BLASTX nr result

ID: Coptis21_contig00015260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015260
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Viti...    96   4e-18
ref|NP_001062672.1| Os09g0249400 [Oryza sativa Japonica Group] g...    89   5e-16
ref|XP_002462061.1| hypothetical protein SORBIDRAFT_02g015330 [S...    87   1e-15
ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|NP_001143631.1| CASP-like protein 13 [Zea mays] gi|403399771...    87   1e-15

>ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Vitis vinifera]
           gi|297740318|emb|CBI30500.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -3

Query: 259 RIKRDLKNPVLVCLFVVGDWVXXXXXXXXXXXXAGVTILYVTDFGLCGL-LPISCSRFQI 83
           +IKRDL+NPVLV LFVVGDWV            AGV +LY  D   C   + I CSRFQI
Sbjct: 69  KIKRDLQNPVLVSLFVVGDWVTATLSLAAACSSAGVMVLYARDLDFCRAEMHIPCSRFQI 128

Query: 82  SVALAFITWFLVATSCLVMFWMLGSV 5
           S+ALAFITWF +A S  VMFW+L SV
Sbjct: 129 SIALAFITWFFIAISSHVMFWILASV 154


>ref|NP_001062672.1| Os09g0249400 [Oryza sativa Japonica Group]
           gi|75125061|sp|Q6K478.1|CSPLQ_ORYSJ RecName:
           Full=CASP-like protein Os09g0249400
           gi|403399781|sp|B8BD96.1|CSPLQ_ORYSI RecName:
           Full=CASP-like protein OsI_30532
           gi|47497809|dbj|BAD19907.1| integral membrane
           protein-like [Oryza sativa Japonica Group]
           gi|113630905|dbj|BAF24586.1| Os09g0249400 [Oryza sativa
           Japonica Group] gi|215686522|dbj|BAG88775.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218201733|gb|EEC84160.1| hypothetical protein
           OsI_30532 [Oryza sativa Indica Group]
           gi|222641130|gb|EEE69262.1| hypothetical protein
           OsJ_28518 [Oryza sativa Japonica Group]
          Length = 154

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = -3

Query: 253 KRDLKNPVLVCLFVVGDWVXXXXXXXXXXXXAGVTILYVTDFGLCGLLP-ISCSRFQISV 77
           KRDL NPVLV LFVVGDWV            AGVTIL+  D   C + P +SC R+++SV
Sbjct: 71  KRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQLSCGRYELSV 130

Query: 76  ALAFITWFLVATSCLVMFWMLGSV 5
            LAFITW  +ATS + MFW+L S+
Sbjct: 131 ILAFITWSFIATSAVSMFWLLASL 154


>ref|XP_002462061.1| hypothetical protein SORBIDRAFT_02g015330 [Sorghum bicolor]
           gi|241925438|gb|EER98582.1| hypothetical protein
           SORBIDRAFT_02g015330 [Sorghum bicolor]
          Length = 154

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -3

Query: 259 RIKRDLKNPVLVCLFVVGDWVXXXXXXXXXXXXAGVTILYVTDFGLCGLLP-ISCSRFQI 83
           + KRDL NPVLV LFVVGDWV            AGVTIL+  D   C + P +SC R+ +
Sbjct: 69  KTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQLSCGRYAL 128

Query: 82  SVALAFITWFLVATSCLVMFWMLGSV 5
           SV LAFITW  +ATS + MFW+L S+
Sbjct: 129 SVVLAFITWSFIATSAVSMFWLLPSL 154


>ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|222855061|gb|EEE92608.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -3

Query: 259 RIKRDLKNPVLVCLFVVGDWVXXXXXXXXXXXXAGVTILYVTDFGLCGLLP-ISCSRFQI 83
           R K+DL+NPVLV LFVVGDWV            AGV +LY  D   C + P + CSR++I
Sbjct: 69  RRKKDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYARDMNFCKIHPDLPCSRYEI 128

Query: 82  SVALAFITWFLVATSCLVMFWMLGSV 5
           S+ LAFITW  V+ S  VMFW+L SV
Sbjct: 129 SILLAFITWLQVSISSHVMFWILASV 154


>ref|NP_001143631.1| CASP-like protein 13 [Zea mays]
           gi|403399771|sp|B6T990.1|CSPLI_MAIZE RecName:
           Full=CASP-like protein 13 gi|195623686|gb|ACG33673.1|
           hypothetical protein [Zea mays]
          Length = 154

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -3

Query: 259 RIKRDLKNPVLVCLFVVGDWVXXXXXXXXXXXXAGVTILYVTDFGLCGLLP-ISCSRFQI 83
           + KRDL NPVLV LFVVGDWV            AGVTIL+  D   C + P +SC R+ +
Sbjct: 69  KTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQLSCGRYAL 128

Query: 82  SVALAFITWFLVATSCLVMFWMLGSV 5
           SV LAFITW  +ATS + MFW+L S+
Sbjct: 129 SVVLAFITWSFIATSAVSMFWLLPSL 154


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