BLASTX nr result

ID: Coptis21_contig00015290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015290
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   221   2e-55
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   220   5e-55
ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|2...   219   8e-55
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   216   7e-54
ref|XP_002310781.1| predicted protein [Populus trichocarpa] gi|2...   213   6e-53

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  221 bits (564), Expect = 2e-55
 Identities = 115/222 (51%), Positives = 137/222 (61%), Gaps = 10/222 (4%)
 Frame = -2

Query: 791 TKSVPRSENAXXXXXXGNDA-DFECNICFELAQDPIVTLCGHLYCWPCLYQWLHFHSRSQ 615
           T   P+S +        +DA +FECNICF+LAQDPIVTLCGHL+CWPCLY+WLH HS SQ
Sbjct: 9   TSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHIHSHSQ 68

Query: 614 ACPVCKAVIEEEKLVPLYGRGKTQSDPRSRSVPGVDVPNRPAGQRPETAPDVNAN----- 450
            CPVCKA++EEEKLVPLYGRGKT +DPRS+S+PG+++PNRP GQRPETAP  +AN     
Sbjct: 69  ECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPPDANHFMQH 128

Query: 449 ---XXXXXXXXXXXXXXXXGNINFSAAFGGLFPA-FNFQMHXXXXXXXXXXXXXXXXXXX 282
                              GN   SAAFGGLFP+ FN Q+H                   
Sbjct: 129 GFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVH--GFPDATMYGPAAGFPYG 186

Query: 281 XXNAFHGGHTHGYPTQHGNQGQQDDNRLTTLLMVIGFLVIFA 156
             N+FHGGH HG+P     QGQQ D  L  L ++IG  VI A
Sbjct: 187 FSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVIIA 228


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  220 bits (560), Expect = 5e-55
 Identities = 117/221 (52%), Positives = 137/221 (61%), Gaps = 9/221 (4%)
 Frame = -2

Query: 791 TKSVPRSENAXXXXXXGNDADFECNICFELAQDPIVTLCGHLYCWPCLYQWLHFHSRSQA 612
           T   P + +       G+  +FECNICF+LAQDPIVTLCGHL+CWPCLY+WLHFHS+S+ 
Sbjct: 9   TSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSKSRE 68

Query: 611 CPVCKAVIEEEKLVPLYGRGKTQSDPRSRSVPGVDVPNRPAGQRPETAPDVNAN------ 450
           CPVCKA++EEEKLVPLYGRGKT +DPRS+S+PGV++PNRPAGQRPETAP    N      
Sbjct: 69  CPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFGQHG 128

Query: 449 --XXXXXXXXXXXXXXXXGNINFSAAFGGLFPA-FNFQMHXXXXXXXXXXXXXXXXXXXX 279
                             GN  FSAAFGGL P+ FN Q+H                    
Sbjct: 129 FGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVH----GFPDAAMYGPAGYPYG 184

Query: 278 XNAFHGGHTHGYPTQHGNQGQQDDNRLTTLLMVIGFLVIFA 156
            N+FHGGH HGY   HG QGQQ D  L  LL+ IGF V  A
Sbjct: 185 FNSFHGGHPHGYRQHHG-QGQQ-DYYLKRLLLFIGFCVFLA 223


>ref|XP_002326898.1| predicted protein [Populus trichocarpa] gi|222835213|gb|EEE73648.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  219 bits (558), Expect = 8e-55
 Identities = 116/222 (52%), Positives = 139/222 (62%), Gaps = 10/222 (4%)
 Frame = -2

Query: 791 TKSVPRSENAXXXXXXGNDADFECNICFELAQDPIVTLCGHLYCWPCLYQWLHFHSRSQA 612
           T  VP++ +       G+  DFECNICF+LAQDPIVTLCGHL+CWPCLY+WLHFHS+S+ 
Sbjct: 9   TSGVPQNPSFTSSNGNGDAGDFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSKSRE 68

Query: 611 CPVCKAVIEEEKLVPLYGRGKTQSDPRSRSVPGVDVPNRPAGQRPETAPDVNAN------ 450
           CPVCKA++EEEKLVPLYGRGKT +DPRS+S+PGV++PNRPAGQRPETAP    N      
Sbjct: 69  CPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFGQHG 128

Query: 449 --XXXXXXXXXXXXXXXXGNINFSAAFGGLFPA-FNFQMHXXXXXXXXXXXXXXXXXXXX 279
                             GN  FSAAFGGL P+ FN Q+H                    
Sbjct: 129 FGLTGGLGGFAPTATARSGNFTFSAAFGGLIPSLFNLQVH---GFPNAAMYGPAAGFPYG 185

Query: 278 XNAFHGGHTHGYPTQHGNQGQ-QDDNRLTTLLMVIGFLVIFA 156
            ++FHGGH  GY   H +QGQ Q D  L  LL+ IGF V+ A
Sbjct: 186 FHSFHGGHPRGY---HRHQGQGQQDYYLKRLLLFIGFCVLLA 224


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  216 bits (550), Expect = 7e-54
 Identities = 116/217 (53%), Positives = 135/217 (62%), Gaps = 9/217 (4%)
 Frame = -2

Query: 779 PRSENAXXXXXXGNDADFECNICFELAQDPIVTLCGHLYCWPCLYQWLHFHSRSQACPVC 600
           P+S         G+  +FECNICF+LAQDPIVTLCGHL+CWPCLY+WLHFHS+S+ CPVC
Sbjct: 13  PQSPQFSSNYSNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSQSKECPVC 72

Query: 599 KAVIEEEKLVPLYGRGKTQSDPRSRSVPGVDVPNRPAGQRPETAPDVNAN--------XX 444
           KA++EEEKLVPLYGRGKT +DPRS+S+PGV++PNRPAGQRPETAP    N          
Sbjct: 73  KALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQHGFGFM 132

Query: 443 XXXXXXXXXXXXXXGNINFSAAFGGLFPA-FNFQMHXXXXXXXXXXXXXXXXXXXXXNAF 267
                         GN   SAAFGGL P+ FN Q+H                     N+F
Sbjct: 133 GGLGGFAPMATARFGNFTLSAAFGGLIPSLFNLQVH--GFPDAAMYGTATGFPYGFSNSF 190

Query: 266 HGGHTHGYPTQHGNQGQQDDNRLTTLLMVIGFLVIFA 156
           HGGH HGY  QH  QGQQ D  L  LL  IGF V+ A
Sbjct: 191 HGGHAHGY-HQHQGQGQQ-DYYLKRLLFFIGFCVLLA 225


>ref|XP_002310781.1| predicted protein [Populus trichocarpa] gi|222853684|gb|EEE91231.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  213 bits (542), Expect = 6e-53
 Identities = 111/221 (50%), Positives = 133/221 (60%), Gaps = 8/221 (3%)
 Frame = -2

Query: 794 DTKSVPRSENAXXXXXXGNDADFECNICFELAQDPIVTLCGHLYCWPCLYQWLHFHSRSQ 615
           ++ SVP   ++       +  DFECNICFELA+DPIVTLCGHLYCWPCLYQWLH HS S 
Sbjct: 7   ESTSVPPERSSYSSNNGNDAGDFECNICFELARDPIVTLCGHLYCWPCLYQWLHLHSHSH 66

Query: 614 ACPVCKAVIEEEKLVPLYGRGKTQSDPRSRSVPGVDVPNRPAGQRPETAPDVNAN----- 450
            CPVCKA+I+EEKLVPLYGRG +QSDPRS+S PG+D+P+RP+GQRPETAP  +AN     
Sbjct: 67  ECPVCKAIIQEEKLVPLYGRGNSQSDPRSKSYPGIDIPSRPSGQRPETAPPPDANNSPNF 126

Query: 449 XXXXXXXXXXXXXXXXGNINFSAAFGGL--FPA-FNFQMHXXXXXXXXXXXXXXXXXXXX 279
                           GN  FS AFGGL  FP+ FN Q                      
Sbjct: 127 GFGMAGGYMPTAAARSGNFTFSTAFGGLSHFPSFFNVQFQGFPDATVYGTTSGFPYGFHG 186

Query: 278 XNAFHGGHTHGYPTQHGNQGQQDDNRLTTLLMVIGFLVIFA 156
            + FHG H H +P     +GQ+ DN L  L  +IGFLV+ A
Sbjct: 187 FHGFHGHHAHRFPPA-TIRGQRADNVLKNLFFLIGFLVVIA 226


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