BLASTX nr result

ID: Coptis21_contig00015257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015257
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210...   166   8e-39
ref|XP_002509538.1| conserved hypothetical protein [Ricinus comm...   154   3e-35
ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
emb|CAN62725.1| hypothetical protein VITISV_031003 [Vitis vinifera]   144   6e-32
ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210...   133   8e-29

>ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210-like [Vitis vinifera]
          Length = 247

 Score =  166 bits (421), Expect = 8e-39
 Identities = 110/242 (45%), Positives = 135/242 (55%), Gaps = 24/242 (9%)
 Frame = +2

Query: 146 MGSCASVYKKEDAA---------KNDK-----PINGEC----PPVSLLSFKSQSSPMLPQ 271
           MGSC SV++   +A         K DK     PI        PP+  LS K+Q SP  P 
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 272 TGFRDFGSKEEIFFDSQAWLESDCDDDFMSVNGDFIPSCGNTPSRGNTPNRQSSFIGTPQ 451
           T FRDFGSKEEIFFDSQ WLESD  DDF SVNGDF      TPSRGNTP   +  IGTP 
Sbjct: 61  TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDF------TPSRGNTPVHPNVSIGTPH 113

Query: 452 LNKTIFMGTAENMKPEFSPTGKKKKLSDLFRESFQVDEDSGD------RNTDDGTLEVKP 613
            NK  F        P  SPTG+KKKL++LF ES + D D  D      +N  +G +EVK 
Sbjct: 114 ANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKR 173

Query: 614 TKLGIQSNASHESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHHCCLPSLVPSRRSSE 793
           T L     +++ +P  SG NS  +  +TP+ D  SE+ K  R+   CCLPSL  +R  +E
Sbjct: 174 TILDFPPESANGTPLASGPNSVCSGGRTPNGDFKSEKEKPLRS-TQCCLPSLRLNRSFNE 232

Query: 794 KK 799
           +K
Sbjct: 233 RK 234


>ref|XP_002509538.1| conserved hypothetical protein [Ricinus communis]
           gi|223549437|gb|EEF50925.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  154 bits (390), Expect = 3e-35
 Identities = 101/233 (43%), Positives = 135/233 (57%), Gaps = 15/233 (6%)
 Frame = +2

Query: 146 MGSCASVYK--KEDAAK-----NDKPINGECPPVSLLSFKSQSSPMLPQTGFRDFGSKEE 304
           MGSCASV+K   E A K       K  N   P   +       +   P   F D GSK+E
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKD--KHVNDHTPIKTFDDHGSKDE 58

Query: 305 IFFDSQAWLESDCDDDFMSVNGDFIPSCGNTPSRGNTPNRQSSFIGTPQLNKTIFMG--T 478
            FFDS+AWL+SDC+DDF SVNGDF      TPSRGNTP   +  +GTP++NKT   G   
Sbjct: 59  TFFDSRAWLDSDCEDDFFSVNGDF------TPSRGNTPVHHNFSMGTPKINKTTLEGRPP 112

Query: 479 AENMKPEFSPTGKKKKLSDLFRESFQVDED------SGDRNTDDGTLEVKPTKLGIQSNA 640
                PE SPTG KK+LS+LFRES + +++      S  +N  +G  EVK T L +   +
Sbjct: 113 TPGSIPEPSPTG-KKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVLPKS 171

Query: 641 SHESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHHCCLPSLVPSRRSSEKK 799
           +  +PY SGANS  +S++T + D++ ER KS ++   CCLPSL+  R  S++K
Sbjct: 172 ASGTPYISGANSVCSSERTANGDALIEREKSIKSA-QCCLPSLISCRSFSDRK 223


>ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|222845872|gb|EEE83419.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  145 bits (367), Expect = 1e-32
 Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
 Frame = +2

Query: 293 SKEEIFFDSQAWLESDCDDDFMSVNGDFIPSCGNTPSRGNTPNRQSSFIGTPQLNKTIFM 472
           SKEE FFDS+AWL+SDC+DDF SVNGDF      TPSRGNTP   +   GTPQ NK    
Sbjct: 152 SKEETFFDSRAWLDSDCEDDFYSVNGDF------TPSRGNTPVHHNFSAGTPQANKNPLE 205

Query: 473 GTAENMKPEFSPTGKKKKLSDLFRESFQVDED--------SGDRNTDDGTLEVKPTKLGI 628
           G     + E SPTG KK+LS+LF++  + D D        SGD+N  +G +EVK T L +
Sbjct: 206 GRPPGSELEPSPTG-KKRLSELFKDRIREDRDVDDLQTSGSGDQNIANGKMEVKQTILDV 264

Query: 629 QSNASHESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHHCCLPSLVPSRRSSEKK 799
              +++ +PY SG NS  +S++T + D++ E+ KS ++   CC+PSL+  R  SE+K
Sbjct: 265 LPKSANATPYLSGTNSVCSSERTANGDALIEKEKSFKSS-PCCIPSLIFCRSFSERK 320


>emb|CAN62725.1| hypothetical protein VITISV_031003 [Vitis vinifera]
          Length = 196

 Score =  144 bits (362), Expect = 6e-32
 Identities = 94/201 (46%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
 Frame = +2

Query: 146 MGSCASVYKKEDAA---------KNDK-----PINGEC----PPVSLLSFKSQSSPMLPQ 271
           MGSC SV++   +A         K DK     PI        PP+  LS K+Q SP  P 
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 272 TGFRDFGSKEEIFFDSQAWLESDCDDDFMSVNGDFIPSCGNTPSRGNTPNRQSSFIGTPQ 451
           T FRDFGSKEEIFFDSQ WLESD  DDF SVNGDF      TPSRGNTP   +  IGTP 
Sbjct: 61  TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDF------TPSRGNTPVHPNVSIGTPH 113

Query: 452 LNKTIFMGTAENMKPEFSPTGKKKKLSDLFRESFQVDEDSGD------RNTDDGTLEVKP 613
            NK  F        P  SPTG+KKKL++LF ES + D D  D      +N  +G +EVK 
Sbjct: 114 ANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKR 173

Query: 614 TKLGIQSNASHESPYTSGANS 676
           T L     +++ +P  SG NS
Sbjct: 174 TILDFPPESANGTPLASGPNS 194


>ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus]
          Length = 219

 Score =  133 bits (335), Expect = 8e-29
 Identities = 91/221 (41%), Positives = 123/221 (55%), Gaps = 13/221 (5%)
 Frame = +2

Query: 146 MGSCASVYKKEDAAKN------DKPINGECPPVSLLSFKSQSSPMLP------QTGFRDF 289
           MGSCAS+++  D+A         K  + E PP  +   K  ++P+ P      QT     
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPI---KQNNTPINPTVFLKSQTSPSHL 57

Query: 290 GSKEEIFFDSQAWLESDCDDDFMSVNGDFIPSCGNTPSRGNTPNRQSSFIGTPQLNKTIF 469
           GSK+E FFDS+ WL+SDC+DDF SVNGDF      TPSRGNTP   S   GTP++N+   
Sbjct: 58  GSKDEAFFDSRGWLDSDCEDDFYSVNGDF------TPSRGNTPVHSSFSSGTPRINQVHG 111

Query: 470 MGTAENMK-PEFSPTGKKKKLSDLFRESFQVDEDSGDRNTDDGTLEVKPTKLGIQSNASH 646
           +     +  PE SPTG KK+L++LFRES         RN  D   +    +L +QSN   
Sbjct: 112 IDDQTPITIPEPSPTG-KKRLAELFRES--------SRNGTDRQAKPTLNELALQSNP-- 160

Query: 647 ESPYTSGANSDSNSKKTPSRDSISERVKSSRTGHHCCLPSL 769
           E+PY SG NS  +S++TP+ D   E+ +   +   CCLPSL
Sbjct: 161 ETPYISGTNSVCSSERTPNGDVWGEKERPFGS-VQCCLPSL 200


Top