BLASTX nr result

ID: Coptis21_contig00015301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015301
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT78693.1| mixta-like2 MYB transcription factor [Thalictrum ...   481   e-133
gb|ACN69972.1| MYB transcription factor ML2 [Thalictrum thalictr...   478   e-132
gb|ACT78694.1| mixta-like2 MYB transcription factor [Thalictrum ...   475   e-131
ref|XP_002283843.1| PREDICTED: uncharacterized protein LOC100245...   384   e-104
ref|XP_002323871.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103

>gb|ACT78693.1| mixta-like2 MYB transcription factor [Thalictrum dioicum]
          Length = 392

 Score =  481 bits (1239), Expect = e-133
 Identities = 254/365 (69%), Positives = 280/365 (76%), Gaps = 18/365 (4%)
 Frame = -1

Query: 1258 ALPTKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 1079
            ALP+KAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK
Sbjct: 31   ALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 90

Query: 1078 RTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLE 899
            RTDNEIKNYWNTHLKKRL+KLGIDPVTHKPKSDALSS++GQTK+DSNLSHMAQWESARLE
Sbjct: 91   RTDNEIKNYWNTHLKKRLSKLGIDPVTHKPKSDALSSINGQTKADSNLSHMAQWESARLE 150

Query: 898  AEARLVRESKLRSNSFIQQLGLSGSGTGMDQGHLHLSKGTTSSTQPHCLDILKAWQGAWS 719
            AEARLVRESKLRS S   QLGLS SG    Q    L+K T++STQP CLD++K WQG WS
Sbjct: 151  AEARLVRESKLRSTSMNNQLGLSSSGVDPGQ---QLNKATSTSTQPQCLDVMKTWQGIWS 207

Query: 718  NSTKCGAVAGGGSSGH-DLESPTSTLCFSENSMPIANVGFSDRNLSSVDLIHN------- 563
              TKCG + G GS+G  DLESPTSTLCFS+NSMP+  VGFSD  + S+DLI N       
Sbjct: 208  KPTKCGLLTGEGSTGGLDLESPTSTLCFSDNSMPVLTVGFSDNPMPSLDLIPNSSGTSEG 267

Query: 562  -PGTXXXXXXXXXXXXXXXXXXKMQQPSHNDMG--VTMESPWLAQSSKSGHDHIPVTNFI 392
             P                            DMG   T++SPW ++SSK G++HIPVTNFI
Sbjct: 268  VPAVKEECDEEYMGGGEYKRMVNSVNTGLQDMGFSTTVDSPWASESSKGGNEHIPVTNFI 327

Query: 391  EGFTSLLLANSDD---RNSVDH-SGD-SDNADGTG--CDEYEENKNYWNNILNLVNSSPS 233
            EGFT+LLL NS     RNSVD+ SGD SDNAD     C+E+EENKNYWNNILNLVNSSPS
Sbjct: 328  EGFTNLLLGNSIHDRMRNSVDNTSGDSSDNADADAMDCEEFEENKNYWNNILNLVNSSPS 387

Query: 232  DSPVF 218
            DSP F
Sbjct: 388  DSPTF 392


>gb|ACN69972.1| MYB transcription factor ML2 [Thalictrum thalictroides]
          Length = 405

 Score =  478 bits (1231), Expect = e-132
 Identities = 254/365 (69%), Positives = 282/365 (77%), Gaps = 22/365 (6%)
 Frame = -1

Query: 1258 ALPTKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 1079
            ALP KAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK
Sbjct: 39   ALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 98

Query: 1078 RTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLE 899
            RTDNEIKNYWNTHLKKRL+KLGIDPVTHKPKSDALSS+DG TK+DSNLSHMAQWESARLE
Sbjct: 99   RTDNEIKNYWNTHLKKRLSKLGIDPVTHKPKSDALSSIDGHTKADSNLSHMAQWESARLE 158

Query: 898  AEARLVRESKLRSNSFIQQLGLSGSGTGMDQGHLHLSKGTTSSTQPHCLDILKAWQGAWS 719
            AEARLVRESKLRS+S   QLGLSGSG    Q    L+K T++STQP CL+++KAWQG WS
Sbjct: 159  AEARLVRESKLRSSSLNSQLGLSGSGVDPGQ---QLNKATSTSTQPQCLNVMKAWQGIWS 215

Query: 718  NSTKCGAVAGGGSS--GHDLESPTSTLCFSENSMPIANVGFSDR-NLSSVDLIHNPGTXX 548
              TKCG V G GSS  G DLESPTSTLCFS+NSMP+  VGFSD   +SS+DLI N  +  
Sbjct: 216  KPTKCGLVTGEGSSTGGLDLESPTSTLCFSDNSMPVLTVGFSDNPTMSSLDLIPNSSSGT 275

Query: 547  XXXXXXXXXXXXXXXXKMQQPSHN----------DMG--VTMESPWLAQSSKSGHDHIPV 404
                               +   N          DMG   T++SPW ++SSK G++HIPV
Sbjct: 276  FEGAPVKEECDEEYMGGEYKRMVNSAVPLNTGLQDMGFSTTVDSPWSSESSKVGNEHIPV 335

Query: 403  TNFIEGFTSLLLANS-DDRNSVDH-SGDSD-----NADGTGCDEYEENKNYWNNILNLVN 245
            TNFIEGFT+LLL NS +DRNSVD+ SGD D     +AD   C+E+EENKNYWNNILNLVN
Sbjct: 336  TNFIEGFTNLLLGNSINDRNSVDNTSGDGDSSDNGDADAMDCEEFEENKNYWNNILNLVN 395

Query: 244  SSPSD 230
            SSPSD
Sbjct: 396  SSPSD 400


>gb|ACT78694.1| mixta-like2 MYB transcription factor [Thalictrum filamentosum]
          Length = 388

 Score =  475 bits (1222), Expect = e-131
 Identities = 252/364 (69%), Positives = 281/364 (77%), Gaps = 21/364 (5%)
 Frame = -1

Query: 1258 ALPTKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 1079
            ALP KAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK
Sbjct: 23   ALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 82

Query: 1078 RTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLE 899
            RTDNEIKNYWNTHLKKRL+KLGIDPVTHKPKSDALSS+DG TK+DSNLSHMAQWESARLE
Sbjct: 83   RTDNEIKNYWNTHLKKRLSKLGIDPVTHKPKSDALSSIDGHTKADSNLSHMAQWESARLE 142

Query: 898  AEARLVRESKLRSNSFIQQLGLSGSGTGMDQGHLHLSKGTTSSTQPHCLDILKAWQGAWS 719
            AEARLVRESKLRS+S   QLGLSGSG    Q    L+K T++STQP CL+++KAWQG WS
Sbjct: 143  AEARLVRESKLRSSSLNNQLGLSGSGVDPGQ---QLNKATSTSTQPQCLNVMKAWQGIWS 199

Query: 718  NSTKCGAVAGGGSSGH-DLESPTSTLCFSENSMPIANVGFSDR-NLSSVDLIHNPGTXXX 545
              TKCG V G GS+G  DLESPTSTLCFS+NSMP+  VGFSD   +SS+DLI N  +   
Sbjct: 200  KPTKCGLVTGEGSTGGLDLESPTSTLCFSDNSMPVLTVGFSDNPTMSSLDLIPNSSSGTF 259

Query: 544  XXXXXXXXXXXXXXXKMQQPSHN----------DMG--VTMESPWLAQSSKSGHDHIPVT 401
                              +   N          DMG   T++SPW ++SSK G++HIPVT
Sbjct: 260  EGAPVKEECDEEYMGGEYKRMVNSAVPLNTGLQDMGFSTTVDSPWASESSKVGNEHIPVT 319

Query: 400  NFIEGFTSLLLANS-DDRNSVDH-SGDSDNADGTGCD-----EYEENKNYWNNILNLVNS 242
            NFIEGFT+LLL NS +DRNSVD+ SGD D++D    D     E+EENKNYWNNILNLVNS
Sbjct: 320  NFIEGFTNLLLGNSINDRNSVDNTSGDGDSSDNGDADAMDYEEFEENKNYWNNILNLVNS 379

Query: 241  SPSD 230
            SPSD
Sbjct: 380  SPSD 383


>ref|XP_002283843.1| PREDICTED: uncharacterized protein LOC100245564 [Vitis vinifera]
          Length = 393

 Score =  384 bits (985), Expect = e-104
 Identities = 216/369 (58%), Positives = 247/369 (66%), Gaps = 22/369 (5%)
 Frame = -1

Query: 1258 ALPTKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 1079
            ALP+KAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK
Sbjct: 39   ALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 98

Query: 1078 RTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLE 899
            RTDNEIKNYWNTHLKKRL K+GIDPVTHKPKSDAL S DGQ+K+ +NLSHMAQWESARLE
Sbjct: 99   RTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKSDALLSSDGQSKNAANLSHMAQWESARLE 158

Query: 898  AEARLVRESKLRSNSFIQQLGLSGSGTGMDQGHLHLSKGTTSSTQPHCLDILKAWQGAWS 719
            AEARLVRESKLRSNSF    G   + T    G         SS+ P  LD+LKAW G W 
Sbjct: 159  AEARLVRESKLRSNSFNHHPGTPSASTSAAVGG---KTAAVSSSPPLYLDVLKAWHGVWP 215

Query: 718  NSTKCGAVAGGGSSG----------HDLESPTSTLCFSENSMPIANVGFSDRNLSSVDLI 569
             ST+ G  +GGG  G           DLESPTSTL +SEN+  +A+        + +D +
Sbjct: 216  KSTEGGGSSGGGGGGGGGGGGVAVAGDLESPTSTLSYSENAAAVAST-------AVIDFV 268

Query: 568  HNPGT--XXXXXXXXXXXXXXXXXXKMQQPSH-----NDMGVTMES-PWLAQSSKSGHDH 413
             N G+                      Q P       +DM V M+S  W  +S K+    
Sbjct: 269  GNSGSCEGGIIKDEGDQQEWKGMGSSTQLPESFTSALHDMAVPMDSGAWTPESLKT---- 324

Query: 412  IPVTNFIEGFTSLLLANSDDR--NSVDHSGDSDN--ADGTGCDEYEENKNYWNNILNLVN 245
            +   +FIEGFT LLL+NS +R  +  D  GDSDN    G+G D YE+NKNYWN+ILNLVN
Sbjct: 325  VNGGHFIEGFTELLLSNSTNRTLSDTDGGGDSDNGGCSGSGSDYYEDNKNYWNSILNLVN 384

Query: 244  SSPSDSPVF 218
            SSP DSP+F
Sbjct: 385  SSPYDSPMF 393


>ref|XP_002323871.1| predicted protein [Populus trichocarpa] gi|222866873|gb|EEF04004.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  380 bits (976), Expect = e-103
 Identities = 214/371 (57%), Positives = 251/371 (67%), Gaps = 24/371 (6%)
 Frame = -1

Query: 1258 ALPTKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 1079
            ALP KAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK
Sbjct: 39   ALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPK 98

Query: 1078 RTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKSDALSSVDGQTKSDSNLSHMAQWESARLE 899
            RTDNEIKNYWNTHLKKRL K+GIDPVTHK K+DAL S+DGQ+K+ +NLSHMAQWESARLE
Sbjct: 99   RTDNEIKNYWNTHLKKRLAKMGIDPVTHKSKNDALLSIDGQSKNAANLSHMAQWESARLE 158

Query: 898  AEARLVRESKLRSNSFIQQLGLSGSGTGMDQGHLHLSKGTTSST---QPHCLDILKAWQG 728
            AEARLVRESKLRS S   QL  +  G     G    S G+TSST    P  LD LKAW  
Sbjct: 159  AEARLVRESKLRSQSIQHQLSSTTPGYFPGSGS---SPGSTSSTLAQPPRSLDALKAWND 215

Query: 727  AWSNSTKCGAVAGGGSS---GHDLESPTSTLCFSENSMPIANVGFSDRNLSSVDLIHNPG 557
             WS S++     GGG +   G  LESPTSTL FSEN+ P+ N G    N  S+ +I   G
Sbjct: 216  GWSKSSEGN---GGGLNMGIGDVLESPTSTLTFSENAPPVMNSGAVGEN--SISMIEFVG 270

Query: 556  TXXXXXXXXXXXXXXXXXXKMQQPSH------------NDMGVTMESPWLAQSSKSGHDH 413
            T                   +   SH            +DM ++ME+PW   S ++  D+
Sbjct: 271  TSGSTETGIIKEEGEHDWKSLSNSSHLPDNSVSLTSTLHDMTISMEAPWNPDSLRANCDN 330

Query: 412  IPVTNFI--EGFTSLLLANSDDRNSVDHSGDSDNA----DGTGCDEYEENKNYWNNILNL 251
            + V   +  EGFT LLL++S +R+  D   DSD++     G+G + YE+NKNYWN+ILNL
Sbjct: 331  VHVGKNVMEEGFTHLLLSDSAERSLSDDGKDSDHSGGSGSGSGSNYYEDNKNYWNSILNL 390

Query: 250  VNSSPSDSPVF 218
            VNSSPS+SP+F
Sbjct: 391  VNSSPSNSPMF 401


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