BLASTX nr result

ID: Coptis21_contig00015241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015241
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [V...    73   2e-11
emb|CBI30256.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]    73   2e-11

>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = -1

Query: 218 RYSGDQPQEN-ESIDQLVITIGRVNPARLASMEEKILAMPKLLSNSAGQNSCCIFRVPQS 42
           R  GDQ QEN E+ +  V +I   +   L S+E+K   +PKLL  SAG++SCCIFRVPQS
Sbjct: 6   RLIGDQSQENAETSNDHVTSITEADRQWLKSVEKKTKLLPKLLKKSAGKSSCCIFRVPQS 65

Query: 41  LVQINPQAYHPHI 3
           LV+IN +AYHPHI
Sbjct: 66  LVEINKKAYHPHI 78


>ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = -1

Query: 218 RYSGDQPQENESI-DQLVITIGRVNPARLASMEEKILAMPKLLSNSAGQNSCCIFRVPQS 42
           R+ GDQ QEN    D  V +I   +   L S+E K   +PKLL+NSAG++SCCIFRVPQS
Sbjct: 6   RFIGDQIQENAGTSDDHVTSITEADRQWLKSVETKTKLLPKLLNNSAGKSSCCIFRVPQS 65

Query: 41  LVQINPQAYHPHI 3
           L +IN  AY PHI
Sbjct: 66  LFEINKMAYQPHI 78


>ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 442

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 ESIDQLVITIGRVNPARLASMEEKILAMPKLLSNSAGQNSCCIFRVPQSLVQINPQAYHP 9
           ES + +V+ I  VN  RLA M++KI   P+LL  SAG++SCCIFRVP++LV+IN ++Y P
Sbjct: 4   ESNNDVVVRIWEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQP 63

Query: 8   HI 3
           HI
Sbjct: 64  HI 65


>emb|CBI30256.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 ESIDQLVITIGRVNPARLASMEEKILAMPKLLSNSAGQNSCCIFRVPQSLVQINPQAYHP 9
           ES + +V+ I  VN  RLA M++KI   P+LL  SAG++SCCIFRVP++LV+IN ++Y P
Sbjct: 3   ESNNDVVVRIWEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQP 62

Query: 8   HI 3
           HI
Sbjct: 63  HI 64


>emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]
          Length = 441

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 ESIDQLVITIGRVNPARLASMEEKILAMPKLLSNSAGQNSCCIFRVPQSLVQINPQAYHP 9
           ES + +V+ I  VN  RLA M++KI   P+LL  SAG++SCCIFRVP++LV+IN ++Y P
Sbjct: 3   ESNNDVVVRIWEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQP 62

Query: 8   HI 3
           HI
Sbjct: 63  HI 64


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