BLASTX nr result

ID: Coptis21_contig00015274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015274
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333360.1| predicted protein [Populus trichocarpa] gi|2...    74   5e-24
ref|XP_002306986.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-23
ref|XP_003527316.1| PREDICTED: U-box domain-containing protein 4...    73   3e-23
ref|XP_003523040.1| PREDICTED: U-box domain-containing protein 4...    73   3e-23
ref|XP_002510699.1| ubiquitin-protein ligase, putative [Ricinus ...    69   6e-22

>ref|XP_002333360.1| predicted protein [Populus trichocarpa] gi|222836311|gb|EEE74732.1|
           predicted protein [Populus trichocarpa]
          Length = 813

 Score = 73.6 bits (179), Expect(2) = 5e-24
 Identities = 38/54 (70%), Positives = 42/54 (77%)
 Frame = -3

Query: 295 EKADKTLKNLEKCERNV*QMAENGRXXXXXXXXLEGPVETKLAMVAYLGELVLS 134
           EKADKTL+NLEKCE NV QMAENGR        LEGP ETKL+M +YLGELVL+
Sbjct: 254 EKADKTLENLEKCENNVRQMAENGRLKPLLNQILEGPPETKLSMASYLGELVLN 307



 Score = 62.4 bits (150), Expect(2) = 5e-24
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -1

Query: 138 LANDVKVVVARMVGSSLVNVMRSGNMRSREAALKALNQL 22
           L NDVKV VAR VGSSL+N+MRSGN++SREAALKALNQ+
Sbjct: 306 LNNDVKVHVARAVGSSLINIMRSGNVQSREAALKALNQI 344


>ref|XP_002306986.1| predicted protein [Populus trichocarpa] gi|222856435|gb|EEE93982.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score = 71.6 bits (174), Expect(2) = 1e-23
 Identities = 37/54 (68%), Positives = 41/54 (75%)
 Frame = -3

Query: 295 EKADKTLKNLEKCERNV*QMAENGRXXXXXXXXLEGPVETKLAMVAYLGELVLS 134
           EKADKTL NLEKCE NV QMAENGR        LEGP ETKL+M +YLGELV++
Sbjct: 254 EKADKTLGNLEKCENNVRQMAENGRLRPLLNQILEGPPETKLSMASYLGELVMN 307



 Score = 62.8 bits (151), Expect(2) = 1e-23
 Identities = 30/37 (81%), Positives = 36/37 (97%)
 Frame = -1

Query: 132 NDVKVVVARMVGSSLVNVMRSGNMRSREAALKALNQL 22
           NDVKV+VAR VGSSL+N+MRSG+M+SREAALKALNQ+
Sbjct: 308 NDVKVLVARTVGSSLINIMRSGDMQSREAALKALNQI 344


>ref|XP_003527316.1| PREDICTED: U-box domain-containing protein 43-like [Glycine max]
          Length = 814

 Score = 72.8 bits (177), Expect(2) = 3e-23
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = -3

Query: 295 EKADKTLKNLEKCERNV*QMAENGRXXXXXXXXLEGPVETKLAMVAYLGELVLS 134
           EKADKTL+NLEKCE NV QMAENGR        LEGP ETKL+M  YLGELVL+
Sbjct: 255 EKADKTLENLEKCESNVRQMAENGRLQPLLTQLLEGPPETKLSMATYLGELVLN 308



 Score = 60.5 bits (145), Expect(2) = 3e-23
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -1

Query: 138 LANDVKVVVARMVGSSLVNVMRSGNMRSREAALKALNQL 22
           L NDVKV+VA  VGSSL+N+M+SGNM+SREAAL+ALNQ+
Sbjct: 307 LNNDVKVLVAGTVGSSLINIMKSGNMQSREAALRALNQI 345


>ref|XP_003523040.1| PREDICTED: U-box domain-containing protein 43-like [Glycine max]
          Length = 813

 Score = 72.8 bits (177), Expect(2) = 3e-23
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = -3

Query: 295 EKADKTLKNLEKCERNV*QMAENGRXXXXXXXXLEGPVETKLAMVAYLGELVLS 134
           EKADKTL+NLEKCE NV QMAENGR        LEGP ETKL+M  YLGELVL+
Sbjct: 254 EKADKTLENLEKCESNVRQMAENGRLQPLLTQLLEGPPETKLSMATYLGELVLN 307



 Score = 60.5 bits (145), Expect(2) = 3e-23
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -1

Query: 138 LANDVKVVVARMVGSSLVNVMRSGNMRSREAALKALNQL 22
           L NDVKV+VA  VGSSL+N+M+SGNM+SREAAL+ALNQ+
Sbjct: 306 LNNDVKVLVAGTVGSSLINIMKSGNMQSREAALRALNQI 344


>ref|XP_002510699.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551400|gb|EEF52886.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 813

 Score = 69.3 bits (168), Expect(2) = 6e-22
 Identities = 36/54 (66%), Positives = 40/54 (74%)
 Frame = -3

Query: 295 EKADKTLKNLEKCERNV*QMAENGRXXXXXXXXLEGPVETKLAMVAYLGELVLS 134
           E A+KTL+NLEKCE NV QMAENGR        LEGP ETKL M +YLGELVL+
Sbjct: 254 EMAEKTLENLEKCENNVRQMAENGRLQPLLNQLLEGPPETKLVMASYLGELVLN 307



 Score = 59.7 bits (143), Expect(2) = 6e-22
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -1

Query: 138 LANDVKVVVARMVGSSLVNVMRSGNMRSREAALKALNQL 22
           L NDVKV VAR +GSSL+++MRSGN +SREAALKALNQ+
Sbjct: 306 LNNDVKVHVARTIGSSLIDIMRSGNTKSREAALKALNQI 344


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