIADMKHQSNDQMLS 114

Query: 183 ETDPTLPLVVIPASGANRENGVMWASSPDRLEMPRKPFHHSNSSDSPCVSESGSDIFSKR 4
           E+D  LPLV +PA+   +ENGVMW SSPDRLE+P KPFH+SN SDSPCVSESGSDIFSKR
Sbjct: 115 ESDVGLPLVTVPAAEFTKENGVMWVSSPDRLELPPKPFHNSNCSDSPCVSESGSDIFSKR 174

Query: 3   E 1
           E
Sbjct: 175 E 175


>ref|XP_002524051.1| conserved hypothetical protein [Ricinus communis]
           gi|223536778|gb|EEF38419.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score =  160 bits (404), Expect = 1e-37
 Identities = 72/121 (59%), Positives = 93/121 (76%)
 Frame = -2

Query: 363 ASTSLKGNGTPNEKKRSGACASHSNMYSFTQDEDACYSCLSGMSEGMVEVKRPPTSPMLK 184
           +S  +KGN   ++++R+G C  HSN +SFTQD+D CY+C+SG +EG+ ++K  P+  ML 
Sbjct: 56  SSNIMKGNEKSSDRRRTGGCHMHSNTFSFTQDDDGCYNCISG-NEGIGDLKHQPSDQMLS 114

Query: 183 ETDPTLPLVVIPASGANRENGVMWASSPDRLEMPRKPFHHSNSSDSPCVSESGSDIFSKR 4
           E+D  LPLV +P     +ENG+MW SSPDRLE+P KPFHHSN SDSPCVSESGSDIFSKR
Sbjct: 115 ESDVPLPLVTVPGPKFTKENGIMWVSSPDRLELPPKPFHHSNCSDSPCVSESGSDIFSKR 174

Query: 3   E 1
           E
Sbjct: 175 E 175


>ref|XP_002269622.2| PREDICTED: uncharacterized protein LOC100247776 [Vitis vinifera]
           gi|297737261|emb|CBI26462.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/115 (59%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 NGTPNEKKRSGACASHSNMYSFTQDEDACYSCLSGMSEGMVEVKR-PPTSPMLKETDPTL 166
           +G   ++ +SGAC  HSN YSFT+++++C+ C+SG SEG+++V    P   +L E+D  L
Sbjct: 58  SGKSADRNKSGACRLHSNAYSFTREDNSCFHCVSG-SEGILDVNHHQPNGQILTESDVAL 116

Query: 165 PLVVIPASGANRENGVMWASSPDRLEMPRKPFHHSNSSDSPCVSESGSDIFSKRE 1
           PLV++PA    +ENGV+WASSP+RLE+P KPFHHSN SDSPCVSESGSDIFSKRE
Sbjct: 117 PLVMVPAPEYTKENGVVWASSPERLELPPKPFHHSNCSDSPCVSESGSDIFSKRE 171


>emb|CAN62200.1| hypothetical protein VITISV_032475 [Vitis vinifera]
          Length = 570

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/115 (58%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 NGTPNEKKRSGACASHSNMYSFTQDEDACYSCLSGMSEGMVEVKR-PPTSPMLKETDPTL 166
           +G   ++ +SGAC  HSN YSFT+++++C+ C+SG SEG+++V    P   +L E+D  L
Sbjct: 290 SGKSADRNKSGACRLHSNAYSFTREDNSCFHCVSG-SEGILDVNHHQPNGQILTESDVAL 348

Query: 165 PLVVIPASGANRENGVMWASSPDRLEMPRKPFHHSNSSDSPCVSESGSDIFSKRE 1
           PLV++PA    +ENGV+W SSP+RLE+P KPFHHSN SDSPCVSESGSDIFSKRE
Sbjct: 349 PLVMVPAPEYTKENGVVWXSSPERLELPPKPFHHSNCSDSPCVSESGSDIFSKRE 403


>ref|XP_002454071.1| hypothetical protein SORBIDRAFT_04g024180 [Sorghum bicolor]
           gi|241933902|gb|EES07047.1| hypothetical protein
           SORBIDRAFT_04g024180 [Sorghum bicolor]
          Length = 341

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/115 (60%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 NGTPNEKKRSGACASHSNMYSFTQDEDACYSCLSGMSEGMVEVKRPPTSPMLKETDPTLP 163
           N T   K+RS AC  HS++Y F  D+  CY C+SG+S G VEVK+ P SP+ K  + +LP
Sbjct: 56  NNTSKAKRRSEACELHSDLYRFG-DQTGCYYCMSGLSNGGVEVKQAPASPVPKSVESSLP 114

Query: 162 LVVIPASGANREN-GVMWASSPDRLEMPRKPFHHSNSSDSPCVSESGSDIFSKRE 1
           LV IP   +++EN GVMW SSPDRLE PR+PF +SNSS SPCVSESGSDI+SKRE
Sbjct: 115 LVKIPTPESSKENSGVMWISSPDRLEDPRRPFQYSNSSGSPCVSESGSDIYSKRE 169


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