BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015293
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula] ...   144   7e-33
emb|CBI19279.3| unnamed protein product [Vitis vinifera]              144   7e-33
ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding prote...   144   7e-33
ref|XP_004163953.1| PREDICTED: double-stranded RNA-binding prote...   140   8e-32

>ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|222844096|gb|EEE81643.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/93 (78%), Positives = 79/93 (84%)
 Frame = -3

Query: 281 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 102
           M    GF+GVSNCYVFKSRLQEYAQK  L +PVYET KEGPSHEPSFRSTV V +V YDS
Sbjct: 1   MLTNEGFSGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVKDVRYDS 60

Query: 101 LPGFSNRKAAEQSAAEVALMELAKSGNINKSIS 3
           LPGF NRKAAEQSAAEVAL+ELAK+G IN+S S
Sbjct: 61  LPGFFNRKAAEQSAAEVALVELAKAGEINESTS 93


>ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula]
           gi|355491942|gb|AES73145.1| DsRNA-binding protein
           [Medicago truncatula]
          Length = 780

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/94 (78%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
 Frame = -3

Query: 281 MSITN-GFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYD 105
           MS TN  F GVSNCYVFKS+LQEYAQK  L +PVYETTKEGPSHEPSFRSTV +N+V YD
Sbjct: 1   MSTTNEDFQGVSNCYVFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYD 60

Query: 104 SLPGFSNRKAAEQSAAEVALMELAKSGNINKSIS 3
           SL GF NRKAAEQSAAEVALMELAK+G +N+SI+
Sbjct: 61  SLAGFFNRKAAEQSAAEVALMELAKTGEVNQSIT 94


>emb|CBI19279.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  144 bits (363), Expect = 7e-33
 Identities = 72/93 (77%), Positives = 81/93 (87%)
 Frame = -3

Query: 281 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 102
           MS  +GFAGVSNCYVFKSRLQEYAQK  L +P+Y+T KEGP H PSF+STV VN+V YDS
Sbjct: 1   MSSNDGFAGVSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDS 60

Query: 101 LPGFSNRKAAEQSAAEVALMELAKSGNINKSIS 3
           LPGFSNRKAAEQSAAEVAL+ELAKSGN+ + IS
Sbjct: 61  LPGFSNRKAAEQSAAEVALVELAKSGNMKECIS 93


>ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding protein 1 [Vitis vinifera]
           gi|147781065|emb|CAN68128.1| hypothetical protein
           VITISV_043706 [Vitis vinifera]
          Length = 400

 Score =  144 bits (363), Expect = 7e-33
 Identities = 72/93 (77%), Positives = 81/93 (87%)
 Frame = -3

Query: 281 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 102
           MS  +GFAGVSNCYVFKSRLQEYAQK  L +P+Y+T KEGP H PSF+STV VN+V YDS
Sbjct: 1   MSSNDGFAGVSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDS 60

Query: 101 LPGFSNRKAAEQSAAEVALMELAKSGNINKSIS 3
           LPGFSNRKAAEQSAAEVAL+ELAKSGN+ + IS
Sbjct: 61  LPGFSNRKAAEQSAAEVALVELAKSGNMKECIS 93


>ref|XP_004163953.1| PREDICTED: double-stranded RNA-binding protein 1-like [Cucumis
           sativus]
          Length = 351

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/93 (75%), Positives = 78/93 (83%)
 Frame = -3

Query: 281 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 102
           M   + F GVSNCYVFKSRLQEYAQK  L +PVYET KEGPSHEP+F STV VN+V YDS
Sbjct: 1   MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 101 LPGFSNRKAAEQSAAEVALMELAKSGNINKSIS 3
           LPGFSNRKAAEQSAAEVALMEL+KS ++N  +S
Sbjct: 61  LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVS 93