BLASTX nr result

ID: Coptis21_contig00015247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015247
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera...   106   2e-21
emb|CAN70144.1| hypothetical protein VITISV_029929 [Vitis vinifera]   106   2e-21
ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativu...    92   6e-17
ref|NP_001240868.1| uncharacterized protein LOC100812665 [Glycin...    87   2e-15
ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group] g...    85   7e-15

>ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera]
           gi|297737602|emb|CBI26803.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/103 (51%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   EKTRLAFVVAEQKATSASSAILNNQYISTGASWVSGAISKVARAAEDVSLMTQXXXXXXX 180
           EKT+ A  +AEQKA+ A SAI+NN Y++TGASWVS A+S V +AAEDVS+MT+       
Sbjct: 206 EKTKSALAIAEQKASIAGSAIMNNHYVATGASWVSSALSMVTKAAEDVSVMTREKVGRAE 265

Query: 181 XXXXDILYKETTGVVSDFARLQLDESPAA-PPVVPLDNSIDGK 306
               +I+Y+E  G V+++A++ LDESPA  PP+VP+D+  D K
Sbjct: 266 EEKKEIIYREKMGFVNEYAQIHLDESPAGEPPIVPVDSVDDCK 308


>emb|CAN70144.1| hypothetical protein VITISV_029929 [Vitis vinifera]
          Length = 399

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/103 (52%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   EKTRLAFVVAEQKATSASSAILNNQYISTGASWVSGAISKVARAAEDVSLMTQXXXXXXX 180
           EKT+ A  +AEQKA+ A SAI+NN Y++TGASWVS A+S V +AAEDVS+MT+       
Sbjct: 293 EKTKSALAIAEQKASIAGSAIMNNHYVATGASWVSSALSMVTKAAEDVSVMTREKVXRAE 352

Query: 181 XXXXDILYKETTGVVSDFARLQLDESPAA-PPVVPLDNSIDGK 306
               +I+Y+E  G V+++A++ LDESPA  PP+VP+D+  D K
Sbjct: 353 EEKKEIIYREKMGFVNEYAQIHLDESPAGEPPIVPVDSVDDCK 395


>ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativus]
           gi|449523840|ref|XP_004168931.1| PREDICTED: protein
           vip1-like [Cucumis sativus]
          Length = 278

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   EKTRLAFVVAEQKATSASSAILNNQYISTGASWVSGAISKVARAAEDVSLMTQXXXXXXX 180
           EKT+ A  VAEQKATSA +A+++N Y+ TGA+W S A++ V +AAE+V+ MT+       
Sbjct: 178 EKTKSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAE 237

Query: 181 XXXXDILYKETTGVVSDFARLQLDES-PAAPPVVPLDNS 294
               + +Y+E TG++S+FA L LDE  P  P +VP++++
Sbjct: 238 EEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSA 276


>ref|NP_001240868.1| uncharacterized protein LOC100812665 [Glycine max]
           gi|255642433|gb|ACU21480.1| unknown [Glycine max]
          Length = 310

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   EKTRLAFVVAEQKATSASSAILNNQYISTGASWVSGAISKVARAAEDVSLMTQXXXXXXX 180
           E T+ A   AEQKA+SA SAI++N Y+ +GASW S A + +A+AAEDVS MT+       
Sbjct: 203 EMTKSAMAAAEQKASSAGSAIMSNPYVKSGASWFSSAFTAIAKAAEDVSTMTKEKVEQAV 262

Query: 181 XXXXDILYKETTGVVSDFARLQLDE-SPAAPPVVPLDNSIDGK 306
               +I+Y E  G V +FA+  L+E S   P VVP+++  D K
Sbjct: 263 VERNEIIYGERKGTVDEFAKTHLEEASDIGPAVVPVNSDDDRK 305


>ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group]
           gi|18071362|gb|AAL58221.1|AC090882_24 putative splicing
           regulatory protein [Oryza sativa Japonica Group]
           gi|108710741|gb|ABF98536.1| RRM-containing protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549544|dbj|BAF12987.1| Os03g0713600 [Oryza sativa
           Japonica Group]
          Length = 284

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   EKTRLAFVVAEQKATSASSAILNNQYISTGASWVSGAISKVARAAEDVSLMTQXXXXXXX 180
           E T+ A   AEQKA+ ASSAI+NNQY+S GASW++ A   V +AA D+S MT+       
Sbjct: 178 ELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAE 237

Query: 181 XXXXDILYKETTGVVSDFARLQLDE-SPAAPPVVPLDN 291
                I+++E  G+VSD+A++ LDE S   P V+PL++
Sbjct: 238 EERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLES 275


Top