BLASTX nr result

ID: Coptis21_contig00015253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015253
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|2...   492   e-136
ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   480   e-133
ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970...   478   e-132
ref|XP_004149471.1| PREDICTED: uncharacterized protein At4g15970...   468   e-129
ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970...   467   e-129

>ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1|
            predicted protein [Populus trichocarpa]
          Length = 404

 Score =  492 bits (1266), Expect = e-136
 Identities = 231/335 (68%), Positives = 275/335 (82%), Gaps = 8/335 (2%)
 Frame = -2

Query: 1457 MLFFAAVAFPCLVIYQAASSFQSIPRSSS-TIVIDHSTLDTTNSTSE-------PDEVRL 1302
            +L F A++   L++Y AA S +    SS  +  I  S  ++ NS S+        D+ +L
Sbjct: 49   VLVFVAISVSVLLLYGAADSLRFQSSSSGYSFNIFPSLRNSNNSDSKLSINDDGDDDYKL 108

Query: 1301 DRVLKEASMDDGTVILTTLNEAWAASDSIIDLFLESFRIGNQTHRLLKHLVIITLDRKAY 1122
            ++VLKEA+M+D TVI+ TLNEAWAA ++IIDLFLESFRIG  T RLL HLVI+ LDRKAY
Sbjct: 109  EKVLKEAAMEDKTVIIATLNEAWAAPNTIIDLFLESFRIGQGTRRLLNHLVIVALDRKAY 168

Query: 1121 IRCLGLHTHCFALTTEGLDFSKEAYFMTPDYLKMMWRRIDFLRSVLEMGYNFVFTDADVM 942
             RC+  H HCFAL T+GLDF  EAYFMTP YL+MMWRRIDFLR+VL+MGYNFVFTDAD+M
Sbjct: 169  KRCMEFHAHCFALVTQGLDFHDEAYFMTPAYLEMMWRRIDFLRAVLQMGYNFVFTDADIM 228

Query: 941  WFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNYVKSNNRTIAFYKYWYSSRETH 762
            WFRDPFPRFYLDADFQIACDHF+GNS D+ N+PNGGFNYVKSNNRTI FYK+WYSSRET+
Sbjct: 229  WFRDPFPRFYLDADFQIACDHFLGNSSDIQNRPNGGFNYVKSNNRTIEFYKFWYSSRETY 288

Query: 761  PGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEPSKSLNQVCTMHANCCYGMDSK 582
            PGYHDQDVLN IKFDPFI ++GL MRFL+TA+FGGLCEPSK LN VCTMHANCCYG+DSK
Sbjct: 289  PGYHDQDVLNFIKFDPFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLDSK 348

Query: 581  LHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 477
            LHDLRIML+DW+ F++LPP++KR+S   W +PQNC
Sbjct: 349  LHDLRIMLQDWKTFLSLPPALKRSSSMLWTVPQNC 383


>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  480 bits (1235), Expect = e-133
 Identities = 228/329 (69%), Positives = 275/329 (83%), Gaps = 2/329 (0%)
 Frame = -2

Query: 1457 MLFFAAVAFPCLVIYQAASS--FQSIPRSSSTIVIDHSTLDTTNSTSEPDEVRLDRVLKE 1284
            +L F  ++  CL++Y A+ S  F S P S+S   I  S +DT +S    +E +L++VLKE
Sbjct: 49   VLVFGFMSLCCLLLYGASDSPRFLSFP-SASLPYIFPSAVDT-DSLPVSNEQKLEKVLKE 106

Query: 1283 ASMDDGTVILTTLNEAWAASDSIIDLFLESFRIGNQTHRLLKHLVIITLDRKAYIRCLGL 1104
            A+M D TVILTTLNEAWAA +S+IDLFL SFR+G  T +LL HLVII LD+KA  RC+ +
Sbjct: 107  AAMKDKTVILTTLNEAWAAPNSVIDLFLASFRLGEHTRKLLNHLVIIALDQKANARCIQV 166

Query: 1103 HTHCFALTTEGLDFSKEAYFMTPDYLKMMWRRIDFLRSVLEMGYNFVFTDADVMWFRDPF 924
            H HCFAL T+G+DFS EAYFMTP YLKMMWRRIDFLRSVLEMGYNFVFTDAD+MWFRDPF
Sbjct: 167  HDHCFALLTDGIDFSNEAYFMTPAYLKMMWRRIDFLRSVLEMGYNFVFTDADIMWFRDPF 226

Query: 923  PRFYLDADFQIACDHFMGNSFDLNNKPNGGFNYVKSNNRTIAFYKYWYSSRETHPGYHDQ 744
            PRFY DADFQIACDHF G+S +++NKPNGGFNYV+SNNR+I FYK+WYSSRET+PG HDQ
Sbjct: 227  PRFYSDADFQIACDHFTGSSINIHNKPNGGFNYVRSNNRSIEFYKFWYSSRETYPGIHDQ 286

Query: 743  DVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEPSKSLNQVCTMHANCCYGMDSKLHDLRI 564
            DVLN IK   FI ++GL MRFL+TA+FGGLCEPSK LN VCTMHANCCYG++SKLHDLRI
Sbjct: 287  DVLNKIKNASFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLESKLHDLRI 346

Query: 563  MLEDWRKFMTLPPSVKRASLSSWRIPQNC 477
            ML+DW++F++LPPS+KR+S+ SWR+PQNC
Sbjct: 347  MLQDWKRFLSLPPSLKRSSVVSWRVPQNC 375


>ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970 [Vitis vinifera]
          Length = 415

 Score =  478 bits (1231), Expect = e-132
 Identities = 222/320 (69%), Positives = 270/320 (84%), Gaps = 1/320 (0%)
 Frame = -2

Query: 1433 FPCLVIYQAASSFQSIPRSSST-IVIDHSTLDTTNSTSEPDEVRLDRVLKEASMDDGTVI 1257
            FP  V   A SSF +    ++  +++     +  NS  E +E+RL+RVLK+A+M+D TVI
Sbjct: 75   FPLPVPRAAPSSFNNNNWPATFGLILPSDPSEVGNSPPENEELRLERVLKDAAMEDHTVI 134

Query: 1256 LTTLNEAWAASDSIIDLFLESFRIGNQTHRLLKHLVIITLDRKAYIRCLGLHTHCFALTT 1077
            LTTLNEAWAA DS+IDLFLESFRIG+ T R L HLVII LD+KA+ RCL LH HCF L T
Sbjct: 135  LTTLNEAWAAPDSVIDLFLESFRIGDHTRRYLNHLVIIALDQKAFARCLILHNHCFTLVT 194

Query: 1076 EGLDFSKEAYFMTPDYLKMMWRRIDFLRSVLEMGYNFVFTDADVMWFRDPFPRFYLDADF 897
            EG+DFS EAYFMT DYLKMMWRRIDFLRSVLEMGYNF+F+DAD+MWFRDPFP F  +ADF
Sbjct: 195  EGVDFSGEAYFMTSDYLKMMWRRIDFLRSVLEMGYNFIFSDADIMWFRDPFPHFLPNADF 254

Query: 896  QIACDHFMGNSFDLNNKPNGGFNYVKSNNRTIAFYKYWYSSRETHPGYHDQDVLNMIKFD 717
            QIACDHF+G+ +++NN+PNGGFNYV+SNNR+I FYK+WYSSRET+PG HDQDVLN+IKFD
Sbjct: 255  QIACDHFLGDPYNVNNRPNGGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDVLNIIKFD 314

Query: 716  PFITEIGLTMRFLNTAYFGGLCEPSKSLNQVCTMHANCCYGMDSKLHDLRIMLEDWRKFM 537
            PFI  IGL MRFL+TA+FGGLCEPSK LN V TMHANCC+G++SKLHDLRIML+DW+++M
Sbjct: 315  PFIMNIGLEMRFLDTAHFGGLCEPSKDLNLVSTMHANCCFGLESKLHDLRIMLQDWKEYM 374

Query: 536  TLPPSVKRASLSSWRIPQNC 477
            +LPPS+KR+S ++WR+PQNC
Sbjct: 375  SLPPSLKRSSEATWRVPQNC 394


>ref|XP_004149471.1| PREDICTED: uncharacterized protein At4g15970-like [Cucumis sativus]
          Length = 350

 Score =  468 bits (1205), Expect = e-129
 Identities = 219/335 (65%), Positives = 269/335 (80%), Gaps = 8/335 (2%)
 Frame = -2

Query: 1457 MLFFAAVAFPCLVIYQAASSFQSIPRSSSTIVIDHSTLDT--------TNSTSEPDEVRL 1302
            +L F A++  CLVI +  +S +  P  S +       L           + + E DE  L
Sbjct: 14   LLLFTAISLSCLVILRELNSLRYFPLFSFSTSSGPPPLPPFLLSLPHHDHLSPEADEYGL 73

Query: 1301 DRVLKEASMDDGTVILTTLNEAWAASDSIIDLFLESFRIGNQTHRLLKHLVIITLDRKAY 1122
            D+VLK+A+ +D TVILTTLNEAWA+ +++IDLFL+SFRIGN+TH+LL HLVII LD+KA+
Sbjct: 74   DKVLKDAATEDKTVILTTLNEAWASPNAVIDLFLQSFRIGNRTHQLLDHLVIIALDKKAF 133

Query: 1121 IRCLGLHTHCFALTTEGLDFSKEAYFMTPDYLKMMWRRIDFLRSVLEMGYNFVFTDADVM 942
            +RCL +H HC +L TEG+DF  EAYFM+PDYLKMMWRRIDFLR+VLEMGYNFVFTDADVM
Sbjct: 134  MRCLDIHIHCVSLVTEGVDFRSEAYFMSPDYLKMMWRRIDFLRTVLEMGYNFVFTDADVM 193

Query: 941  WFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNYVKSNNRTIAFYKYWYSSRETH 762
            WFRDPFP F ++ADFQIACD ++G   DL+N+PNGGFNYVKSNNR+I FYKYWYS+RET+
Sbjct: 194  WFRDPFPFFDINADFQIACDQYLGIPDDLDNRPNGGFNYVKSNNRSIEFYKYWYSARETY 253

Query: 761  PGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEPSKSLNQVCTMHANCCYGMDSK 582
            PGYHDQDVLN IK+D FI EIGL +RFL+TAYFGG CEPSK LN+V TMHANCC GMDSK
Sbjct: 254  PGYHDQDVLNRIKYDFFIEEIGLKIRFLDTAYFGGFCEPSKDLNRVLTMHANCCIGMDSK 313

Query: 581  LHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 477
            LHDLRI+LEDW+ +M++PP +K +S+ SWR+PQNC
Sbjct: 314  LHDLRILLEDWKHYMSMPPYLKTSSIQSWRVPQNC 348


>ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]
          Length = 436

 Score =  467 bits (1202), Expect = e-129
 Identities = 226/341 (66%), Positives = 268/341 (78%), Gaps = 15/341 (4%)
 Frame = -2

Query: 1454 LFFAAVAFPCLVIYQAA--SSF-QSIPRSSSTIVI---DHSTLDTTNSTSE--------- 1320
            L F  V+  C+++++ A  S F  S P S  T V    D + L       E         
Sbjct: 49   LLFFLVSLSCVLLFRNAYYSVFVSSNPLSRFTTVFPPNDSAALSGIEKLFEVGLDERILV 108

Query: 1319 PDEVRLDRVLKEASMDDGTVILTTLNEAWAASDSIIDLFLESFRIGNQTHRLLKHLVIIT 1140
             +E  L+ +L EA+M D TVILTTLNEAWAA +SIIDLFLESFRIG+ T RLL HLVII 
Sbjct: 109  TNEYSLENILSEAAMQDRTVILTTLNEAWAAPNSIIDLFLESFRIGDHTRRLLNHLVIIA 168

Query: 1139 LDRKAYIRCLGLHTHCFALTTEGLDFSKEAYFMTPDYLKMMWRRIDFLRSVLEMGYNFVF 960
            LD+KA+IRC  +HT+C+ L +E  DF +EAYFMTP YLKMMWRRIDFLRSVLEMGYNFVF
Sbjct: 169  LDQKAFIRCQAIHTYCYLLVSEATDFHEEAYFMTPSYLKMMWRRIDFLRSVLEMGYNFVF 228

Query: 959  TDADVMWFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNYVKSNNRTIAFYKYWY 780
            TDAD+MWFRDPFPRF+ DADFQIACDHF G+  D+ N+PNGGFN+VKSNNR+I FYK+WY
Sbjct: 229  TDADIMWFRDPFPRFHRDADFQIACDHFTGSFDDVQNRPNGGFNFVKSNNRSIEFYKFWY 288

Query: 779  SSRETHPGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEPSKSLNQVCTMHANCC 600
            SSRET+PGYHDQDVLN IK DPFIT++GL M+FL+TA FGGLCEPS+ LN+VCTMHANCC
Sbjct: 289  SSRETYPGYHDQDVLNFIKVDPFITDLGLRMKFLDTANFGGLCEPSRDLNKVCTMHANCC 348

Query: 599  YGMDSKLHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 477
            YGMDSKLHDLRIML+DW+ ++TL PS+KR S+ SWR+PQNC
Sbjct: 349  YGMDSKLHDLRIMLQDWKYYLTLSPSLKRLSIISWRVPQNC 389


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